Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdh4_1

Gene Name Gene ID Reads Annotation
cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]










Genes with expression patterns similar to cdh4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 7 1.000 1.000 1.000 1.000 1.000 1.000 - - 1.000 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
2. dnaaf2 ENSDARG00000103132 24 2 1.000 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
3. ttr ENSDARG00000037191 11 1.969 1.000 - - 0.969 - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
4. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.928 1.000 0.928 - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
5. GRID1 GRID1 51 1.917 1.000 0.917 - - - - - - -
6. PAMR1 ENSDARG00000093480 40 1.914 1.000 0.914 - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
7. iqcc ENSDARG00000092483 65 1.823 0.917 0.906 - - - - - - - IQ motif containing C [Source:ZFIN;Acc:ZDB-GENE-090313-325]
8. si:ch211-141e20.5 si:ch211-141e20.5 7 1.802 - 1.000 - 0.802 - - - - -
9. bon bon 20 1.778 1.000 - - - 0.778 - - - -
10. blnk ENSDARG00000042722 56 1.761 - 1.000 - - - 0.761 - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
11. s100b ENSDARG00000057598 41 1.754 0.826 0.928 - - - - - - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
12. spi1b ENSDARG00000000767 88 1.73 - 1.000 - 0.730 - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
13. d2hgdh ENSDARG00000060210 362 1.73 0.883 0.847 - - - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
14. si:dkey-111e8.5 ENSDARG00000093960 28 1.719 1.000 - - - 0.719 - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
15. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1.719 - 1.000 - - 0.719 - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
16. CR936465.1 CR936465.1 7 1.713 - - - 0.969 0.744 - - - -
17. CU571315.2 ENSDARG00000101956 15 1.708 - 1.000 - - - 0.708 - - -
18. CU469532.1 CU469532.1 31 1.708 - 1.000 - - - 0.708 - - -
19. polr2b ENSDARG00000098783 90 1.704 - 1.000 - - - - - - 0.704 polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
20. CR376787.3 CR376787.3 11 1.7 - - - 0.968 - - - - 0.732
21. si:ch211-15j21.2 si:ch211-15j21.2 13 1.638 - 0.906 - - - - - - 0.732
22. BRSK2 BRSK2 66 1.608 0.840 0.768 - - - - - - -
23. si:dkey-209n16.2 ENSDARG00000095914 27 1.602 - 0.858 - 0.744 - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
24. BX005472.1 BX005472.1 2 1.558 - - - - 0.850 0.708 - - -
25. TRIM14_10 TRIM14_10 9 1.553 - - 0.701 0.852 - - - - -
26. tsnax ENSDARG00000115282 99 1.504 0.702 - - - - 0.802 - - - translin-associated factor X [Source:ZFIN;Acc:ZDB-GENE-050913-80]
27. MPP3 MPP3 13 1.471 - - 0.763 - - 0.708 - - -
28. STK31 ENSDARG00000056339 37 1.433 0.725 - - - - 0.708 - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
29. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
30. SCN1B SCN1B 191 1 1.000 - - - - - - - -
31. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1 - 1.000 - - - - - - -
32. AC024175.11 AC024175.11 12 1 1.000 - - - - - - - -
33. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
34. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
35. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
36. hepacam 73 1 1.000 - - - - - - - - hepatic and glial cell adhesion molecule, transcript variant X2
37. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
38. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
39. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
40. CR790388.1_1 ENSDARG00000078922 1 1 1.000 - - - - - - - -
41. ryr2b ENSDARG00000003706 6 1 - 1.000 - - - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
42. mipol1 ENSDARG00000104845 6 1 - 1.000 - - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
43. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 1.000 - - - - - - - -
44. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
45. si:ch211-235f12.2 ENSDARG00000092119 31 1 - 1.000 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
46. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
47. BX539307.1 ENSDARG00000071588 2 1 - 1.000 - - - - - - -
48. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
49. zgc:113142 ENSDARG00000038969 74 1 1.000 - - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
50. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
51. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
52. efhb ENSDARG00000069703 9 1 - 1.000 - - - - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
53. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 1.000 - - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
54. CABZ01086354.1 CABZ01086354.1 22 1 - 1.000 - - - - - - -
55. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
56. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - 1.000 - - - - - - -
57. zgc:113060 zgc:113060 63 1 - - - - - 1.000 - - -
58. si:dkey-28d5.13 ENSDARG00000077260 3 1 - 1.000 - - - - - - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
59. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
60. zgc:162962 ENSDARG00000116765 29 1 1.000 - - - - - - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
61. sostdc1a ENSDARG00000068892 127 1 1.000 - - - - - - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
62. 5S_rRNA_15 5S_rRNA_15 9 1 - 1.000 - - - - - - -
63. si:dkey-102m7.3 ENSDARG00000100366 27 1 - 1.000 - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
64. CABZ01034707.1 CABZ01034707.1 122 1 - 1.000 - - - - - - -
65. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 1.000 - - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
66. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
67. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
68. CABZ01112249.1 CABZ01112249.1 1 1 - - - - - 1.000 - - -
69. npffl ENSDARG00000045016 34 1 - 1.000 - - - - - - - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
70. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
71. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
72. glipr1b ENSDARG00000030078 73 1 1.000 - - - - - - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
73. RECK ENSDARG00000090039 15 1 1.000 - - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
74. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
75. svopb ENSDARG00000014951 1 1 - 1.000 - - - - - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
76. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
77. hbaa2 ENSDARG00000069735 10 1 1.000 - - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
78. FAT1 FAT1 689 1 1.000 - - - - - - - -
79. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
80. CABZ01033130.1 CABZ01033130.1 5 1 1.000 - - - - - - - -
81. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
82. zgc:174919 zgc:174919 24 1 - 1.000 - - - - - - -
83. ZDHHC12 ZDHHC12 29 1 - 1.000 - - - - - - -
84. CR382327.4 CR382327.4 143 1 - 1.000 - - - - - - -
85. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
86. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
87. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
88. slc9a5 ENSDARG00000078560 76 1 - 1.000 - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
89. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 1 - 1.000 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
90. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
91. si:ch211-274k16.4 si:ch211-274k16.4 6 1 1.000 - - - - - - - -
92. SLC37A4 SLC37A4 10 1 - 1.000 - - - - - - -
93. FANCA ENSDARG00000098241 39 1 - 1.000 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
94. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 1.000 - - - - - - - -
95. nrp2a ENSDARG00000096546 2 1 - 1.000 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
96. CABZ01079015.1 CABZ01079015.1 10 1 1.000 - - - - - - - -
97. CU463790.1 CU463790.1 60 1 1.000 - - - - - - - -
98. erap2 ENSDARG00000098618 16 1 - - - - - 1.000 - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
99. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
100. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]

There are 750 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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