Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdk13

Gene Name Gene ID Reads Annotation
cdk13 ENSDARG00000076791 828 cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]










Genes with expression patterns similar to cdk13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk13 ENSDARG00000076791 828 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
2. si:ch211-113e8.10 ENSDARG00000079631 498 1.894 - 0.947 - - - - - - 0.947 si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
3. aftpha ENSDARG00000069249 867 1.865 - - - - - - 0.906 - 0.959 aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
4. sptlc2b ENSDARG00000074287 1853 1.844 - - - - - 0.999 - - 0.845 serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
5. ATP6AP1L_1 ATP6AP1L_1 508 1.83 - - - - - - 0.885 - 0.945
6. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 1.827 - 0.830 - - - 0.997 - - - stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
7. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.765 - 0.861 - - - - - - 0.904 serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
8. tspan5b ENSDARG00000070449 1056 1.743 - 0.791 - - - - - - 0.952 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
9. ccnd2a ENSDARG00000051748 2506 1.735 - 0.738 - - - 0.997 - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
10. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 1.732 - - - - - 0.999 0.733 - - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
11. sh3pxd2aa ENSDARG00000060148 913 1.724 - 0.802 - - - - - - 0.922 SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
12. csgalnact2 ENSDARG00000061400 741 1.724 - 0.796 - - - - - - 0.928 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5186]
13. st8sia2 ENSDARG00000018788 2183 1.721 - - - 0.793 - - - - 0.928 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
14. ube2d2l ENSDARG00000099749 1462 1.719 - 0.833 - - - - - - 0.886 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
15. dvl1b ENSDARG00000055552 146 1.698 0.739 - - - - - - - 0.959 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
16. KDM6B KDM6B 10265 1.691 - - - - - 0.910 - - 0.781
17. srek1ip1 ENSDARG00000043728 985 1.68 - - - 0.753 - - - - 0.927 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
18. lysmd3 ENSDARG00000024693 754 1.671 0.741 - - - - - - - 0.930 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
19. CENPF ENSDARG00000055133 436 1.67 - - - - - - - 0.719 0.951 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
20. eml3 ENSDARG00000058038 449 1.665 0.740 - - - - - - - 0.925 echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
21. RFFL_1 RFFL_1 157 1.662 0.708 - - - - - - - 0.954
22. CCDC88C ENSDARG00000053713 1026 1.66 - - - 0.712 - - - - 0.948 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
23. spred2a ENSDARG00000052435 1624 1.655 - 0.724 - - - - - - 0.931 sprouty-related, EVH1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-110830-2]
24. efna5a ENSDARG00000089790 1007 1.654 - 0.741 - - - - - - 0.913 ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
25. RANBP3 RANBP3 2513 1.642 - - - - - - 0.884 - 0.758
26. pspc1 ENSDARG00000006621 966 1.64 - 0.745 - - - - - - 0.895 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
27. kif15 ENSDARG00000012073 1936 1.635 - - - 0.767 - - - - 0.868 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
28. angptl4 ENSDARG00000035859 2701 1.627 - - - - - 0.805 - - 0.822 angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
29. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.622 - 0.733 - - - 0.889 - - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
30. gdi1 ENSDARG00000056122 4106 1.609 - - - - - - 0.702 - 0.907 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
31. CU571336.1 ENSDARG00000099892 2164 1.604 - - - - - 0.715 - - 0.889
32. 5S_rRNA_21 5S_rRNA_21 1323 1.597 - - - 0.707 - - - - 0.890
33. ube2j2 ENSDARG00000061161 844 1.59 - 0.711 - - - - - - 0.879 ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
34. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.587 - - - 0.705 - - - - 0.882 protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
35. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 1.584 - - - - - - 0.761 - 0.823 erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
36. morc2 ENSDARG00000028539 3259 1.58 - - - - - - 0.751 - 0.829 MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
37. si:ch211-215d8.2 ENSDARG00000093233 784 1.574 - 0.837 - - - - 0.737 - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
38. PHB2 PHB2 3755 1.561 - - - - - 0.715 - - 0.846
39. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 1.555 0.778 0.777 - - - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
40. C13H10orf32 C13H10orf32 465 1.553 - 0.753 - - - - 0.800 - -
41. ptbp2a ENSDARG00000101947 1921 1.542 0.725 0.817 - - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
42. aup1 ENSDARG00000092609 2431 1.533 - 0.771 - - - - 0.762 - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
43. leo1 ENSDARG00000055357 1644 1.52 - - - 0.747 - - 0.773 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
44. TCEB3 2429 1.516 - - - - - - 0.724 - 0.792 transcription elongation factor B (SIII), polypeptide 3
45. cmasb 499 1.515 - 0.784 - - - - 0.731 - - cytidine monophosphate N-acetylneuraminic acid synthetase b
46. npas3b npas3b 1446 1.511 - - - 0.774 - - - - 0.737
47. yaf2 ENSDARG00000015966 1905 1.493 - 0.766 - - - - 0.727 - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
48. hgs ENSDARG00000020960 3574 1.49 - - - - - - - 0.751 0.739 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
49. PRIM2 ENSDARG00000052721 825 1.487 - 0.784 - - - - 0.703 - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
50. sf1 ENSDARG00000008188 5142 1.485 - - - 0.769 - - 0.716 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
51. LEPROTL1 ENSDARG00000104871 3019 1.482 - - - - - - 0.747 - 0.735 leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
52. arid2 ENSDARG00000007413 4413 1.479 0.769 - - 0.710 - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
53. MATR3 MATR3 3962 1.477 - 0.729 - - - - - - 0.748
54. nckap1 ENSDARG00000060853 3540 1.459 - - - - - - 0.731 - 0.728 NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
55. uhrf1 ENSDARG00000103409 3282 1.434 - - - 0.722 - - - - 0.712 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
56. ripk1l ENSDARG00000006677 593 1.432 0.720 0.712 - - - - - - - receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
57. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.421 - - 0.710 0.711 - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
58. cbsa ENSDARG00000053500, ENSDARG00000112676 792 1 - - - - - 1.000 - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
59. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - - - - 1.000 - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
60. si:dkeyp-73a2.2 ENSDARG00000079785 313 1 - - - - - 1.000 - - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
61. txndc11 ENSDARG00000101291 589 1 - - - - - 1.000 - - - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
62. l2hgdh ENSDARG00000060500 713 1 - - - - - 1.000 - - - L-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-090319-6]
63. pax5 ENSDARG00000037383 319 1 - - - - - 1.000 - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
64. si:dkeyp-19e1.3 ENSDARG00000051836 531 1 - - - - - 1.000 - - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
65. mea1 ENSDARG00000039820 589 1 - - - - - 1.000 - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
66. socs3a ENSDARG00000025428 349 1 - - - - - 1.000 - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
67. ube2z ENSDARG00000029215 1059 1 - - - - - 1.000 - - - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
68. fam84b ENSDARG00000032859, ENSDARG00000116831 386 1 - - - - - 1.000 - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
69. PLCL2 ENSDARG00000098826 596 1 - - - - - 1.000 - - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
70. CU929219.1 CU929219.1 383 1 - - - - - 1.000 - - -
71. her9 ENSDARG00000056438, ENSDARG00000115775 3099 0.999 - - - - - 0.999 - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
72. tmem183a ENSDARG00000044899 491 0.999 - - - - - 0.999 - - - transmembrane protein 183A [Source:ZFIN;Acc:ZDB-GENE-050327-5]
73. zgc:112148 ENSDARG00000001804 386 0.999 - - - - - 0.999 - - - zgc:112148 [Source:ZFIN;Acc:ZDB-GENE-050417-235]
74. csrp1a ENSDARG00000006603 5188 0.999 - - - - - 0.999 - - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
75. gbx1 ENSDARG00000071418 871 0.999 - - - - - 0.999 - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
76. cab39 ENSDARG00000043451 1326 0.999 - - - - - 0.999 - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
77. b4galt1 ENSDARG00000002634 1076 0.999 - - - - - 0.999 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
78. ppp2r5eb ENSDARG00000069118 1902 0.999 - - - - - 0.999 - - - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
79. PPAP2A PPAP2A 2409 0.999 - - - - - 0.999 - - -
80. CZv9_NA991H1orf52 CZv9_NA991H1orf52 1723 0.999 - - - - - 0.999 - - -
81. cpz ENSDARG00000075521 2356 0.999 - - - - - 0.999 - - - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
82. evla ENSDARG00000035650 854 0.999 - - - - - 0.999 - - - Enah/Vasp-like a [Source:ZFIN;Acc:ZDB-GENE-000607-65]
83. si:ch211-138k19.2 si:ch211-138k19.2 398 0.999 - - - - - 0.999 - - -
84. grip1 ENSDARG00000015053 1275 0.999 - - - - - 0.999 - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
85. efemp2a ENSDARG00000094324 39261 0.999 - - - - - 0.999 - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
86. acaa1 ENSDARG00000004687 557 0.999 - - - - - 0.999 - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
87. trappc5 ENSDARG00000026068 1350 0.999 - - - - - 0.999 - - - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
88. usp36 ENSDARG00000032327 1884 0.999 - - - - - 0.999 - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
89. PIK3CA_1 PIK3CA_1 4065 0.998 - - - - - 0.998 - - -
90. gdpd3a ENSDARG00000074466 1739 0.998 - - - - - 0.998 - - - glycerophosphodiester phosphodiesterase domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2279]
91. ankrd13a ENSDARG00000061901 1192 0.998 - - - - - 0.998 - - - ankyrin repeat domain 13A [Source:ZFIN;Acc:ZDB-GENE-030131-1833]
92. gsr ENSDARG00000019236, ENSDARG00000114106 1149 0.998 - - - - - 0.998 - - - glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
93. ifi30 ENSDARG00000056378, ENSDARG00000112359 2472 0.998 - - - - - 0.998 - - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
94. GIGYF1 1830 0.998 - - - - - 0.998 - - - GRB10 interacting GYF protein 1, transcript variant X6
95. ddx6 ENSDARG00000061338 2514 0.998 - - - - - 0.998 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
96. MRPL52 ENSDARG00000090568 4402 0.998 - - - - - 0.998 - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
97. plekhh1 ENSDARG00000053835 2123 0.998 - - - - - 0.998 - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
98. dctn3 ENSDARG00000041363 3351 0.998 - - - - - 0.998 - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
99. HOMER2 ENSDARG00000059349 2264 0.998 - - - - - 0.998 - - - homer scaffold protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-417]
100. insra ENSDARG00000011948 1258 0.998 - - - - - 0.998 - - - insulin receptor a [Source:ZFIN;Acc:ZDB-GENE-020503-3]

There are 1307 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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