Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdk5r1a

Gene Name Gene ID Reads Annotation
cdk5r1a ENSDARG00000037916 46 cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]










Genes with expression patterns similar to cdk5r1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk5r1a ENSDARG00000037916 46 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
2. CAMK1 CAMK1 28 3.547 1.000 - - - 0.783 - 1.000 0.764 -
3. UBASH3B_1 UBASH3B_1 28 2.795 1.000 0.961 - 0.834 - - - - -
4. plscr3a ENSDARG00000093078 7 2.709 - 1.000 - - - - 1.000 0.709 - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
5. mapk15 ENSDARG00000100822 157 2.53 0.815 0.887 0.828 - - - - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
6. lhfpl4a ENSDARG00000111810 206 2.487 - 0.875 - - - - 0.897 0.715 - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
7. lrrc18b ENSDARG00000076236 5 2 1.000 1.000 - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
8. TENM3 ENSDARG00000005479 39 2 1.000 - - - - - 1.000 - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
9. rassf4 ENSDARG00000012460 43 2 - 1.000 - - - - 1.000 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
10. SMARCA4 ENSDARG00000104339 48 2 - 1.000 - - - - 1.000 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
11. si:ch73-7i4.1 ENSDARG00000094554 771 2 1.000 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
12. si:dkey-193c22.1 ENSDARG00000093687 104 2 - 1.000 - - - - 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
13. si:ch211-237l4.6 ENSDARG00000056915 49 2 1.000 1.000 - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
14. pcdh1g18 ENSDARG00000099447 7 2 1.000 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
15. cldnd ENSDARG00000006580 17 2 - 1.000 - - - - 1.000 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
16. kirrel3a ENSDARG00000075806 36 1.957 0.957 - - - - - 1.000 - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
17. adam10b ENSDARG00000015502 26 1.954 - 1.000 - - 0.954 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
18. erap2 ENSDARG00000098618 16 1.929 - 1.000 - - - - 0.929 - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
19. pdzd4 175 1.914 - 1.000 - - - - 0.914 - - PDZ domain containing 4, transcript variant X2
20. fez1 ENSDARG00000023174 701 1.889 - 1.000 - - - - 0.889 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
21. LMTK3 LMTK3 222 1.884 - 1.000 - - - - 0.884 - -
22. cacng2a ENSDARG00000032565 99 1.882 - 1.000 - - - - 0.882 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
23. pigf ENSDARG00000032780 7 1.88 - 0.880 - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
24. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.873 - 1.000 - - - - 0.873 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
25. si:dkey-14o6.7 si:dkey-14o6.7 9 1.854 0.854 1.000 - - - - - - -
26. si:dkey-81p22.11 ENSDARG00000093797 68 1.854 0.854 1.000 - - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
27. NFATC4 ENSDARG00000054162 44 1.851 - 1.000 - - - 0.851 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
28. ankrd29 ENSDARG00000057159, ENSDARG00000112325 64 1.848 0.848 - - - - - 1.000 - - ankyrin repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-050208-655]
29. zgc:153615 ENSDARG00000038981 105 1.846 - 1.000 - - - - 0.846 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
30. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.843 - 1.000 - - - - 0.843 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
31. pcbp3 ENSDARG00000054378 74 1.842 - 1.000 - - - - 0.842 - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
32. arhgef9a ENSDARG00000061746 58 1.828 - 1.000 - - - - 0.828 - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
33. BX470131.1 BX470131.1 86 1.828 - 1.000 - - - - 0.828 - -
34. blm ENSDARG00000077089 245 1.82 0.938 - - - - 0.882 - - - Bloom syndrome, RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-070702-5]
35. TMEM57 TMEM57 260 1.82 - 1.000 - - - - 0.820 - -
36. si:ch211-121j5.2 si:ch211-121j5.2 86 1.807 - 0.865 0.942 - - - - - -
37. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.804 - 1.000 0.804 - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
38. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.799 1.000 - - - - 0.799 - - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
39. lhx5 ENSDARG00000057936 785 1.798 - 1.000 - - - - 0.798 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
40. mettl25 ENSDARG00000045754 36 1.796 - 1.000 - - - - - 0.796 - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
41. nt5c1ba ENSDARG00000018153 31 1.788 1.000 - - - - - 0.788 - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
42. RHOBTB1 ENSDARG00000079468 189 1.784 - - - - - - 1.000 0.784 - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
43. sf3b3 ENSDARG00000103553 57 1.776 - - - - - 0.776 1.000 - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
44. DOCK4 DOCK4 78 1.776 - 1.000 - - - - 0.776 - -
45. si:dkey-14d8.9 si:dkey-14d8.9 66 1.771 1.000 0.771 - - - - - - -
46. si:dkey-122c11.4 si:dkey-122c11.4 13 1.769 - - - - - - 1.000 0.769 -
47. lingo2 lingo2 67 1.765 1.000 - - - 0.765 - - - -
48. HYKK_1 HYKK_1 4 1.765 - 1.000 - - - - - 0.765 -
49. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1.758 - 1.000 - 0.758 - - - - -
50. CR932358.2 CR932358.2 15 1.747 1.000 - - - 0.747 - - - -
51. dock11 ENSDARG00000062485 17 1.746 1.000 - - - - 0.746 - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
52. si:dkeyp-33e11.1 6 1.746 - 1.000 - - - 0.746 - - - si:dkeyp-33e11.1, transcript variant X3
53. CABZ01086354.1 CABZ01086354.1 22 1.746 - - - - - 0.746 1.000 - -
54. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1.746 - 1.000 - - - 0.746 - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
55. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1.746 - 1.000 - - - 0.746 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
56. mcm5_1 ENSDARG00000019507 10 1.746 - 1.000 - - - 0.746 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
57. si:dkey-115f9.3 7 1.746 - - - - - 0.746 1.000 - - si:dkey-115f9.3, transcript variant X2
58. dmrt1 ENSDARG00000007349 16 1.746 - 1.000 - - - 0.746 - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
59. mei4 ENSDARG00000043912 10 1.746 - - - - - 0.746 1.000 - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
60. BX530409.1 BX530409.1 65 1.741 - - - - - - 1.000 0.741 -
61. HRASLS ENSDARG00000100021 16 1.733 0.874 - - - - - 0.859 - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
62. bhlhe22 ENSDARG00000058039 1673 1.731 - 0.954 - - - - 0.777 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
63. ROBO3_1 ROBO3_1 468 1.727 - 0.893 - - - - 0.834 - -
64. b3galnt2 ENSDARG00000046133 68 1.727 0.880 0.847 - - - - - - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
65. mb21d2a mb21d2a 421 1.726 - 0.835 - - - - 0.891 - -
66. AL935174.1 ENSDARG00000109674 18 1.715 1.000 - - - - - - 0.715 -
67. wbscr27 wbscr27 70 1.711 - - 0.890 0.821 - - - - -
68. C3H17orf104 C3H17orf104 16 1.71 - - 0.964 - - 0.746 - - -
69. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1.709 - 1.000 - - - - - 0.709 - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
70. eef1a1a ENSDARG00000039502 234 1.707 0.802 - - - - - 0.905 - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
71. EXD1 ENSDARG00000098669 27 1.687 - 0.941 - - - 0.746 - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
72. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.679 - 0.880 0.799 - - - - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
73. zgc:113295_1 ENSDARG00000074768, ENSDARG00000103947 21 1.679 0.771 - - 0.908 - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
74. CABZ01061873.1 CABZ01061873.1 51 1.671 - 0.880 - - - - 0.791 - -
75. cacng8b ENSDARG00000070626 176 1.67 - 0.794 - - - - 0.876 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
76. LINGO2 LINGO2 300 1.665 - 0.880 - - - - 0.785 - -
77. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 1.659 - - - - - 0.857 0.802 - - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
78. ube2b ENSDARG00000026035 51 1.651 0.823 - - - - 0.828 - - - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
79. golga2 ENSDARG00000063197 30 1.645 - 0.794 - - - 0.851 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
80. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1.64 - - - 0.894 - 0.746 - - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
81. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.633 - - 0.932 - - - 0.701 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
82. U1_33 U1_33 76 1.632 0.719 - 0.913 - - - - - -
83. zte25 zte25 29 1.631 - - - 0.780 - 0.851 - - -
84. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 1.628 - - - - - 0.866 0.762 - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
85. stk35_1 ENSDARG00000086856 3 1.6 0.854 - - - - 0.746 - - - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
86. eef1a1b ENSDARG00000069951 35 1.597 - - - - - 0.799 0.798 - - eukaryotic translation elongation factor 1 alpha 1b [Source:ZFIN;Acc:ZDB-GENE-050417-327]
87. BX649458.1 BX649458.1 166 1.596 - 0.783 - - - - 0.813 - -
88. elavl4 ENSDARG00000045639 998 1.58 - 0.794 - - - - 0.786 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
89. ntrk2a ENSDARG00000059897 185 1.554 - - 0.726 - - - 0.828 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
90. si:ch211-137i24.12 ENSDARG00000094537 35 1.552 - 0.710 - - - - 0.842 - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
91. foxh1 ENSDARG00000055630 10 1.547 - - - 0.835 0.712 - - - - forkhead box H1 [Source:ZFIN;Acc:ZDB-GENE-000616-15]
92. HABP4 HABP4 33 1.543 - - - 0.797 - 0.746 - - -
93. gabrg2 ENSDARG00000053665 434 1.54 - - - - - - 0.836 0.704 - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
94. polh ENSDARG00000070231, ENSDARG00000111719 154 1.538 - - 0.731 - - 0.807 - - - polymerase (DNA directed), eta [Source:ZFIN;Acc:ZDB-GENE-060421-4949]
95. U11 U11 11 1.538 - - - - 0.773 - - 0.765 -
96. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1.534 - - 0.788 - - 0.746 - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
97. chmp5a ENSDARG00000038855 129 1.529 - - - 0.827 - - 0.702 - - charged multivesicular body protein 5a [Source:ZFIN;Acc:ZDB-GENE-060503-60]
98. gphnb ENSDARG00000100851 118 1.522 - - - 0.814 - - 0.708 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
99. znf512 ENSDARG00000041910 20 1.516 - 0.770 - - - 0.746 - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
100. KCNAB3 KCNAB3 134 1.51 - - - 0.744 - - 0.766 - -

There are 1673 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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