Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdh4_1

Gene Name Gene ID Reads Annotation
cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]










Genes with expression patterns similar to cdh4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 7 1.000 1.000 1.000 1.000 1.000 1.000 - - 1.000 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
2. dnaaf2 ENSDARG00000103132 24 2 1.000 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
3. ttr ENSDARG00000037191 11 1.969 1.000 - - 0.969 - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
4. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.928 1.000 0.928 - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
5. GRID1 GRID1 51 1.917 1.000 0.917 - - - - - - -
6. PAMR1 ENSDARG00000093480 40 1.914 1.000 0.914 - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
7. iqcc ENSDARG00000092483 65 1.823 0.917 0.906 - - - - - - - IQ motif containing C [Source:ZFIN;Acc:ZDB-GENE-090313-325]
8. si:ch211-141e20.5 si:ch211-141e20.5 7 1.802 - 1.000 - 0.802 - - - - -
9. bon bon 20 1.778 1.000 - - - 0.778 - - - -
10. blnk ENSDARG00000042722 56 1.761 - 1.000 - - - 0.761 - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
11. s100b ENSDARG00000057598 41 1.754 0.826 0.928 - - - - - - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
12. spi1b ENSDARG00000000767 88 1.73 - 1.000 - 0.730 - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
13. d2hgdh ENSDARG00000060210 362 1.73 0.883 0.847 - - - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
14. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1.719 - 1.000 - - 0.719 - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
15. si:dkey-111e8.5 ENSDARG00000093960 28 1.719 1.000 - - - 0.719 - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
16. CR936465.1 CR936465.1 7 1.713 - - - 0.969 0.744 - - - -
17. CU469532.1 CU469532.1 31 1.708 - 1.000 - - - 0.708 - - -
18. CU571315.2 ENSDARG00000101956 15 1.708 - 1.000 - - - 0.708 - - -
19. polr2b ENSDARG00000098783 90 1.704 - 1.000 - - - - - - 0.704 polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
20. CR376787.3 CR376787.3 11 1.7 - - - 0.968 - - - - 0.732
21. si:ch211-15j21.2 si:ch211-15j21.2 13 1.638 - 0.906 - - - - - - 0.732
22. BRSK2 BRSK2 66 1.608 0.840 0.768 - - - - - - -
23. si:dkey-209n16.2 ENSDARG00000095914 27 1.602 - 0.858 - 0.744 - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
24. BX005472.1 BX005472.1 2 1.558 - - - - 0.850 0.708 - - -
25. TRIM14_10 TRIM14_10 9 1.553 - - 0.701 0.852 - - - - -
26. tsnax ENSDARG00000115282 99 1.504 0.702 - - - - 0.802 - - - translin-associated factor X [Source:ZFIN;Acc:ZDB-GENE-050913-80]
27. MPP3 MPP3 13 1.471 - - 0.763 - - 0.708 - - -
28. STK31 ENSDARG00000056339 37 1.433 0.725 - - - - 0.708 - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
29. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
30. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
31. CU896691.3 ENSDARG00000109630 1 1 1.000 - - - - - - - -
32. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
33. ENSDARG00000096199 ENSDARG00000096199 15 1 - 1.000 - - - - - - -
34. BX547934.1 ENSDARG00000097061 35 1 1.000 - - - - - - - -
35. C1S ENSDARG00000100599 20 1 - 1.000 - - - - - - - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
36. snai3 ENSDARG00000031243 31 1 - 1.000 - - - - - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
37. SMARCAD1 SMARCAD1 104 1 1.000 - - - - - - - -
38. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
39. gbp3 ENSDARG00000003244 90 1 1.000 - - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
40. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
41. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
42. trim35-38 trim35-38 3 1 - 1.000 - - - - - - -
43. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
44. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
45. hepacam 73 1 1.000 - - - - - - - - hepatic and glial cell adhesion molecule, transcript variant X2
46. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
47. si:ch211-114l13.3 ENSDARG00000094346 2 1 1.000 - - - - - - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
48. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
49. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
50. si:ch211-235f12.2 ENSDARG00000092119 31 1 - 1.000 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
51. ZDHHC12 ZDHHC12 29 1 - 1.000 - - - - - - -
52. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
53. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
54. doc2d ENSDARG00000079962 76 1 1.000 - - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
55. opn1mw4 ENSDARG00000000638 2 1 - 1.000 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]
56. FAT1 FAT1 689 1 1.000 - - - - - - - -
57. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
58. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
59. CU463790.1 CU463790.1 60 1 1.000 - - - - - - - -
60. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
61. si:dkey-187i8.2 ENSDARG00000096624 8 1 1.000 - - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
62. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - 1.000 - - - - - - -
63. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
64. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - 1.000 - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
65. abca4a ENSDARG00000057169 27 1 1.000 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
66. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
67. CABZ01030429.1 CABZ01030429.1 1 1 1.000 - - - - - - - -
68. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
69. cacng5a ENSDARG00000003326 17 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
70. skor1a ENSDARG00000069030 19 1 - 1.000 - - - - - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
71. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
72. snoU13 snoU13 2 1 1.000 - - - - - - - -
73. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
74. si:dkey-270m17.3 si:dkey-270m17.3 1 1 - 1.000 - - - - - - -
75. ak7b ENSDARG00000017023 25 1 1.000 - - - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
76. klc4_1 ENSDARG00000086985 22 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
77. nceh1b nceh1b 22 1 - 1.000 - - - - - - -
78. KLHDC3 ENSDARG00000102772 14 1 - 1.000 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
79. si:ch73-25f10.6 ENSDARG00000091932 1 1 - 1.000 - - - - - - - si:ch73-25f10.6 [Source:ZFIN;Acc:ZDB-GENE-100922-192]
80. lrrc34 ENSDARG00000062235 23 1 - 1.000 - - - - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
81. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
82. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
83. erap2 ENSDARG00000098618 16 1 - - - - - 1.000 - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
84. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
85. col17a1b ENSDARG00000079011 143 1 1.000 - - - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
86. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 1.000 - - - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
87. si:ch211-196c10.11 si:ch211-196c10.11 2 1 1.000 - - - - - - - -
88. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
89. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
90. si:dkey-179a6.2 si:dkey-179a6.2 1 1 1.000 - - - - - - - -
91. si:ch73-44m9.2 ENSDARG00000094821 101 1 - 1.000 - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
92. pcdh2g12 5 1 - 1.000 - - - - - - - protocadherin 2 gamma 12
93. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1 - 1.000 - - - - - - -
94. efhb ENSDARG00000069703 9 1 - 1.000 - - - - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
95. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 1.000 - - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
96. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
97. LINS LINS 42 1 - 1.000 - - - - - - -
98. nrp2a ENSDARG00000096546 2 1 - 1.000 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
99. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
100. zgc:113142 ENSDARG00000038969 74 1 1.000 - - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]

There are 750 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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