Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdh4_1

Gene Name Gene ID Reads Annotation
cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]










Genes with expression patterns similar to cdh4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 7 1.000 1.000 1.000 1.000 1.000 1.000 - - 1.000 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
2. dnaaf2 ENSDARG00000103132 24 2 1.000 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
3. ttr ENSDARG00000037191 11 1.969 1.000 - - 0.969 - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
4. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.928 1.000 0.928 - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
5. GRID1 GRID1 51 1.917 1.000 0.917 - - - - - - -
6. PAMR1 ENSDARG00000093480 40 1.914 1.000 0.914 - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
7. iqcc ENSDARG00000092483 65 1.823 0.917 0.906 - - - - - - - IQ motif containing C [Source:ZFIN;Acc:ZDB-GENE-090313-325]
8. si:ch211-141e20.5 si:ch211-141e20.5 7 1.802 - 1.000 - 0.802 - - - - -
9. bon bon 20 1.778 1.000 - - - 0.778 - - - -
10. blnk ENSDARG00000042722 56 1.761 - 1.000 - - - 0.761 - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
11. s100b ENSDARG00000057598 41 1.754 0.826 0.928 - - - - - - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
12. spi1b ENSDARG00000000767 88 1.73 - 1.000 - 0.730 - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
13. d2hgdh ENSDARG00000060210 362 1.73 0.883 0.847 - - - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
14. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1.719 - 1.000 - - 0.719 - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
15. si:dkey-111e8.5 ENSDARG00000093960 28 1.719 1.000 - - - 0.719 - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
16. CR936465.1 CR936465.1 7 1.713 - - - 0.969 0.744 - - - -
17. CU571315.2 ENSDARG00000101956 15 1.708 - 1.000 - - - 0.708 - - -
18. CU469532.1 CU469532.1 31 1.708 - 1.000 - - - 0.708 - - -
19. polr2b ENSDARG00000098783 90 1.704 - 1.000 - - - - - - 0.704 polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
20. CR376787.3 CR376787.3 11 1.7 - - - 0.968 - - - - 0.732
21. si:ch211-15j21.2 si:ch211-15j21.2 13 1.638 - 0.906 - - - - - - 0.732
22. BRSK2 BRSK2 66 1.608 0.840 0.768 - - - - - - -
23. si:dkey-209n16.2 ENSDARG00000095914 27 1.602 - 0.858 - 0.744 - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
24. BX005472.1 BX005472.1 2 1.558 - - - - 0.850 0.708 - - -
25. TRIM14_10 TRIM14_10 9 1.553 - - 0.701 0.852 - - - - -
26. tsnax ENSDARG00000115282 99 1.504 0.702 - - - - 0.802 - - - translin-associated factor X [Source:ZFIN;Acc:ZDB-GENE-050913-80]
27. MPP3 MPP3 13 1.471 - - 0.763 - - 0.708 - - -
28. STK31 ENSDARG00000056339 37 1.433 0.725 - - - - 0.708 - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
29. CR848836.4 CR848836.4 4 1 - 1.000 - - - - - - -
30. glipr1b ENSDARG00000030078 73 1 1.000 - - - - - - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
31. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
32. si:dkey-270m17.3 si:dkey-270m17.3 1 1 - 1.000 - - - - - - -
33. CCDC106_1 CCDC106_1 1 1 1.000 - - - - - - - -
34. C5HXorf57 C5HXorf57 4 1 1.000 - - - - - - - -
35. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
36. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
37. doc2d ENSDARG00000079962 76 1 1.000 - - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
38. BX539307.1 ENSDARG00000071588 2 1 - 1.000 - - - - - - -
39. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
40. CR790388.1_1 ENSDARG00000078922 1 1 1.000 - - - - - - - -
41. CABZ01086354.1 CABZ01086354.1 22 1 - 1.000 - - - - - - -
42. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
43. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
44. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
45. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
46. CABZ01033130.1 CABZ01033130.1 5 1 1.000 - - - - - - - -
47. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
48. gbp3 ENSDARG00000003244 90 1 1.000 - - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
49. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
50. col17a1a ENSDARG00000069415 52 1 1.000 - - - - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
51. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
52. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
53. nog2 ENSDARG00000043066 233 1 - 1.000 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
54. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
55. ncf1 ENSDARG00000033735 83 1 - 1.000 - - - - - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
56. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
57. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
58. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
59. CR751224.1 ENSDARG00000106298 8 1 1.000 - - - - - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
60. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
61. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
62. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
63. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
64. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
65. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
66. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
67. si:dkey-187i8.2 ENSDARG00000096624 8 1 1.000 - - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
68. si:ch211-274k16.4 si:ch211-274k16.4 6 1 1.000 - - - - - - - -
69. si:ch73-44m9.2 ENSDARG00000094821 101 1 - 1.000 - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
70. PHF1 ENSDARG00000057439 1 1 - 1.000 - - - - - - - PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
71. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
72. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
73. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
74. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 1 - 1.000 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
75. zgc:113060 zgc:113060 63 1 - - - - - 1.000 - - -
76. si:dkey-102m7.3 ENSDARG00000100366 27 1 - 1.000 - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
77. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 1.000 - - - - - - - -
78. ankrd1b ENSDARG00000076192 204 1 1.000 - - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
79. si:ch73-27e22.5 si:ch73-27e22.5 10 1 1.000 - - - - - - - -
80. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
81. FAT1 FAT1 689 1 1.000 - - - - - - - -
82. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
83. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
84. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
85. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
86. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
87. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
88. FANCA ENSDARG00000098241 39 1 - 1.000 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
89. abca4a ENSDARG00000057169 27 1 1.000 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
90. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 1.000 - - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
91. npy8br ENSDARG00000005780 15 1 - 1.000 - - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
92. hmha1 hmha1 58 1 1.000 - - - - - - - -
93. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 1.000 - - - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
94. CABZ01079251.1 ENSDARG00000100498 38 1 - 1.000 - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
95. angptl1 angptl1 82 1 1.000 - - - - - - - -
96. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
97. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
98. si:dkey-266h18.3 si:dkey-266h18.3 4 1 - 1.000 - - - - - - -
99. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -
100. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - 1.000 - - - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]

There are 750 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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