Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdk8

Gene Name Gene ID Reads Annotation
cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]










Genes with expression patterns similar to cdk8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
2. hnrpl 6412 2.414 0.913 - 0.750 - - - 0.751 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
3. st13 ENSDARG00000021973 7787 2.357 - 0.824 0.702 - - - - 0.831 - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
4. ddx42 ENSDARG00000037928 1659 1.941 - 0.993 - - - - - 0.948 - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
5. snx27b ENSDARG00000016977 2768 1.94 - 0.991 - - - - - 0.949 - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
6. shda ENSDARG00000094243 929 1.94 - 0.992 - - - - - 0.948 - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
7. neo1 neo1 4056 1.911 0.972 - - - - - - 0.939 -
8. mrpl19 ENSDARG00000011885 2208 1.893 0.948 - - - - - - 0.945 - mitochondrial ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040801-55]
9. mrpl14 ENSDARG00000068886 1991 1.89 - 0.996 - - - - - - 0.894 mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
10. rapgef2 ENSDARG00000005482 2586 1.886 - 0.994 - - - - - 0.892 - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
11. atp2a3 ENSDARG00000060978 1408 1.863 - - - - - - - 0.954 0.909 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
12. rbm8a ENSDARG00000016516 8789 1.85 0.924 - - - - - - - 0.926 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
13. gorasp1 gorasp1 3075 1.848 0.927 - - - - - - - 0.921
14. atp2b4 5891 1.833 0.902 0.931 - - - - - - - ATPase, Ca++ transporting, plasma membrane 4
15. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.831 0.929 - - - - - - - 0.902 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
16. mfn1b ENSDARG00000079219 1699 1.816 - - - - - - - 0.955 0.861 mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
17. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.793 - - - - - - - 0.915 0.878 cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
18. sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 1.778 - 0.989 - - - 0.789 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]
19. xylt1 ENSDARG00000061248 2357 1.764 - 0.992 - - - - - - 0.772 xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
20. DEAF1 ENSDARG00000088844 380 1.761 - - - - - - 0.796 0.965 - DEAF1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-081022-163]
21. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.759 - - - - - - - 0.924 0.835 phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
22. golgb1 ENSDARG00000061951 2023 1.756 - - - - - - - 0.843 0.913 golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
23. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 1.755 0.780 0.975 - - - - - - - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
24. acsbg1 ENSDARG00000062077 2020 1.753 - 0.988 - - - - - - 0.765 acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
25. sf3b2 ENSDARG00000018049 4675 1.751 - - - - - - - 0.968 0.783 splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
26. zgc:153675 ENSDARG00000071555 3769 1.747 0.909 - - - - - - 0.838 - zgc:153675 [Source:ZFIN;Acc:ZDB-GENE-061013-567]
27. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.726 0.942 - - - - - - - 0.784 vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
28. zgc:66479 ENSDARG00000008732 3347 1.726 0.924 - - - - - - 0.802 - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
29. ndufb10 ENSDARG00000028889 7680 1.722 0.883 0.839 - - - - - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:ZFIN;Acc:ZDB-GENE-040426-1691]
30. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.707 0.925 - - - - - 0.782 - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
31. smarca5 ENSDARG00000052348 15433 1.704 0.847 - - - - - - 0.857 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
32. tmem258 ENSDARG00000078785 9578 1.688 0.834 - - - - - - - 0.854 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
33. gna13b ENSDARG00000037924 1963 1.681 - - - - - - 0.780 - 0.901 guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
34. oaz1a ENSDARG00000071403 21112 1.668 0.871 - - - - - - - 0.797 ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
35. eno3 ENSDARG00000039007 11355 1.668 0.953 - - - - - - 0.715 - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
36. slc38a7 ENSDARG00000012002 2219 1.666 0.760 - - - - - - 0.906 - solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
37. b3gnt2b ENSDARG00000091902 4125 1.664 0.817 - - - - - - - 0.847 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
38. ubqln4 ENSDARG00000052975 6453 1.66 0.781 0.879 - - - - - - - ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
39. fmoda ENSDARG00000044895 1835 1.659 - - - - - - 0.767 0.892 - fibromodulin a [Source:ZFIN;Acc:ZDB-GENE-041008-23]
40. xpot ENSDARG00000099652 3026 1.642 0.932 - 0.710 - - - - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
41. mybphb ENSDARG00000003081 5208 1.641 0.911 - - - - - - 0.730 - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
42. helz ENSDARG00000030560 3259 1.638 - - - - - - - 0.865 0.773 helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
43. slc16a12b ENSDARG00000089885 3744 1.63 0.842 - - - - - - - 0.788 solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
44. narfl ENSDARG00000062216 768 1.628 - - - - - - 0.721 - 0.907 nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
45. rbm4.2 ENSDARG00000055080 5241 1.628 0.905 - 0.723 - - - - - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
46. u2surp ENSDARG00000061490 2814 1.628 - - - - - - 0.732 - 0.896 U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
47. TNPO2 ENSDARG00000042887 2290 1.619 - - 0.739 - - - - 0.880 - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
48. anxa4 ENSDARG00000036456 3332 1.618 - - - - - - - 0.766 0.852 annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
49. ints10 ENSDARG00000043031 455 1.612 - - - - - - 0.710 - 0.902 integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
50. cyc1 ENSDARG00000038075 16699 1.592 - 0.806 - - - - - 0.786 - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
51. mastl ENSDARG00000055566 1487 1.582 - - - - - - - 0.702 0.880 microtubule associated serine/threonine kinase-like [Source:ZFIN;Acc:ZDB-GENE-040801-128]
52. bri3 ENSDARG00000086332 8405 1.58 - - - - - - - 0.863 0.717 brain protein I3 [Source:ZFIN;Acc:ZDB-GENE-030131-3038]
53. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.558 - - - - - 0.736 - - 0.822 limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
54. sox4b ENSDARG00000098834 1634 1.546 - - - - - - 0.815 0.731 - SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
55. cbfa2t2 ENSDARG00000074337 4323 1.473 - - - - - - 0.743 0.730 - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
56. ivns1abpb ENSDARG00000013946 1972 1.453 - - 0.710 - - - 0.743 - - influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]
57. ilf2 ENSDARG00000014591 14543 1.408 - 0.707 0.701 - - - - - - interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
58. rsu1 ENSDARG00000102885 3604 0.997 - 0.997 - - - - - - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
59. ube2f ENSDARG00000025754 1946 0.996 - 0.996 - - - - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
60. sar1ab ENSDARG00000033320 3984 0.996 - 0.996 - - - - - - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
61. smarce1 ENSDARG00000016871 9628 0.995 - 0.995 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
62. hhatlb ENSDARG00000005139 6674 0.995 - 0.995 - - - - - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
63. ldha ENSDARG00000101251 10868 0.995 - 0.995 - - - - - - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
64. pim1 ENSDARG00000100020 7035 0.995 - 0.995 - - - - - - - Pim-1 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-061013-139]
65. kpna5 ENSDARG00000042030 1643 0.994 - 0.994 - - - - - - - karyopherin alpha 5 (importin alpha 6) [Source:ZFIN;Acc:ZDB-GENE-050522-22]
66. cks1b ENSDARG00000007971 2739 0.994 - 0.994 - - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
67. nubp1 ENSDARG00000055472 1182 0.994 - 0.994 - - - - - - - nucleotide binding protein 1 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-050417-471]
68. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 0.994 - 0.994 - - - - - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
69. ccnc ENSDARG00000009607 1240 0.993 - 0.993 - - - - - - - cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
70. setbp1 ENSDARG00000093799 4499 0.993 - 0.993 - - - - - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
71. tra2b ENSDARG00000002168 3218 0.993 - 0.993 - - - - - - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
72. wu:fb54a03 wu:fb54a03 1722 0.993 - 0.993 - - - - - - -
73. samm50l ENSDARG00000039681 2465 0.993 - 0.993 - - - - - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
74. esrrga ENSDARG00000004861 805 0.993 - 0.993 - - - - - - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
75. suv39h1b ENSDARG00000055753 1540 0.993 - 0.993 - - - - - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
76. prosc 925 0.993 - 0.993 - - - - - - - pyridoxal phosphate binding protein, transcript variant X1
77. psmd11a ENSDARG00000060150 4529 0.993 - 0.993 - - - - - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
78. gfap ENSDARG00000025301 5584 0.993 - 0.993 - - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
79. phldb1a ENSDARG00000061093 1637 0.993 - 0.993 - - - - - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
80. ahsa1l ahsa1l 2366 0.993 - 0.993 - - - - - - -
81. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 0.992 - 0.992 - - - - - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
82. sema4ba ENSDARG00000074414 1194 0.992 - 0.992 - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba [Source:ZFIN;Acc:ZDB-GENE-070705-31]
83. nkain1 ENSDARG00000006859 1961 0.992 - 0.992 - - - - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
84. MTMR11 ENSDARG00000069755 917 0.992 - 0.992 - - - - - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
85. CABZ01079490.1 CABZ01079490.1 1808 0.992 - 0.992 - - - - - - -
86. dyrk1ab ENSDARG00000023814 1769 0.992 - 0.992 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
87. ppfibp2b ENSDARG00000029168 961 0.992 - 0.992 - - - - - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
88. WDR81 ENSDARG00000079702 822 0.992 - 0.992 - - - - - - - WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
89. ctage5 530 0.992 - 0.992 - - - - - - - CTAGE family, member 5, transcript variant X8
90. emc3 ENSDARG00000020607 3406 0.992 - 0.992 - - - - - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
91. zgc:111974 zgc:111974 1386 0.992 - 0.992 - - - - - - -
92. angptl3 ENSDARG00000044365 574 0.992 - 0.992 - - - - - - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
93. trnau1apa ENSDARG00000101323 911 0.992 - 0.992 - - - - - - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
94. pdcd5 ENSDARG00000026072 3135 0.992 - 0.992 - - - - - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
95. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 0.991 - 0.991 - - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
96. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 0.991 - 0.991 - - - - - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
97. eya2 ENSDARG00000018984 1768 0.991 - 0.991 - - - - - - - EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
98. rbm14b ENSDARG00000103834 1597 0.991 - 0.991 - - - - - - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
99. gpd1c ENSDARG00000036942 869 0.991 - 0.991 - - - - - - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
100. wu:fi42e03 ENSDARG00000070709 276 0.991 - 0.991 - - - - - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]

There are 1050 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA