Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdk7

Gene Name Gene ID Reads Annotation
cdk7 ENSDARG00000051916 746 cyclin-dependent kinase 7 [Source:ZFIN;Acc:ZDB-GENE-010320-2]










Genes with expression patterns similar to cdk7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk7 ENSDARG00000051916 746 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase 7 [Source:ZFIN;Acc:ZDB-GENE-010320-2]
2. C12H10orf118 C12H10orf118 964 2.441 - 0.740 - - - - 0.742 0.959 -
3. spc25 ENSDARG00000078433 1316 1.83 - - - - - - 0.873 0.957 - SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-13]
4. aebp1 ENSDARG00000091726 906 1.793 - - - - - - 0.824 0.969 - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
5. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.781 - - - - - - 0.846 0.935 - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
6. plk4 ENSDARG00000004576 688 1.753 - - - - - - 0.764 0.989 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
7. MDFIC ENSDARG00000074223 781 1.747 - - - - - - 0.764 0.983 - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
8. dennd5a ENSDARG00000017006 3426 1.73 - - - - - - 0.746 0.984 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
9. si:ch211-207m11.3 si:ch211-207m11.3 401 1.723 - - - - - - 0.797 0.926 -
10. si:ch211-194k22.8 ENSDARG00000096711 1318 1.714 - - - - - - 0.756 0.958 - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
11. GANAB_1 GANAB_1 685 1.713 - - - - - - 0.725 0.988 -
12. NAIF1_1 NAIF1_1 1336 1.694 - - - - - - 0.745 0.949 -
13. cox14 ENSDARG00000092124 2229 1.687 - 0.748 - - - - - 0.939 - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
14. b4galt7 ENSDARG00000021899 546 1.681 - - - - - - 0.707 0.974 - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
15. psma2 ENSDARG00000040121 2504 1.678 - - - - - - 0.759 0.919 - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
16. impdh1b ENSDARG00000029524 7472 1.641 - 0.719 - - - - - 0.922 - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
17. u2af2a ENSDARG00000012505 2920 1.635 - - - - - 0.775 0.860 - - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
18. taf11 ENSDARG00000037855 2624 1.632 - - - - - - 0.746 0.886 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
19. ptges3b ENSDARG00000089626 5666 1.62 - - - - - - 0.842 0.778 - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
20. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.6 - - - - - - 0.773 0.827 - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
21. rbm8a ENSDARG00000016516 8789 1.596 - - - - - - 0.709 0.887 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
22. POLR3D ENSDARG00000104516 393 1.54 - 0.704 - - - - 0.836 - - polymerase (RNA) III (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040426-1017]
23. spsb3a ENSDARG00000077737 527 1.531 - - - - - 0.778 0.753 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
24. klhl11 ENSDARG00000045130 800 1.526 - 0.727 - - - - 0.799 - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
25. sdhaf2 ENSDARG00000062971, ENSDARG00000114840 1320 1.478 - 0.721 - - - - 0.757 - - succinate dehydrogenase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7564]
26. ube2g1b ENSDARG00000069527 5376 1.468 - 0.702 - - - - 0.766 - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
27. cbx4 ENSDARG00000099441 372 1.436 - 0.705 - - - - 0.731 - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
28. polr2d ENSDARG00000076509 3386 1.423 - - - - - - 0.711 - 0.712 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
29. scmh1 ENSDARG00000104311, ENSDARG00000110119 413 0.999 - - - - - - - 0.999 - Scm polycomb group protein homolog 1 [Source:ZFIN;Acc:ZDB-GENE-070410-82]
30. LPL_1 LPL_1 1150 0.998 - - - - - - - 0.998 -
31. zgc:171220 ENSDARG00000102959 164 0.998 - - - - - - - 0.998 - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
32. LTN1 ENSDARG00000003984 1076 0.995 - - - - - - - 0.995 - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
33. TDG TDG 1191 0.993 - - - - - - - 0.993 -
34. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.992 - - - - - - - 0.992 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
35. KIRREL3 ENSDARG00000115903 206 0.992 - - - - - - - 0.992 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
36. ZNF784_2 ZNF784_2 181 0.992 - - - - - - - 0.992 -
37. grna ENSDARG00000004954 189 0.992 - - - - - - - 0.992 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
38. chd5 ENSDARG00000105083 132 0.992 - - - - - - - 0.992 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
39. BX322612.1 BX322612.1 236 0.992 - - - - - - - 0.992 -
40. eef1a1a ENSDARG00000039502 234 0.992 - - - - - - - 0.992 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
41. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.992 - - - - - - - 0.992 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
42. XKR7 ENSDARG00000026333 175 0.992 - - - - - - - 0.992 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
43. anapc5 ENSDARG00000008461 434 0.992 - - - - - - - 0.992 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
44. xkr6 xkr6 286 0.992 - - - - - - - 0.992 -
45. zgc:171727 ENSDARG00000105781 350 0.992 - - - - - - - 0.992 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
46. ift20 ENSDARG00000040556 285 0.992 - - - - - - - 0.992 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
47. rapgef1a ENSDARG00000043593 416 0.991 - - - - - - - 0.991 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
48. lrrc4.2 ENSDARG00000003020 235 0.991 - - - - - - - 0.991 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
49. SIPA1L3 ENSDARG00000061699 268 0.991 - - - - - - - 0.991 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
50. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.991 - - - - - - - 0.991 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
51. nkain4 ENSDARG00000062699 377 0.991 - - - - - - - 0.991 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
52. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.991 - - - - - - - 0.991 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
53. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 0.991 - - - - - - - 0.991 - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
54. TTC28 ENSDARG00000114920 580 0.991 - - - - - - - 0.991 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
55. wdr92 ENSDARG00000037334 329 0.991 - - - - - - - 0.991 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
56. sh3bp5a ENSDARG00000100529 642 0.991 - - - - - - - 0.991 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
57. ppp1r8 ppp1r8 310 0.991 - - - - - - - 0.991 -
58. psmd5 ENSDARG00000059046 622 0.991 - - - - - - - 0.991 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
59. DEDD ENSDARG00000029783 530 0.991 - - - - - - - 0.991 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
60. map7d2b ENSDARG00000045316 702 0.99 - - - - - - - 0.990 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
61. THEM4 ENSDARG00000061621 364 0.99 - - - - - - - 0.990 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
62. SB:CB827 SB:CB827 245 0.99 - - - - - - - 0.990 -
63. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.99 - - - - - - - 0.990 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
64. bsk146 ENSDARG00000099069 274 0.99 - - - - - - - 0.990 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
65. pold3 ENSDARG00000076169 694 0.99 - - - - - - - 0.990 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
66. sgsm3 ENSDARG00000019038 352 0.99 - - - - - - - 0.990 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
67. dok7 ENSDARG00000060236 364 0.99 - - - - - - - 0.990 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
68. mapre3b ENSDARG00000102878 362 0.99 - - - - - - - 0.990 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
69. ezh1 ENSDARG00000037894 294 0.989 - - - - - - - 0.989 - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
70. tchp ENSDARG00000035605 1695 0.989 - - - - - - - 0.989 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
71. ndnl2 ENSDARG00000058212 1042 0.989 - - - - - - - 0.989 - necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]
72. si:ch211-195b13.1 ENSDARG00000016623 427 0.989 - - - - - - - 0.989 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
73. irf2a ENSDARG00000007387 915 0.989 - - - - - - - 0.989 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
74. cetn2 ENSDARG00000101510 541 0.989 - - - - - - - 0.989 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
75. ghitm 1443 0.989 - - - - - - - 0.989 - growth hormone inducible transmembrane protein
76. wdr47a ENSDARG00000078136 522 0.989 - - - - - - - 0.989 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
77. MANEAL ENSDARG00000056450 262 0.989 - - - - - - - 0.989 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
78. CR354611.2 CR354611.2 2040 0.988 - - - - - - - 0.988 -
79. epb41a ENSDARG00000099283 860 0.988 - - - - - - - 0.988 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
80. CABZ01073424.1 ENSDARG00000107858 688 0.988 - - - - - - - 0.988 -
81. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.988 - - - - - - - 0.988 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
82. DVL3 1098 0.988 - - - - - - - 0.988 - dishevelled segment polarity protein 3
83. ankrd10b ENSDARG00000004771 654 0.987 - - - - - - - 0.987 - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
84. LDLRAD4 LDLRAD4 1237 0.987 - - - - - - - 0.987 -
85. PRRT2 ENSDARG00000103588 913 0.987 - - - - - - - 0.987 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
86. rnf216 ENSDARG00000087893 518 0.987 - - - - - - - 0.987 - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
87. fzd3b ENSDARG00000058692 627 0.987 - - - - - - - 0.987 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
88. E2F1 ENSDARG00000103868 638 0.987 - - - - - - - 0.987 - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
89. ank3a ENSDARG00000061736 361 0.987 - - - - - - - 0.987 - ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]
90. brd1a ENSDARG00000013596, ENSDARG00000116694 547 0.986 - - - - - - - 0.986 - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
91. atp6v1d ENSDARG00000011175 8331 0.986 - - - - - - - 0.986 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
92. fstl5 ENSDARG00000040198 213 0.986 - - - - - - - 0.986 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
93. suco ENSDARG00000016532 1609 0.985 - - - - - - - 0.985 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
94. B3GNT1 B3GNT1 601 0.985 - - - - - - - 0.985 -
95. si:ch211-113a14.18 ENSDARG00000051735 1253 0.985 - - - - - - - 0.985 - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
96. tnika ENSDARG00000056218 728 0.985 - - - - - - - 0.985 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
97. med20 ENSDARG00000046006 614 0.985 - - - - - - - 0.985 - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
98. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.985 - - - - - - - 0.985 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
99. ift46 ENSDARG00000011240 2499 0.985 - - - - - - - 0.985 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
100. PRKDC ENSDARG00000075083 693 0.985 - - - - - - - 0.985 - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]

There are 947 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA