Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdh6

Gene Name Gene ID Reads Annotation
cdh6 ENSDARG00000014522 5492 cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]










Genes with expression patterns similar to cdh6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh6 ENSDARG00000014522 5492 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
2. PCOLCE_1 PCOLCE_1 2148 3.226 0.734 - - - - 0.723 0.827 - 0.942
3. slc38a7 ENSDARG00000012002 2219 2.415 - 0.824 - - - 0.778 - 0.813 - solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
4. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 2.318 - 0.764 - - - 0.723 - 0.831 - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
5. tcn2l tcn2l 2428 2.237 - 0.722 - - - 0.770 0.745 - -
6. serpina10a ENSDARG00000005924 1177 1.864 - - - - - 0.883 - - 0.981 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a [Source:ZFIN;Acc:ZDB-GENE-041014-246]
7. CABZ01007794.1 CABZ01007794.1 14290 1.849 - 0.893 - - - - - - 0.956
8. ptplb ptplb 6135 1.802 - - - - - - 0.836 - 0.966
9. dgcr14 1608 1.794 - - - - - - - 0.812 0.982 DiGeorge syndrome critical region gene 14
10. btbd10b ENSDARG00000020252 7251 1.743 - - - - - - - 0.769 0.974 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
11. PIK3CA_1 PIK3CA_1 4065 1.738 - - - - - - - 0.758 0.980
12. etv5b ENSDARG00000044511, ENSDARG00000113744 1967 1.737 - - - - - 0.906 0.831 - - ets variant 5b [Source:ZFIN;Acc:ZDB-GENE-991228-4]
13. col12a1a ENSDARG00000078322 1833 1.702 - - - - - 0.873 0.829 - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
14. slc39a5 ENSDARG00000079525 2157 1.696 - - - - - 0.840 0.856 - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
15. ftr82 ENSDARG00000055647 3302 1.695 - - - - - - 0.714 - 0.981 finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
16. C6H2orf40 C6H2orf40 4224 1.693 - - 0.728 - - - - - 0.965
17. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.693 - - - - - 0.711 - - 0.982 E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
18. slc30a8 ENSDARG00000100917 761 1.676 - - - - - 0.824 0.852 - - solute carrier family 30 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060315-10]
19. pck1 ENSDARG00000013522 1657 1.674 - - - - - 0.727 0.947 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
20. BX004812.1 ENSDARG00000096968 5467 1.672 - - - - - 0.801 0.871 - -
21. ca15a ENSDARG00000015654 2657 1.658 - - - - - 0.792 0.866 - - carbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
22. rasd1 ENSDARG00000019274 1898 1.647 - 0.793 - - - - 0.854 - - RAS, dexamethasone-induced 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1473]
23. nudt22 ENSDARG00000071671 411 1.637 - - - - - 0.830 - 0.807 - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
24. BX005001.1 BX005001.1 741 1.633 - - - - - 0.723 0.910 - -
25. egfra ENSDARG00000013847 2912 1.628 - 0.863 - - - - 0.765 - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
26. tmem50a ENSDARG00000015757 3244 1.611 - - 0.742 - - - - 0.869 - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
27. cfhl2 ENSDARG00000103760, ENSDARG00000110252 579 1.608 - - - - - 0.831 0.777 - - complement factor H like 2 [Source:ZFIN;Acc:ZDB-GENE-041114-123]
28. bri3 ENSDARG00000086332 8405 1.606 - - - - - - 0.764 0.842 - brain protein I3 [Source:ZFIN;Acc:ZDB-GENE-030131-3038]
29. angptl3 ENSDARG00000044365 574 1.604 0.780 - - - - - 0.824 - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
30. zgc:110239 ENSDARG00000077664 7015 1.604 0.776 - - - - - 0.828 - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
31. TM6SF2 ENSDARG00000029057 1239 1.604 - 0.826 - - - - 0.778 - - transmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]
32. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 1.602 - - - - - 0.893 0.709 - - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
33. ctps1a ENSDARG00000030700 3868 1.597 - - - - - 0.802 0.795 - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
34. dio3b ENSDARG00000095767 521 1.593 - - - - - 0.767 0.826 - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
35. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 1.592 - 0.850 - - - - 0.742 - - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
36. lims1 ENSDARG00000026985 2072 1.591 - - - - - 0.845 0.746 - - LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
37. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.589 - 0.770 - - - - - 0.819 - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
38. zgc:158309 zgc:158309 2696 1.587 - - - - - 0.732 0.855 - -
39. fam102ab ENSDARG00000016866, ENSDARG00000113063 1080 1.587 - 0.709 - - - 0.878 - - - family with sequence similarity 102, member Ab [Source:ZFIN;Acc:ZDB-GENE-060929-412]
40. itga5 ENSDARG00000006353 1876 1.582 - - - - - 0.732 0.850 - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
41. cpvl ENSDARG00000056480 2115 1.58 - - - - - 0.751 0.829 - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
42. foxi3a ENSDARG00000055926 749 1.577 - - - - - 0.776 0.801 - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
43. edem1 ENSDARG00000025094 1343 1.574 0.798 - - - - 0.776 - - - ER degradation enhancer, mannosidase alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-808]
44. nans nans 1365 1.571 - 0.735 - - - - - 0.836 -
45. CPN2 CPN2 682 1.563 - 0.847 - - - - 0.716 - -
46. adpgk2 ENSDARG00000062785 8229 1.56 - - - - - 0.735 - 0.825 - ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
47. pqlc2 ENSDARG00000043624 1056 1.558 - 0.723 - - - 0.835 - - - PQ loop repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-050306-4]
48. lrp1b lrp1b 3216 1.555 - - 0.795 - - 0.760 - - -
49. atp6v0ca ENSDARG00000057853 23277 1.554 - - - - - 0.732 0.822 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
50. hoxc13b ENSDARG00000113877 549 1.551 - - - - 0.751 - - 0.800 - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
51. hoxc12a ENSDARG00000070352 7409 1.55 - - - - - 0.751 0.799 - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
52. asmtl ENSDARG00000021433, ENSDARG00000114151 550 1.55 - - - - - 0.777 0.773 - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
53. slc47a1 ENSDARG00000046012 1426 1.55 - - - - - 0.785 0.765 - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
54. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.549 - 0.764 - - - - - 0.785 - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
55. pla2g6 ENSDARG00000060921, ENSDARG00000114917 499 1.547 - - - - - 0.775 0.772 - - phospholipase A2, group VI (cytosolic, calcium-independent) [Source:ZFIN;Acc:ZDB-GENE-040426-2079]
56. nadkb ENSDARG00000060362 957 1.546 - - - - - 0.801 0.745 - - NAD kinase b [Source:ZFIN;Acc:ZDB-GENE-061103-433]
57. phf3 ENSDARG00000034768 1372 1.543 - - 0.718 - - - - 0.825 - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
58. nt5dc2 ENSDARG00000059646 3878 1.539 - - - - - 0.813 0.726 - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
59. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 1.535 - - - - - 0.733 0.802 - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
60. si:dkey-117n7.3 ENSDARG00000092944 2518 1.535 - - - - - - 0.757 0.778 - si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
61. cd9a ENSDARG00000005842 1708 1.534 - - - - - 0.749 0.785 - - CD9 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-1175]
62. cnn3a ENSDARG00000099510 6063 1.529 - - - - - - 0.708 0.821 - calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
63. pcyt1bb ENSDARG00000104207 1204 1.528 - 0.761 - - - - 0.767 - - phosphate cytidylyltransferase 1, choline, beta b [Source:ZFIN;Acc:ZDB-GENE-051120-48]
64. slc44a2 ENSDARG00000037059 1903 1.528 - 0.824 - - - - 0.704 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
65. cebpb ENSDARG00000042725 3921 1.527 - 0.782 - - - - 0.745 - - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
66. epdl2 ENSDARG00000055539 1895 1.527 - 0.815 - - - 0.712 - - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
67. ywhaqb ENSDARG00000023323 28138 1.524 - - - - - 0.770 0.754 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
68. esrp1 ENSDARG00000011245 2097 1.523 - - - - - 0.742 - 0.781 - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
69. TMEM150A_2 TMEM150A_2 739 1.52 - - - - - - 0.738 0.782 -
70. wu:fb52c12 wu:fb52c12 763 1.519 - - 0.713 - - 0.806 - - -
71. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 1.517 - - - - - 0.779 0.738 - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
72. si:dkey-11f4.16 ENSDARG00000099799 121 1.516 0.719 - - - - 0.797 - - - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
73. zgc:194887 ENSDARG00000098586 437 1.515 - - - - - 0.716 0.799 - - zgc:194887 [Source:ZFIN;Acc:ZDB-GENE-081022-162]
74. mpp1 ENSDARG00000105287 1359 1.513 - 0.763 - - - 0.750 - - - membrane protein, palmitoylated 1 [Source:ZFIN;Acc:ZDB-GENE-031113-4]
75. pepd ENSDARG00000102249 2644 1.512 - 0.731 - - - 0.781 - - - peptidase D [Source:ZFIN;Acc:ZDB-GENE-030131-9444]
76. rnf10 ENSDARG00000079687 6768 1.512 - - 0.759 - - 0.753 - - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
77. iqgap2 ENSDARG00000060010 494 1.509 - 0.782 - - - - 0.727 - - IQ motif containing GTPase activating protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2878]
78. rapgef2 ENSDARG00000005482 2586 1.507 - - 0.729 - - - - 0.778 - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
79. CREB3L4 1085 1.507 - - 0.723 - - 0.784 - - - cAMP responsive element binding protein 3-like 4
80. si:ch211-161h7.4 ENSDARG00000087238 4399 1.502 - - 0.755 - - - 0.747 - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
81. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.5 - - 0.724 - - - 0.776 - - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
82. kcnj1a.5 ENSDARG00000089060 617 1.498 - 0.771 - - - - 0.727 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-050420-120]
83. rtf1 ENSDARG00000008947 6596 1.498 - - 0.745 - - - - 0.753 - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
84. lamp2 ENSDARG00000014914 5035 1.497 0.730 0.767 - - - - - - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
85. hectd3 ENSDARG00000038905 1170 1.491 - - - - - 0.720 - 0.771 - HECT domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-031118-179]
86. rarab ENSDARG00000034893, ENSDARG00000111757 2151 1.489 - 0.717 - - - - 0.772 - - retinoic acid receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-980526-72]
87. fabp2 ENSDARG00000006427, ENSDARG00000110230 56349 1.485 - 0.706 - - - - 0.779 - - fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
88. LDLR LDLR 838 1.484 - - - - - 0.751 0.733 - -
89. tiam1a ENSDARG00000078430 2482 1.483 - - - - - 0.727 0.756 - - T cell lymphoma invasion and metastasis 1a [Source:ZFIN;Acc:ZDB-GENE-080325-1]
90. pum1 ENSDARG00000099256 5017 1.483 - - 0.765 - - - 0.718 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
91. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 1.482 - 0.702 - - - - - 0.780 - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
92. MTUS1 MTUS1 1334 1.481 - 0.762 - - - - 0.719 - -
93. RBM47 ENSDARG00000061985 2498 1.481 - - - - - 0.729 0.752 - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
94. EPS8L3 EPS8L3 111 1.48 - - - - - 0.746 0.734 - -
95. suclg2 ENSDARG00000044914 7950 1.479 - - - - - 0.718 0.761 - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
96. gclc ENSDARG00000013095 2146 1.479 - 0.765 - - - - 0.714 - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
97. rhoua ENSDARG00000019709 1506 1.479 - - - - - 0.716 0.763 - - ras homolog family member Ua [Source:ZFIN;Acc:ZDB-GENE-040618-3]
98. pnpla7b ENSDARG00000040002 1217 1.477 - - - - - 0.742 0.735 - - patatin-like phospholipase domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-050309-66]
99. C10H8orf4 C10H8orf4 361 1.474 - - - - - 0.772 0.702 - -
100. neu1 ENSDARG00000008832 2848 1.474 - 0.773 - - - - 0.701 - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]

There are 1254 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA