Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdh23

Gene Name Gene ID Reads Annotation
cdh23 ENSDARG00000007561, ENSDARG00000094454 3 cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]










Genes with expression patterns similar to cdh23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. twsg1b 7 2 1.000 - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
2. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 2 1.000 - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
3. usp53b ENSDARG00000076499 16 1.728 0.728 - - 1.000 - - - - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
4. NWD1 ENSDARG00000076110 3 1 1.000 - - - - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
5. CU570791.1 ENSDARG00000098597 4 1 - - - 1.000 - - - - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
6. or115-1 ENSDARG00000018521 1 1 - - - 1.000 - - - - - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
7. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
8. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - - - 1.000 - - - - -
9. egln3 ENSDARG00000032553 280 1 1.000 - - - - - - - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
10. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
11. spp1 ENSDARG00000044276 34 1 1.000 - - - - - - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
12. ccbe1 ENSDARG00000086158 0 1 - - - 1.000 - - - - - collagen and calcium binding EGF domains 1 [Source:ZFIN;Acc:ZDB-GENE-090506-7]
13. BX572077.3 BX572077.3 20 1 - - - 1.000 - - - - -
14. armc2 ENSDARG00000022660 3 1 - - - 1.000 - - - - - armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
15. CR847571.1 ENSDARG00000069362 4 1 1.000 - - - - - - - - uncharacterized LOC110437789 [Source:NCBI gene;Acc:110437789]
16. mhc1zaa ENSDARG00000092162 2 1 - - - 1.000 - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
17. nts ENSDARG00000057887 5 1 - - - 1.000 - - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
18. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - 1.000 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
19. si:ch211-145h19.5 ENSDARG00000102884 5 1 1.000 - - - - - - - - si:ch211-145h19.5 [Source:ZFIN;Acc:ZDB-GENE-110914-112]
20. abhd12 ENSDARG00000071004 47 1 1.000 - - - - - - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
21. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - 1.000 - - - - -
22. CU929160.1 ENSDARG00000110056 9 1 1.000 - - - - - - - -
23. CKMT2 CKMT2 10 1 1.000 - - - - - - - -
24. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - 1.000 - - - - -
25. si:dkey-25o1.2 si:dkey-25o1.2 86 1 - - - 1.000 - - - - -
26. adck4 7 1 - - - 1.000 - - - - - aarF domain containing kinase 4, transcript variant X2
27. ACSL6 12 1 1.000 - - - - - - - - acyl-CoA synthetase long-chain family member 6
28. loxhd1b ENSDARG00000074638 6 1 - - - 1.000 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
29. gltpb ENSDARG00000077962 5 1 - - - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
30. zgc:153116 ENSDARG00000077205 7 1 - - - 1.000 - - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
31. si:busm1-180g5.7 si:busm1-180g5.7 15 1 1.000 - - - - - - - -
32. tbx4 ENSDARG00000030058, ENSDARG00000113067 5 1 - - - 1.000 - - - - - T-box 4 [Source:ZFIN;Acc:ZDB-GENE-991124-5]
33. CR339051.1 CR339051.1 9 1 1.000 - - - - - - - -
34. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - 1.000 - - - - - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
35. ntrk3a ENSDARG00000077228 12 1 - - - 1.000 - - - - - neurotrophic tyrosine kinase, receptor, type 3a [Source:ZFIN;Acc:ZDB-GENE-010126-3]
36. si:ch211-106h4.12 ENSDARG00000092920 6 1 - - - 1.000 - - - - - si:ch211-106h4.12 [Source:ZFIN;Acc:ZDB-GENE-070705-12]
37. tusc3 ENSDARG00000078854 4 1 - - - 1.000 - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
38. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -
39. si:dkey-14o1.14 si:dkey-14o1.14 142 1 1.000 - - - - - - - -
40. KYNU ENSDARG00000099546 55 1 1.000 - - - - - - - - kynureninase [Source:ZFIN;Acc:ZDB-GENE-120215-204]
41. scarb2 scarb2 0 1 - - - 1.000 - - - - -
42. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
43. cd4 cd4 4 1 - - - 1.000 - - - - -
44. zak ENSDARG00000006978, ENSDARG00000044615 80 1 1.000 - - - - - - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
45. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
46. zgc:136254 ENSDARG00000068465 27 1 1.000 - - - - - - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
47. SNORD35_1 SNORD35_1 0 1 - - - 1.000 - - - - -
48. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - 1.000 - - - - -
49. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - - - 1.000 - - - - -
50. csrp1b ENSDARG00000030980 2 1 - - - 1.000 - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
51. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - 1.000 - - - - -
52. cog6 ENSDARG00000103149 39 1 - - - 1.000 - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
53. CU694952.2 CU694952.2 3 1 - - - 1.000 - - - - -
54. mtmr10 ENSDARG00000010601 37 1 1.000 - - - - - - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
55. SLC22A23_2 SLC22A23_2 0 1 - - - 1.000 - - - - -
56. plscr3a ENSDARG00000093078 7 1 1.000 - - - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
57. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - - 1.000 - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
58. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
59. PLCG2 ENSDARG00000068763 11 1 - - - 1.000 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
60. si:busm1-71b9.3 11 1 1.000 - - - - - - - - si:busm1-71b9.3, transcript variant X4
61. ARAP1 3 1 1.000 - - - - - - - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
62. LRCH4 ENSDARG00000068258 22 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
63. pla2g4a pla2g4a 7 1 1.000 - - - - - - - -
64. mn1a ENSDARG00000076529 4 1 1.000 - - - - - - - - meningioma 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4968]
65. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 1.000 - - - - - - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
66. myo5b_1 ENSDARG00000062003 6 1 1.000 - - - - - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
67. th2 ENSDARG00000038384 1 1 - - - 1.000 - - - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
68. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - 1.000 - - - - -
69. neurod2 ENSDARG00000016854 6 1 - - - 1.000 - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
70. ZNF337_11 ZNF337_11 11 1 - - - 1.000 - - - - -
71. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
72. BRSK2_2 BRSK2_2 3 1 - - - 1.000 - - - - -
73. si:ch211-149b19.2 ENSDARG00000088882 28 1 1.000 - - - - - - - - si:ch211-149b19.2 [Source:ZFIN;Acc:ZDB-GENE-110411-60]
74. gper gper 4 1 - - - 1.000 - - - - -
75. CUZD1_2 CUZD1_2 1 1 - - - 1.000 - - - - -
76. GRIK2 ENSDARG00000113771 3 1 - - - 1.000 - - - - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
77. wu:fb63c12 26 1 1.000 - - - - - - - - wu:fb63c12
78. rcv1 rcv1 77 1 1.000 - - - - - - - -
79. AL929192.2 AL929192.2 0 1 - - - 1.000 - - - - -
80. gpr19 ENSDARG00000102226 17 1 - - - 1.000 - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
81. si:ch211-260m19.8 si:ch211-260m19.8 33 1 1.000 - - - - - - - -
82. DOK2 ENSDARG00000075818 8 1 1.000 - - - - - - - - docking protein 2 [Source:ZFIN;Acc:ZDB-GENE-080721-4]
83. PEG3_31 PEG3_31 6 1 - - - 1.000 - - - - -
84. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - 1.000 - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
85. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
86. si:ch211-262n1.5 12 1 - - - 1.000 - - - - - si:ch211-262n1.5
87. blnk ENSDARG00000042722 56 1 1.000 - - - - - - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
88. RNH1 ENSDARG00000086631 0 1 - - - 1.000 - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
89. ppp4r1 ENSDARG00000101316 1 1 - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
90. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - 1.000 - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
91. itga2b ENSDARG00000018687 0 1 - - - 1.000 - - - - - integrin, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-051031-1]
92. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
93. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - 1.000 - - - - -
94. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - - 1.000 - - - - -
95. ZACN ZACN 502 1 1.000 - - - - - - - -
96. si:rp71-26b20.1 si:rp71-26b20.1 11 1 1.000 - - - - - - - -
97. si:ch73-266f23.3 ENSDARG00000096120 1 1 - - - 1.000 - - - - - si:ch73-266f23.3 [Source:ZFIN;Acc:ZDB-GENE-110914-182]
98. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - 1.000 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
99. SLC16A7 ENSDARG00000098258 4 1 - - - 1.000 - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
100. nudt4b ENSDARG00000045878 10 1 1.000 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]

There are 296 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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