Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdk5r1b

Gene Name Gene ID Reads Annotation
cdk5r1b ENSDARG00000045087 2075 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]










Genes with expression patterns similar to cdk5r1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk5r1b ENSDARG00000045087 2075 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
2. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 3.722 0.856 0.975 - - - 0.908 0.983 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
3. INA INA 950 3.608 0.839 0.814 - - - 0.983 0.972 - -
4. BX957337.1 BX957337.1 1685 3.554 0.718 - - - - 0.861 0.977 - 0.998
5. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 3.554 0.887 0.848 - - - 0.879 0.940 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
6. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.516 0.905 - - - - 0.874 0.922 0.815 -
7. TUBB8P7_1 TUBB8P7_1 2722 3.49 0.904 0.728 - - - 0.930 0.928 - -
8. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 3.478 0.905 0.706 - - - 0.874 0.993 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
9. sh3gl2 sh3gl2 1305 3.474 0.861 0.749 - - - 0.913 0.951 - -
10. fgf13b ENSDARG00000056633 455 3.464 0.742 0.910 - - - 0.966 0.846 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
11. adam11 ENSDARG00000079204 298 3.461 0.902 0.870 - - - 0.844 0.845 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
12. rab3ab ENSDARG00000043835 1267 3.436 0.819 0.746 - - - 0.919 0.952 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
13. adcyap1b ENSDARG00000027740 1539 3.419 0.963 0.852 - - - 0.878 0.726 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
14. cspg5a ENSDARG00000069981 1699 3.398 0.712 0.851 - - - 0.912 0.923 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
15. ppp3ca ENSDARG00000004988 615 3.393 0.829 0.903 - - - 0.764 0.897 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
16. mllt11 ENSDARG00000071026 2518 3.382 0.845 0.751 - - - 0.930 0.856 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
17. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 3.371 0.806 - - - - 0.901 0.875 0.789 - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
18. atp6v0cb ENSDARG00000036577 3472 3.331 0.700 - - - - 0.938 0.920 0.773 - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
19. zic2b ENSDARG00000037178, ENSDARG00000112354 993 3.315 0.912 0.875 - - - 0.761 0.767 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
20. C7H4orf48 C7H4orf48 1455 3.312 0.833 0.828 - - - 0.854 0.797 - -
21. gabra5 ENSDARG00000070730 156 3.297 0.853 0.767 - - - 0.761 0.916 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
22. syt11a ENSDARG00000057913 1145 3.295 0.801 - - - - 0.832 0.864 0.798 - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
23. eno2 ENSDARG00000014287 2162 3.233 0.863 0.725 - - - 0.799 0.846 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
24. rheb ENSDARG00000090213 1432 3.207 0.719 0.819 - - - 0.931 0.738 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
25. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 3.096 0.774 - - - 0.716 0.723 0.883 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
26. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.975 0.726 - - - - 0.746 0.768 - 0.735 adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
27. cadm3 ENSDARG00000057013 1545 2.849 0.941 - - - - 0.941 0.967 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
28. elavl4 ENSDARG00000045639 998 2.84 0.943 - - - - 0.919 0.978 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
29. stx1b ENSDARG00000000503 2724 2.829 0.880 - - - - 0.975 0.974 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
30. dpysl3 ENSDARG00000002587 4381 2.82 0.895 - - - - 0.976 0.949 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
31. slc1a2b ENSDARG00000102453 3136 2.81 0.964 - - - - 0.926 0.920 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
32. snap25a ENSDARG00000020609 4537 2.805 0.926 - - - - 0.927 0.952 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
33. tmeff1b ENSDARG00000056740 11253 2.802 - - - - - 0.963 0.878 - 0.961 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
34. scn8aa ENSDARG00000005775 792 2.794 0.916 - - - - 0.965 0.913 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
35. SV2B SV2B 208 2.775 0.954 - - - - 0.836 0.985 - -
36. STMN3 ENSDARG00000038465 1009 2.771 0.874 - - - - 0.937 0.960 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
37. MAP1A MAP1A 847 2.765 0.905 - - - - 0.903 0.957 - -
38. gap43 ENSDARG00000099744 4114 2.744 0.921 - - - - 0.922 0.901 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
39. vsnl1a ENSDARG00000023228 1584 2.743 - - - - - 0.844 0.900 - 0.999 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
40. GADD45G GADD45G 382 2.741 0.972 - - - - 0.861 0.908 - -
41. stmn2a ENSDARG00000033234 2272 2.731 0.962 - - - - 0.818 0.951 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
42. gsx1 ENSDARG00000035735 1243 2.728 0.843 - - - - 0.959 0.926 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
43. rbfox3 rbfox3 1443 2.723 0.839 - - - - 0.940 0.944 - -
44. lhx5 ENSDARG00000057936 785 2.722 0.951 - - - - 0.803 0.968 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
45. tuba1c ENSDARG00000055216 8384 2.722 0.801 - - - - 0.958 0.963 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
46. APBB3 ENSDARG00000053771 654 2.721 0.917 - - - - 0.853 0.951 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
47. pou4f1 ENSDARG00000005559 821 2.71 0.927 - - - - 0.831 0.952 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
48. aplp1 ENSDARG00000098368 2317 2.71 0.939 0.926 - - - 0.845 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
49. ndrg4 ENSDARG00000103937 1234 2.708 0.841 - - - - 0.899 0.968 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
50. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.708 0.804 - - - - 0.940 0.964 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
51. amph ENSDARG00000007663 599 2.699 0.889 - - - - 0.858 0.952 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
52. vamp1 ENSDARG00000031283 3094 2.695 0.807 0.900 - - - 0.988 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
53. nefmb ENSDARG00000043697 2052 2.693 0.860 - - - - 0.962 0.871 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
54. TUSC5 TUSC5 1436 2.692 0.960 - - - - 0.780 0.952 - -
55. gabrg2 ENSDARG00000053665 434 2.684 0.852 - - - - 0.864 0.968 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
56. nbeaa ENSDARG00000070080 862 2.681 - 0.854 - - - 0.884 0.943 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
57. dnajc5aa ENSDARG00000042948 2885 2.678 0.798 - - - - 0.979 0.901 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
58. msi1 ENSDARG00000010710 2634 2.676 - 0.771 - - - 0.961 0.944 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
59. Sep-03 Sep-03 1124 2.663 - 0.925 - - - 0.908 0.830 - -
60. sypb ENSDARG00000002230 262 2.66 0.829 - - - - 0.875 0.956 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
61. syt4 ENSDARG00000036505 421 2.659 0.937 - - - - 0.781 0.941 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
62. rusc1 ENSDARG00000078125 617 2.658 0.918 - - - - 0.933 0.807 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
63. ATP6AP1L ATP6AP1L 164 2.657 0.919 - - - - 0.855 0.883 - -
64. scn2b ENSDARG00000101713 796 2.656 0.867 - - - - 0.854 0.935 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
65. SV2A ENSDARG00000059945 1278 2.655 0.904 0.915 - - - - 0.836 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
66. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.65 0.797 - - - - 0.906 0.947 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
67. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.649 0.763 - - - - 0.929 0.957 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
68. gng3 ENSDARG00000009553 2530 2.649 0.807 - - - - 0.879 0.963 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
69. lhx1a ENSDARG00000014018 958 2.647 0.760 - - - - 0.906 0.981 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
70. prrt1 ENSDARG00000062208 368 2.642 0.890 - - - - 0.860 0.892 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
71. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.638 - 0.810 - - - 0.873 0.955 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
72. scrt2 ENSDARG00000056175 4331 2.637 0.779 - - - - 0.916 0.942 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
73. ZFHX3 ENSDARG00000103057 7759 2.636 0.829 - - - - 0.926 0.881 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
74. dbx2 2971 2.632 0.749 - - - - 0.915 0.968 - - developing brain homeobox 2
75. SPOCK1 ENSDARG00000074644 794 2.631 0.740 - - - - 0.965 0.926 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
76. CABZ01111990.1 CABZ01111990.1 4374 2.626 0.780 - - - - 0.909 0.937 - -
77. sncgb ENSDARG00000109715 1014 2.622 0.746 - - - - 0.897 0.979 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
78. slc32a1 ENSDARG00000059775 1092 2.621 0.789 - - - - 0.879 0.953 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
79. epha4b ENSDARG00000011600 3110 2.62 0.755 - - - - 0.944 0.921 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
80. nadl1.1 1200 2.62 0.758 - - - - 0.946 0.916 - - neural adhesion molecule L1.1, transcript variant X1
81. BX511121.1 ENSDARG00000029997 1774 2.619 - 0.953 - - - 0.896 0.770 - -
82. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.618 0.798 - - - - 0.876 0.944 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
83. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.607 - 0.895 - - - 0.837 0.875 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
84. cers6 ENSDARG00000053583 247 2.607 0.884 - - - - 0.810 0.913 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
85. nrn1a ENSDARG00000071860 1311 2.607 0.942 - - - - 0.847 0.818 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
86. cplx2l ENSDARG00000018997 3975 2.606 0.809 0.835 - - - - 0.962 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
87. sept5a ENSDARG00000013843 1206 2.605 0.906 - - - - 0.891 0.808 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
88. C21H5orf24 C21H5orf24 333 2.605 0.859 - - - - 0.801 0.945 - -
89. evx2 ENSDARG00000059255 317 2.594 0.809 - - - - 0.846 0.939 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
90. celf4 ENSDARG00000070045 1537 2.593 0.865 - - - - 0.814 0.914 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
91. AGO1 ENSDARG00000092644 4521 2.592 0.770 - - - - 0.961 0.861 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
92. bhlhe22 ENSDARG00000058039 1673 2.59 0.779 - - - - 0.840 0.971 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
93. tmem35 ENSDARG00000052567 5685 2.589 0.808 - - - - 0.936 0.845 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
94. SKOR2 SKOR2 1041 2.589 0.855 - - - - 0.775 0.959 - -
95. tmem59l ENSDARG00000003655 1536 2.587 0.872 - - - - 0.875 0.840 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
96. stmn4l ENSDARG00000043932 654 2.586 0.767 - - - - 0.863 0.956 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
97. PPFIA3 ENSDARG00000077053 310 2.583 0.885 - - - - - 0.892 0.806 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
98. stmn2b ENSDARG00000070537 1586 2.583 0.823 - - - - 0.938 0.822 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
99. KIF1A KIF1A 1686 2.582 0.784 0.908 - - - - 0.890 - -
100. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.579 - - - 0.705 - 0.938 0.936 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]

There are 2357 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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