Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdk12

Gene Name Gene ID Reads Annotation
cdk12 ENSDARG00000063726 1220 cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]










Genes with expression patterns similar to cdk12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk12 ENSDARG00000063726 1220 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
2. med25 ENSDARG00000038005, ENSDARG00000115713 1305 2.493 - 0.838 - - - 0.909 0.746 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
3. nin ENSDARG00000060298 1558 2.422 - - - - - 0.833 - 0.830 0.759 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
4. bysl ENSDARG00000001057 2621 2.369 - 0.792 - - 0.872 - 0.705 - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
5. lppr3a lppr3a 1294 2.336 - 0.705 - - 0.886 - 0.745 - -
6. lmx1ba ENSDARG00000104815 376 2.332 - 0.708 - - - 0.822 - 0.802 - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
7. wu:fb30e12 wu:fb30e12 1254 2.26 - - - - - 0.791 0.766 - 0.703
8. zc3h7a ENSDARG00000102195 564 2.244 - 0.742 - - - 0.708 - 0.794 - zinc finger CCCH-type containing 7A [Source:ZFIN;Acc:ZDB-GENE-040426-2776]
9. e4f1 ENSDARG00000038243 160 1.798 - - - 0.892 - 0.906 - - - E4F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050913-103]
10. ablim1a ENSDARG00000060149 228 1.771 - - - - - 0.881 - 0.890 - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
11. rmnd5b ENSDARG00000043359 3054 1.765 - - - - 0.975 0.790 - - - required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
12. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.757 - - - - 0.885 0.872 - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
13. zgc:171566 ENSDARG00000105118 340 1.736 0.833 - - - - 0.903 - - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
14. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1.701 - - - 0.841 - 0.860 - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
15. greb1 ENSDARG00000070794 1741 1.696 - - - - 0.874 - 0.822 - - growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]
16. CDC42BPA CDC42BPA 295 1.694 - 0.782 - - - 0.912 - - -
17. ARHGAP23 ARHGAP23 3946 1.69 - - - - 0.863 0.827 - - -
18. rad21b ENSDARG00000035655 87 1.682 - - - - - 0.895 - 0.787 - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
19. ubp1 ENSDARG00000018000 1047 1.678 - - - - - 0.913 - 0.765 - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
20. gnav1 ENSDARG00000043006 305 1.674 - 0.834 - - - 0.840 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
21. ksr2 ENSDARG00000094526 134 1.674 - - - - - 0.920 - 0.754 - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
22. b2m ENSDARG00000053136 215 1.673 - - - 0.831 - 0.842 - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
23. LINGO2 LINGO2 300 1.673 - - - - - 0.884 - 0.789 -
24. hecw1 hecw1 241 1.67 - - - - - 0.915 0.755 - -
25. si:dkey-270b7.1 si:dkey-270b7.1 83 1.655 - - - - - 0.920 - 0.735 -
26. si:ch211-215p11.4 si:ch211-215p11.4 67 1.654 - - - - - 0.883 - 0.771 -
27. asah1a ENSDARG00000037091, ENSDARG00000112187 390 1.653 - - - - 0.889 0.764 - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
28. ildr2 ENSDARG00000014180 791 1.653 - - - - - 0.929 0.724 - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
29. cenpk ENSDARG00000039616 744 1.651 - - - - - 0.901 - 0.750 - centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
30. scocb ENSDARG00000002217 1844 1.648 - - - - 0.885 0.763 - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
31. plp1a ENSDARG00000103732 3544 1.643 - - - - 0.878 0.765 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
32. gb:ai877918 ENSDARG00000100179 173 1.64 - 0.757 - 0.883 - - - - - expressed sequence AI877918 [Source:ZFIN;Acc:ZDB-GENE-090506-8]
33. CU928083.1 ENSDARG00000097907 1279 1.638 - - - 0.914 - 0.724 - - -
34. KIF21A_1 KIF21A_1 237 1.631 - 0.763 - - - 0.868 - - -
35. CU638738.1 CU638738.1 131 1.631 - 0.734 - - - 0.897 - - -
36. efnb2b_1 ENSDARG00000074050 1094 1.631 - - - - - 0.847 0.784 - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
37. BX511021.3 ENSDARG00000117414 592 1.63 - - - 0.719 - 0.911 - - -
38. taf6l ENSDARG00000079684 1408 1.629 - 0.809 - - - - 0.820 - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
39. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.629 - 0.750 - - - 0.879 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
40. exoc6 ENSDARG00000020521 1533 1.628 - - - - - 0.897 0.731 - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]
41. C7H4orf48 C7H4orf48 1455 1.621 - - - - 0.887 0.734 - - -
42. PROCA1 ENSDARG00000069823 343 1.616 - 0.734 - - - 0.882 - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
43. exoc3l4 ENSDARG00000058180 923 1.615 - - - 0.851 - 0.764 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
44. fancd2 ENSDARG00000053574 247 1.612 - - - - - 0.884 0.728 - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
45. nsl1 ENSDARG00000024471 1269 1.611 - 0.795 - - - - - 0.816 - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
46. drgx ENSDARG00000069329 610 1.609 - - - 0.722 0.887 - - - - dorsal root ganglia homeobox [Source:ZFIN;Acc:ZDB-GENE-070330-1]
47. mbd3a ENSDARG00000061774 4047 1.608 - - - - 0.838 - - - 0.770 methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
48. kitlga ENSDARG00000070917 155 1.604 - - - 0.711 - 0.893 - - - kit ligand a [Source:ZFIN;Acc:ZDB-GENE-070424-1]
49. h2afy2_1 ENSDARG00000087897 9887 1.603 - - - - 0.808 0.795 - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
50. dnajb9a ENSDARG00000052072 578 1.602 - 0.779 - 0.823 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
51. CELF6 ENSDARG00000101933 228 1.601 - - - 0.794 - 0.807 - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
52. si:dkeyp-53d3.6 204 1.599 - - - 0.870 - 0.729 - - - si:dkeyp-53d3.6, transcript variant X1
53. arhgap11a ENSDARG00000100019 1642 1.594 - - - - - 0.793 - 0.801 - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
54. itm2cb ENSDARG00000039650 716 1.591 - - - - - 0.832 - 0.759 - integral membrane protein 2Cb [Source:ZFIN;Acc:ZDB-GENE-030131-7806]
55. crabp2a_1 ENSDARG00000073978 888 1.588 - 0.741 - - - 0.847 - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
56. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.588 - - - - 0.873 - 0.715 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
57. anapc10 ENSDARG00000090152 1406 1.585 - - - - 0.883 - 0.702 - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
58. slc1a1 ENSDARG00000020212 104 1.584 - - - - - 0.813 - 0.771 - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
59. RNF38 ENSDARG00000062055 3901 1.581 - - - - 0.873 0.708 - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
60. CR388231.1 ENSDARG00000098710 153 1.578 - 0.704 - - - 0.874 - - -
61. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.577 0.720 - - - - 0.857 - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
62. ndrg3a ENSDARG00000013087 5581 1.576 - - - - - 0.856 0.720 - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
63. ebag9 ENSDARG00000040021 2217 1.573 - - - 0.750 - 0.823 - - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
64. NECAB3 ENSDARG00000074794 379 1.57 - - - - - 0.805 0.765 - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
65. ATG4D ATG4D 648 1.568 0.744 - - - - 0.824 - - -
66. CT030046.1 CT030046.1 190 1.568 - - - - - 0.860 0.708 - -
67. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.559 - - - - - 0.844 - - 0.715 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
68. zgc:92630 ENSDARG00000004141, ENSDARG00000113420 147 1.551 - - - 0.828 - - - 0.723 - zgc:92630 [Source:ZFIN;Acc:ZDB-GENE-040718-449]
69. BX927294.1 BX927294.1 361 1.55 - - - - - 0.824 - 0.726 -
70. slc44a5b ENSDARG00000057419 534 1.55 - - - - - 0.825 0.725 - - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
71. DTX4 ENSDARG00000076302 2642 1.55 - - - 0.714 - 0.836 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
72. GPR156 ENSDARG00000086215 126 1.548 - - - - - 0.833 - 0.715 - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
73. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.547 - - - - - 0.837 0.710 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
74. tenm1 ENSDARG00000003403 148 1.54 - - - - - 0.773 - 0.767 - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
75. tnrc5 412 1.539 - - - - - 0.778 - 0.761 - trinucleotide repeat containing 5
76. tspan2 tspan2 948 1.539 - - - - - 0.718 0.821 - -
77. sae1 ENSDARG00000010487 2028 1.539 - 0.719 - - - 0.820 - - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
78. arhgef2 ENSDARG00000075819 2173 1.535 - - - - - 0.790 - - 0.745 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
79. dnal1 ENSDARG00000034042 339 1.532 - - - - - 0.823 0.709 - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
80. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 1.532 - - - - - 0.816 0.716 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
81. atxn1b ENSDARG00000060862 345 1.53 - - - - - 0.793 - 0.737 - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
82. cog8 ENSDARG00000002798 229 1.527 - - - 0.800 - 0.727 - - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
83. h2afva ENSDARG00000068820 16427 1.525 - - - - 0.807 - 0.718 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
84. vps39 ENSDARG00000074471 684 1.524 - - - - - 0.808 - 0.716 - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
85. usb1 ENSDARG00000003841 524 1.524 - - - - - 0.773 - 0.751 - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
86. BX927349.2 BX927349.2 325 1.523 - - - 0.780 - - 0.743 - -
87. ssh2b ENSDARG00000098955 614 1.521 - - - 0.747 - - - 0.774 - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
88. SENP2 ENSDARG00000073837 1411 1.52 - 0.793 - - - 0.727 - - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
89. dhrs11a ENSDARG00000046090, ENSDARG00000112531 411 1.519 - 0.799 - 0.720 - - - - - dehydrogenase/reductase (SDR family) member 11a [Source:ZFIN;Acc:ZDB-GENE-060929-324]
90. mdkb ENSDARG00000020708 5393 1.516 - - - - - 0.800 0.716 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
91. KIF20B KIF20B 800 1.514 - 0.712 - - - - - 0.802 -
92. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 1.512 - - - - - - 0.779 - 0.733 Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
93. nrcam nrcam 397 1.509 - - - 0.770 - 0.739 - - -
94. CR382298.3 CR382298.3 666 1.508 - - - 0.760 - 0.748 - - -
95. orc6 ENSDARG00000075682 1382 1.494 0.736 0.758 - - - - - - - origin recognition complex, subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2976]
96. ZNF740 ZNF740 676 1.49 0.766 - - - - - - 0.724 -
97. ppp1r14bb ENSDARG00000030161 2349 1.489 - - - - - 0.725 - 0.764 - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
98. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.486 - 0.762 - - - - 0.724 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
99. tox4 tox4 1671 1.486 - - - - - 0.785 0.701 - -
100. bmp2a ENSDARG00000013409 303 1.485 - 0.785 - - - 0.700 - - - bone morphogenetic protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-388]

There are 2112 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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