Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdh4_1

Gene Name Gene ID Reads Annotation
cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]










Genes with expression patterns similar to cdh4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 7 1.000 1.000 1.000 1.000 1.000 1.000 - - 1.000 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
2. dnaaf2 ENSDARG00000103132 24 2 1.000 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
3. ttr ENSDARG00000037191 11 1.969 1.000 - - 0.969 - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
4. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.928 1.000 0.928 - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
5. GRID1 GRID1 51 1.917 1.000 0.917 - - - - - - -
6. PAMR1 ENSDARG00000093480 40 1.914 1.000 0.914 - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
7. iqcc ENSDARG00000092483 65 1.823 0.917 0.906 - - - - - - - IQ motif containing C [Source:ZFIN;Acc:ZDB-GENE-090313-325]
8. si:ch211-141e20.5 si:ch211-141e20.5 7 1.802 - 1.000 - 0.802 - - - - -
9. bon bon 20 1.778 1.000 - - - 0.778 - - - -
10. blnk ENSDARG00000042722 56 1.761 - 1.000 - - - 0.761 - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
11. s100b ENSDARG00000057598 41 1.754 0.826 0.928 - - - - - - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
12. spi1b ENSDARG00000000767 88 1.73 - 1.000 - 0.730 - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
13. d2hgdh ENSDARG00000060210 362 1.73 0.883 0.847 - - - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
14. si:dkey-111e8.5 ENSDARG00000093960 28 1.719 1.000 - - - 0.719 - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
15. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1.719 - 1.000 - - 0.719 - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
16. CR936465.1 CR936465.1 7 1.713 - - - 0.969 0.744 - - - -
17. CU571315.2 ENSDARG00000101956 15 1.708 - 1.000 - - - 0.708 - - -
18. CU469532.1 CU469532.1 31 1.708 - 1.000 - - - 0.708 - - -
19. polr2b ENSDARG00000098783 90 1.704 - 1.000 - - - - - - 0.704 polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
20. CR376787.3 CR376787.3 11 1.7 - - - 0.968 - - - - 0.732
21. si:ch211-15j21.2 si:ch211-15j21.2 13 1.638 - 0.906 - - - - - - 0.732
22. BRSK2 BRSK2 66 1.608 0.840 0.768 - - - - - - -
23. si:dkey-209n16.2 ENSDARG00000095914 27 1.602 - 0.858 - 0.744 - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
24. BX005472.1 BX005472.1 2 1.558 - - - - 0.850 0.708 - - -
25. TRIM14_10 TRIM14_10 9 1.553 - - 0.701 0.852 - - - - -
26. tsnax ENSDARG00000115282 99 1.504 0.702 - - - - 0.802 - - - translin-associated factor X [Source:ZFIN;Acc:ZDB-GENE-050913-80]
27. MPP3 MPP3 13 1.471 - - 0.763 - - 0.708 - - -
28. STK31 ENSDARG00000056339 37 1.433 0.725 - - - - 0.708 - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
29. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
30. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
31. CR751224.1 ENSDARG00000106298 8 1 1.000 - - - - - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
32. LINS LINS 42 1 - 1.000 - - - - - - -
33. snai3 ENSDARG00000031243 31 1 - 1.000 - - - - - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
34. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
35. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
36. si:dkey-187i8.2 ENSDARG00000096624 8 1 1.000 - - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
37. eif4e1b ENSDARG00000014565 12 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
38. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
39. LECT2 LECT2 4 1 - 1.000 - - - - - - -
40. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 1 - 1.000 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
41. CABZ01034126.1 CABZ01034126.1 2 1 - 1.000 - - - - - - -
42. si:dkey-102m7.3 ENSDARG00000100366 27 1 - 1.000 - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
43. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
44. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
45. PHF1 ENSDARG00000057439 1 1 - 1.000 - - - - - - - PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
46. nog2 ENSDARG00000043066 233 1 - 1.000 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
47. si:dkey-47k16.4_1 ENSDARG00000113005 5 1 1.000 - - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
48. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 1.000 - - - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
49. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
50. CU896691.3 ENSDARG00000109630 1 1 1.000 - - - - - - - -
51. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
52. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
53. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
54. zgc:162962 ENSDARG00000116765 29 1 1.000 - - - - - - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
55. CABZ01086354.1 CABZ01086354.1 22 1 - 1.000 - - - - - - -
56. klc4_1 ENSDARG00000086985 22 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
57. efhb ENSDARG00000069703 9 1 - 1.000 - - - - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
58. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
59. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
60. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
61. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 1.000 - - - - - - - -
62. si:ch73-25f10.6 ENSDARG00000091932 1 1 - 1.000 - - - - - - - si:ch73-25f10.6 [Source:ZFIN;Acc:ZDB-GENE-100922-192]
63. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
64. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
65. col17a1b ENSDARG00000079011 143 1 1.000 - - - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
66. pnx ENSDARG00000025899 25 1 1.000 - - - - - - - - posterior neuron-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-030328-42]
67. hbaa2 ENSDARG00000069735 10 1 1.000 - - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
68. BX511066.4 BX511066.4 6 1 1.000 - - - - - - - -
69. CABZ01079015.1 CABZ01079015.1 10 1 1.000 - - - - - - - -
70. si:ch211-196c10.11 si:ch211-196c10.11 2 1 1.000 - - - - - - - -
71. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
72. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
73. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - 1.000 - - - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
74. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
75. angptl1 angptl1 82 1 1.000 - - - - - - - -
76. FAT1 FAT1 689 1 1.000 - - - - - - - -
77. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
78. RECK ENSDARG00000090039 15 1 1.000 - - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
79. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
80. AC024175.11 AC024175.11 12 1 1.000 - - - - - - - -
81. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
82. si:ch211-235f12.2 ENSDARG00000092119 31 1 - 1.000 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
83. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
84. si:dkey-188k17.2 7 1 1.000 - - - - - - - - si:dkey-188k17.2
85. brf2 ENSDARG00000002060 81 1 - 1.000 - - - - - - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
86. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
87. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
88. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - 1.000 - - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
89. si:ch211-114l13.3 ENSDARG00000094346 2 1 1.000 - - - - - - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
90. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 1.000 - - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
91. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
92. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
93. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - 1.000 - - - - - - -
94. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
95. mipol1 ENSDARG00000104845 6 1 - 1.000 - - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
96. hic1 ENSDARG00000055493 219 1 - - - - - 1.000 - - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
97. mctp1b ENSDARG00000060871 20 1 - 1.000 - - - - - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
98. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
99. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
100. si:ch211-106h4.4 ENSDARG00000093629 9 1 - - - - - 1.000 - - - si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]

There are 750 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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