Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdk5

Gene Name Gene ID Reads Annotation
cdk5 ENSDARG00000056683 1998 cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]










Genes with expression patterns similar to cdk5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk5 ENSDARG00000056683 1998 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
2. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.488 - - - - 0.958 - 0.807 - 0.723 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
3. ck2a1 ck2a1 3749 2.429 - 0.731 - - 0.978 0.720 - - -
4. sf3a1 ENSDARG00000041887 6702 2.304 - - - - - 0.839 0.759 - 0.706 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
5. col11a1b ENSDARG00000009014 9998 1.771 - 0.776 - - 0.995 - - - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
6. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.761 - - - - 0.980 - 0.781 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
7. znf207a ENSDARG00000015538 2630 1.753 - - - - 0.963 0.790 - - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
8. gpm6ab ENSDARG00000004621 5825 1.725 - - - - 0.974 - - - 0.751 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
9. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.715 - 0.738 - - 0.977 - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
10. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 1.715 - - - - 0.994 - - - 0.721 syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
11. ckap5 ENSDARG00000102674 5068 1.705 - - - - 0.963 0.742 - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
12. rnaseh1 ENSDARG00000042571 922 1.702 - - - - 0.996 - 0.706 - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
13. kdm6bb ENSDARG00000056929 4807 1.701 - - - - 0.992 - - - 0.709 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
14. nmt1a ENSDARG00000052966 5918 1.7 - 0.707 - - 0.993 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
15. ipo4 ENSDARG00000041493 1578 1.697 - 0.703 - - 0.994 - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
16. sf1 ENSDARG00000008188 5142 1.69 - - - - 0.954 - 0.736 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
17. spry4 ENSDARG00000068732 2091 1.689 - - - 0.702 0.987 - - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
18. jarid2b ENSDARG00000062268 2206 1.673 - - - - 0.951 - - - 0.722 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
19. tnrc6b ENSDARG00000074161 4597 1.673 - - - - 0.886 - 0.787 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
20. dld ENSDARG00000020219 4928 1.661 - - - - 0.955 - - - 0.706 deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
21. chd4b ENSDARG00000025789 14299 1.638 - 0.719 - - 0.919 - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
22. rspry1 ENSDARG00000062558 1424 1.598 - 0.827 - - - - 0.771 - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
23. znf292b ENSDARG00000043973 3791 1.578 - - - - 0.830 0.748 - - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
24. snrpb2 ENSDARG00000039424 1597 1.546 - 0.798 - - - - - 0.748 - small nuclear ribonucleoprotein polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-060616-2]
25. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 1.529 - 0.765 - - - 0.764 - - - polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
26. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.511 - - - - - - 0.792 - 0.719 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
27. grb2a ENSDARG00000105276, ENSDARG00000111933, ENSDARG00000115948 1477 1.506 - 0.757 - - - - 0.749 - - growth factor receptor-bound protein 2a [Source:ZFIN;Acc:ZDB-GENE-041121-1]
28. dyrk2 ENSDARG00000094646 2163 1.496 0.718 0.778 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
29. usp7 ENSDARG00000073710 7017 1.494 - - - - - - 0.785 - 0.709 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
30. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 1.486 - 0.749 - - - - - - 0.737 ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
31. faf2 ENSDARG00000052374 1351 1.483 - - - - - 0.757 0.726 - - Fas associated factor family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-312]
32. polr2d ENSDARG00000076509 3386 1.473 - - - - - 0.745 0.728 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
33. srrt ENSDARG00000017762, ENSDARG00000114824 2158 1.468 - - - - - - 0.709 - 0.759 serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
34. ezh2 ENSDARG00000010571 3273 1.466 - - - - - 0.763 - - 0.703 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
35. sarnp ENSDARG00000059357 4768 1.465 - - - - - 0.745 0.720 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
36. btaf1 ENSDARG00000060089 822 1.461 - 0.733 - - - 0.728 - - - BTAF1 RNA polymerase II, B-TFIID transcription factor-associated [Source:ZFIN;Acc:ZDB-GENE-021025-1]
37. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.46 - - - - - - 0.747 - 0.713 frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
38. ppp1r10 ENSDARG00000032651 1465 1.459 - - - - - - 0.756 - 0.703 protein phosphatase 1, regulatory subunit 10 [Source:ZFIN;Acc:ZDB-GENE-020419-15]
39. smarca5 ENSDARG00000052348 15433 1.428 - - - - - - 0.709 - 0.719 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
40. tmem50a ENSDARG00000015757 3244 1.428 0.721 - - - - - 0.707 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
41. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.424 - - - - - 0.704 - - 0.720 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
42. u2af1 ENSDARG00000015325 3217 1.405 - - - - - - 0.701 - 0.704 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
43. kdm2aa ENSDARG00000059653 2389 1.405 - 0.702 - - - - - - 0.703 lysine (K)-specific demethylase 2Aa [Source:ZFIN;Acc:ZDB-GENE-061215-144]
44. il12rb2l ENSDARG00000074850 407 0.998 - - - - 0.998 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
45. cdkn1a ENSDARG00000076554 591 0.998 - - - - 0.998 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
46. sh3bp5a ENSDARG00000100529 642 0.998 - - - - 0.998 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
47. CABZ01027552.1 CABZ01027552.1 760 0.998 - - - - 0.998 - - - -
48. tarsl2 ENSDARG00000092774 505 0.998 - - - - 0.998 - - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
49. cog4 ENSDARG00000054264 785 0.997 - - - - 0.997 - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
50. ccdc53 982 0.997 - - - - 0.997 - - - - coiled-coil domain containing 53
51. zgc:110699 ENSDARG00000017474 381 0.997 - - - - 0.997 - - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
52. ttc13 ENSDARG00000063242 1360 0.997 - - - - 0.997 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
53. armc9 ENSDARG00000087299 459 0.997 - - - - 0.997 - - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
54. WIPF3 WIPF3 804 0.997 - - - - 0.997 - - - -
55. USP2_1 USP2_1 544 0.997 - - - - 0.997 - - - -
56. SNORA70 SNORA70 511 0.997 - - - - 0.997 - - - -
57. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.997 - - - - 0.997 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
58. wu:fc26g07 wu:fc26g07 1165 0.996 - - - - 0.996 - - - -
59. adcyap1b ENSDARG00000027740 1539 0.996 - - - - 0.996 - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
60. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 0.996 - - - - 0.996 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
61. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.996 - - - - 0.996 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
62. ticrr ENSDARG00000045605 739 0.996 - - - - 0.996 - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
63. atp1b4 ENSDARG00000053262 1337 0.996 - - - - 0.996 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
64. otx2 766 0.996 - - - - 0.996 - - - - orthodenticle homeobox 2, transcript variant X2
65. prickle3 ENSDARG00000073996 840 0.996 - - - - 0.996 - - - - prickle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-081105-86]
66. znf280d ENSDARG00000077013 1387 0.995 - - - - 0.995 - - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
67. si:dkey-251i10.2 ENSDARG00000093957 4424 0.995 - - - - 0.995 - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
68. upb1 ENSDARG00000011521, ENSDARG00000116790 920 0.995 - - - - 0.995 - - - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
69. usp40 ENSDARG00000071197 825 0.995 - - - - 0.995 - - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
70. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 0.995 - - - - 0.995 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
71. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 0.994 - - - - 0.994 - - - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
72. ESCO1 ENSDARG00000077057 1112 0.994 - - - - 0.994 - - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-130530-818]
73. pik3r3a ENSDARG00000103038 1132 0.994 - - - - 0.994 - - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
74. prrc1 ENSDARG00000044304 1567 0.994 - - - - 0.994 - - - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
75. esf1 ENSDARG00000008740 1206 0.994 - - - - 0.994 - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
76. eif3d ENSDARG00000021257 1524 0.994 - - - - 0.994 - - - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
77. slc20a1b ENSDARG00000010641 2564 0.994 - - - - 0.994 - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
78. clasp1a ENSDARG00000010280 1158 0.994 - - - - 0.994 - - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
79. rbpja ENSDARG00000003398 1309 0.994 - - - - 0.994 - - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
80. gab1 ENSDARG00000037018 1489 0.994 - - - - 0.994 - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
81. AP3B1 2363 0.994 - - - - 0.994 - - - - adaptor related protein complex 3 beta 1 subunit
82. arhgap11a ENSDARG00000100019 1642 0.994 - - - - 0.994 - - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
83. nsl1 ENSDARG00000024471 1269 0.993 - - - - 0.993 - - - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
84. pik3cb ENSDARG00000075253 2075 0.993 - - - - 0.993 - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
85. cuedc1b ENSDARG00000054748 1638 0.993 - - - - 0.993 - - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
86. ARHGEF5 2727 0.993 - - - - 0.993 - - - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
87. itm2ca ENSDARG00000043448 1265 0.993 - - - - 0.993 - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
88. thoc7 ENSDARG00000015394 3824 0.993 - - - - 0.993 - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
89. lama4 ENSDARG00000020785 1522 0.993 - - - - 0.993 - - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
90. mtor ENSDARG00000053196 2156 0.993 - - - - 0.993 - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
91. USP24 ENSDARG00000059925 1294 0.993 - - - - 0.993 - - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
92. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 0.992 - - - - 0.992 - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
93. si:ch211-197h24.6 ENSDARG00000091631 1933 0.992 - - - - 0.992 - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
94. sh3bgrl3 ENSDARG00000098075 3071 0.992 - - - - 0.992 - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
95. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 0.992 - - - - 0.992 - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
96. mrpl11 ENSDARG00000013075 2927 0.992 - - - - 0.992 - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
97. sf3b3_1 ENSDARG00000103553 1191 0.991 - - - - 0.991 - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
98. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 0.991 - - - - 0.991 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
99. sap130b ENSDARG00000079352 1468 0.991 - - - - 0.991 - - - - Sin3A-associated protein b [Source:ZFIN;Acc:ZDB-GENE-070912-570]
100. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 0.991 - - - - 0.991 - - - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]

There are 877 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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