Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdk5rap3

Gene Name Gene ID Reads Annotation
cdk5rap3 ENSDARG00000045092, ENSDARG00000115530 717 CDK5 regulatory subunit associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040625-90]










Genes with expression patterns similar to cdk5rap3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk5rap3 ENSDARG00000045092, ENSDARG00000115530 717 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDK5 regulatory subunit associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040625-90]
2. azi1_1 azi1_1 1375 1.704 - - - 0.882 - 0.822 - - -
3. cacng6a ENSDARG00000036457 344 1.683 - - - 0.876 - - 0.807 - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
4. gga3 ENSDARG00000103667 675 1.609 - - - - - - 0.905 - 0.704 ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
5. ppp1r11 ENSDARG00000036063 587 1.6 - - - 0.840 - - 0.760 - - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
6. hibch ENSDARG00000054867 885 1.581 - 0.842 - 0.739 - - - - - 3-hydroxyisobutyryl-CoA hydrolase [Source:ZFIN;Acc:ZDB-GENE-050327-29]
7. trpv4 ENSDARG00000061941 297 1.572 - - - 0.871 - - 0.701 - - transient receptor potential cation channel, subfamily V, member 4 [Source:ZFIN;Acc:ZDB-GENE-030912-7]
8. rcan1b 556 1.565 - 0.793 - 0.772 - - - - - regulator of calcineurin 1b
9. fgfr1op2 ENSDARG00000009657 904 1.547 - 0.843 - - - - 0.704 - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
10. asb2b ENSDARG00000102490 311 1.541 - 0.718 - 0.823 - - - - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
11. pik3r3a ENSDARG00000103038 1132 1.529 - 0.794 - 0.735 - - - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
12. mir199-3 mir199-3 826 1.528 - - 0.713 - - 0.815 - - -
13. MDFIC ENSDARG00000074223 781 1.526 - - - 0.803 - 0.723 - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
14. cpsf2 ENSDARG00000028971 841 1.522 - 0.788 - 0.734 - - - - - cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]
15. SGPP1 ENSDARG00000060534 1802 1.485 - 0.757 - - - 0.728 - - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
16. agpat3 ENSDARG00000036549 1093 1.476 - - - 0.732 - - 0.744 - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
17. TMEM179B ENSDARG00000069495 1074 1.464 - - - 0.747 - 0.717 - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
18. fpgt ENSDARG00000042139 155 1.45 - - - - - 0.739 - - 0.711 fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
19. eif4ebp3 ENSDARG00000054916 583 1.443 - 0.727 - - - 0.716 - - - eukaryotic translation initiation factor 4E binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-44]
20. nom1 ENSDARG00000060027, ENSDARG00000112720 831 1.439 - - - 0.716 - - 0.723 - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
21. aass ENSDARG00000051816 3795 1.433 0.711 0.722 - - - - - - - aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
22. strn4 ENSDARG00000102902 24 0.955 - - - 0.955 - - - - - striatin, calmodulin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-070501-3]
23. BX323449.2 BX323449.2 50 0.955 - - - 0.955 - - - - -
24. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 0.955 - - - 0.955 - - - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
25. TRPM6 ENSDARG00000103454 15 0.955 - - - 0.955 - - - - - transient receptor potential cation channel, subfamily M, member 6 [Source:ZFIN;Acc:ZDB-GENE-111212-1]
26. zgc:162180 zgc:162180 31 0.953 - - - 0.953 - - - - -
27. SLC39A8 ENSDARG00000056757 52 0.953 - - - 0.953 - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
28. zgc:92880 zgc:92880 56 0.952 - - - 0.952 - - - - -
29. zgc:153345 ENSDARG00000055622 29 0.95 - - - 0.950 - - - - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
30. MAP3K6 MAP3K6 181 0.949 - - - 0.949 - - - - -
31. vti1b ENSDARG00000039270 295 0.949 - - - 0.949 - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]
32. fer ENSDARG00000012196 83 0.949 - - - 0.949 - - - - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
33. fam151a ENSDARG00000058218 40 0.948 - - - 0.948 - - - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
34. rab4a ENSDARG00000019144 192 0.948 - - - 0.948 - - - - - RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
35. ZBTB22 ZBTB22 1053 0.947 - - - 0.947 - - - - -
36. porcn ENSDARG00000052558, ENSDARG00000111556 110 0.946 - - - 0.946 - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
37. fkbp10a ENSDARG00000099183 314 0.946 - - - 0.946 - - - - - FK506 binding protein 10a [Source:ZFIN;Acc:ZDB-GENE-100921-75]
38. gulp1b ENSDARG00000057833 382 0.944 - - - 0.944 - - - - - GULP, engulfment adaptor PTB domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-120228-2]
39. si:dkey-15h14.4 si:dkey-15h14.4 118 0.943 - - - 0.943 - - - - -
40. myo1f ENSDARG00000078734 100 0.942 - - - 0.942 - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
41. pdk4 ENSDARG00000054848 258 0.941 - - - 0.941 - - - - - pyruvate dehydrogenase kinase, isozyme 4 [Source:ZFIN;Acc:ZDB-GENE-060503-754]
42. fasn ENSDARG00000087657 99 0.941 - - - 0.941 - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
43. zgc:153615 ENSDARG00000038981 105 0.939 - - - 0.939 - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
44. GAB3 GAB3 72 0.937 - - - 0.937 - - - - -
45. LRFN2 118 0.936 - - - 0.936 - - - - - leucine rich repeat and fibronectin type III domain containing 2
46. tmco4 ENSDARG00000078924 330 0.936 - - - 0.936 - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
47. CABZ01067743.1 CABZ01067743.1 48 0.936 - - - 0.936 - - - - -
48. cc2d1b ENSDARG00000099445 253 0.935 - - - 0.935 - - - - - coiled-coil and C2 domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-1426]
49. mettl20 56 0.934 - - - 0.934 - - - - - methyltransferase like 20
50. si:dkey-263m6.1 si:dkey-263m6.1 140 0.934 - - - 0.934 - - - - -
51. mid1 ENSDARG00000060482 154 0.931 - - - 0.931 - - - - - midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]
52. si:ch211-213a13.1 ENSDARG00000090600 381 0.931 - - - 0.931 - - - - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
53. CABZ01102038.1 ENSDARG00000116210 132 0.93 - - - 0.930 - - - - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
54. alkbh2 ENSDARG00000059856, ENSDARG00000115064 97 0.93 - - - 0.930 - - - - - alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-060526-327]
55. gpr137 ENSDARG00000037244 801 0.928 - - - 0.928 - - - - - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
56. dtnbb ENSDARG00000013020 280 0.926 - - - 0.926 - - - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
57. igsf21a ENSDARG00000031049 165 0.922 - - - 0.922 - - - - - immunoglobin superfamily, member 21a [Source:ZFIN;Acc:ZDB-GENE-050809-118]
58. napepld ENSDARG00000009252 228 0.922 - - - 0.922 - - - - - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
59. DUSP26 ENSDARG00000103752 404 0.92 - - - 0.920 - - - - - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
60. matk ENSDARG00000074670 225 0.918 - - - 0.918 - - - - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
61. CU019624.1 ENSDARG00000103960 273 0.918 - - - 0.918 - - - - -
62. CR376785.2 CR376785.2 175 0.916 - - - 0.916 - - - - -
63. tuft1a ENSDARG00000061242, ENSDARG00000115368 330 0.916 - - - 0.916 - - - - - tuftelin 1a [Source:ZFIN;Acc:ZDB-GENE-061103-184]
64. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 0.916 - - - 0.916 - - - - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
65. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.914 - - - 0.914 - - - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
66. C10H21orf59 275 0.912 - - - 0.912 - - - - - c10h21orf59 homolog (H. sapiens)
67. tax1bp1a ENSDARG00000098288 587 0.911 - - - 0.911 - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-587]
68. abhd3 ENSDARG00000018809 168 0.911 - - - 0.911 - - - - - abhydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-90]
69. adam8a ENSDARG00000001452 316 0.911 - - - 0.911 - - - - - ADAM metallopeptidase domain 8a [Source:ZFIN;Acc:ZDB-GENE-030616-622]
70. ANKRD13D ENSDARG00000098140 88 0.91 - - - 0.910 - - - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
71. eif2ak1 ENSDARG00000093182, ENSDARG00000112267 695 0.908 - - - 0.908 - - - - - eukaryotic translation initiation factor 2-alpha kinase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-268]
72. si:ch1073-155h21.1 ENSDARG00000007582 137 0.908 - - - 0.908 - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
73. KBTBD13_1 KBTBD13_1 116 0.907 - - - 0.907 - - - - -
74. hsd17b14 ENSDARG00000054842 1394 0.907 - - - 0.907 - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
75. MRAS ENSDARG00000075285 260 0.906 - - - 0.906 - - - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
76. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 0.906 - - - 0.906 - - - - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
77. flt4 ENSDARG00000104453 557 0.905 - - - 0.905 - - - - - fms-related tyrosine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-980526-326]
78. akap9 ENSDARG00000079610 654 0.904 - - - 0.904 - - - - - A kinase (PRKA) anchor protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-7276]
79. C2CD2 ENSDARG00000105000 2573 0.903 - - - 0.903 - - - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
80. SLC46A3 ENSDARG00000077313 162 0.903 - - - 0.903 - - - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
81. glg1b ENSDARG00000101210 177 0.9 - - - 0.900 - - - - - golgi glycoprotein 1b [Source:ZFIN;Acc:ZDB-GENE-060825-255]
82. CABZ01020188.1 CABZ01020188.1 61 0.899 - - - 0.899 - - - - -
83. MTERFD2 MTERFD2 140 0.899 - - - 0.899 - - - - -
84. sacs ENSDARG00000091042 314 0.898 - - - 0.898 - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
85. ndufaf6 ENSDARG00000053652 351 0.897 - - - 0.897 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:ZFIN;Acc:ZDB-GENE-100112-1]
86. itgb1b.2 ENSDARG00000022689 523 0.897 - - - 0.897 - - - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
87. si:dkey-17e16.8 284 0.896 - - - 0.896 - - - - - si:dkey-17e16.8
88. FRMD4B FRMD4B 359 0.896 - - - 0.896 - - - - -
89. C3H19orf52 C3H19orf52 541 0.894 - - - 0.894 - - - - -
90. pla2g7 ENSDARG00000003584 365 0.892 - - - 0.892 - - - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:ZFIN;Acc:ZDB-GENE-040426-2248]
91. map2k1 ENSDARG00000007825 373 0.891 - - - 0.891 - - - - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
92. mtx1a ENSDARG00000025500 275 0.89 - - - 0.890 - - - - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
93. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 0.889 - 0.889 - - - - - - - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
94. MFAP4_2 MFAP4_2 592 0.889 - - - 0.889 - - - - -
95. dclk2 dclk2 719 0.888 - - - 0.888 - - - - -
96. pif1 ENSDARG00000020289 216 0.888 - - - 0.888 - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
97. C25H11orf74 C25H11orf74 161 0.888 - - - 0.888 - - - - -
98. ints12 ENSDARG00000091678 3261 0.886 - - - 0.886 - - - - - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
99. rnf34a ENSDARG00000038300 179 0.886 - - - 0.886 - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
100. xrn2 ENSDARG00000101900 2875 0.886 - 0.886 - - - - - - - 5'-3' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2874]

There are 785 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA