Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdh23

Gene Name Gene ID Reads Annotation
cdh23 ENSDARG00000007561, ENSDARG00000094454 3 cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]










Genes with expression patterns similar to cdh23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. twsg1b 7 2 1.000 - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
2. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 2 1.000 - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
3. usp53b ENSDARG00000076499 16 1.728 0.728 - - 1.000 - - - - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
4. si:ch211-282j17.1 ENSDARG00000043769 2 1 1.000 - - - - - - - - si:ch211-282j17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-285]
5. nudt4b ENSDARG00000045878 10 1 1.000 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
6. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - 1.000 - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
7. gbgt1l1 ENSDARG00000025275 21 1 1.000 - - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
8. tusc3 ENSDARG00000078854 4 1 - - - 1.000 - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
9. si:ch73-266f23.3 ENSDARG00000096120 1 1 - - - 1.000 - - - - - si:ch73-266f23.3 [Source:ZFIN;Acc:ZDB-GENE-110914-182]
10. or115-1 ENSDARG00000018521 1 1 - - - 1.000 - - - - - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
11. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
12. abhd12 ENSDARG00000071004 47 1 1.000 - - - - - - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
13. CR339051.1 CR339051.1 9 1 1.000 - - - - - - - -
14. calhm3 ENSDARG00000079602 4 1 - - - 1.000 - - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
15. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - 1.000 - - - - -
16. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - 1.000 - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
17. sorl1 ENSDARG00000013892 13 1 - - - 1.000 - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
18. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - 1.000 - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
19. SLC16A7 ENSDARG00000098258 4 1 - - - 1.000 - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
20. BX572077.3 BX572077.3 20 1 - - - 1.000 - - - - -
21. csrp1b ENSDARG00000030980 2 1 - - - 1.000 - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
22. zgc:173713 17 1 - - - 1.000 - - - - - zgc:173713, transcript variant X2
23. CR848025.1 ENSDARG00000100501 35 1 - - - 1.000 - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
24. si:ch211-213i16.3 2 1 1.000 - - - - - - - - si:ch211-213i16.3, transcript variant X1
25. ppp4r1 ENSDARG00000101316 1 1 - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
26. si:ch211-262n1.5 12 1 - - - 1.000 - - - - - si:ch211-262n1.5
27. CU183952.2 CU183952.2 6 1 - - - 1.000 - - - - -
28. si:ch211-122l24.4_1 si:ch211-122l24.4_1 53 1 1.000 - - - - - - - -
29. xrra1 ENSDARG00000089578 18 1 - - - 1.000 - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
30. CU694952.2 CU694952.2 3 1 - - - 1.000 - - - - -
31. th2 ENSDARG00000038384 1 1 - - - 1.000 - - - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
32. FBXO16 ENSDARG00000033949 10 1 1.000 - - - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
33. si:rp71-26b20.1 si:rp71-26b20.1 11 1 1.000 - - - - - - - -
34. si:dkey-14o1.14 si:dkey-14o1.14 142 1 1.000 - - - - - - - -
35. IMPG2 IMPG2 1 1 - - - 1.000 - - - - -
36. rtn4rl2b ENSDARG00000037495 11 1 1.000 - - - - - - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
37. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - 1.000 - - - - - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
38. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - 1.000 - - - - -
39. AL929192.2 AL929192.2 0 1 - - - 1.000 - - - - -
40. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - 1.000 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
41. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
42. gper gper 4 1 - - - 1.000 - - - - -
43. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - - - 1.000 - - - - -
44. pmch ENSDARG00000073959 1 1 - - - 1.000 - - - - - pro-melanin-concentrating hormone [Source:ZFIN;Acc:ZDB-GENE-041210-150]
45. LRCH4 ENSDARG00000068258 22 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
46. myo5b_1 ENSDARG00000062003 6 1 1.000 - - - - - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
47. PLCG2 ENSDARG00000068763 11 1 - - - 1.000 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
48. SNORD35_1 SNORD35_1 0 1 - - - 1.000 - - - - -
49. mn1a ENSDARG00000076529 4 1 1.000 - - - - - - - - meningioma 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4968]
50. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
51. MFAP4 ENSDARG00000090783 8 1 - - - 1.000 - - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
52. gpr19 ENSDARG00000102226 17 1 - - - 1.000 - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
53. BRSK2_2 BRSK2_2 3 1 - - - 1.000 - - - - -
54. ANKRD34C 13 1 1.000 - - - - - - - - ankyrin repeat domain 34C
55. GRIK2 ENSDARG00000113771 3 1 - - - 1.000 - - - - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
56. zgc:153116 ENSDARG00000077205 7 1 - - - 1.000 - - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
57. ZACN ZACN 502 1 1.000 - - - - - - - -
58. chrm2a ENSDARG00000098612 5 1 - - - 1.000 - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
59. adamts18 ENSDARG00000001999 5 1 1.000 - - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:ZFIN;Acc:ZDB-GENE-070815-1]
60. ttc6 ENSDARG00000104125 7 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
61. cd226 ENSDARG00000045391 2 1 1.000 - - - - - - - - CD226 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-1322]
62. ZNF337_11 ZNF337_11 11 1 - - - 1.000 - - - - -
63. wu:fb63c12 26 1 1.000 - - - - - - - - wu:fb63c12
64. tmem117 ENSDARG00000088356 0 1 - - - 1.000 - - - - - transmembrane protein 117 [Source:ZFIN;Acc:ZDB-GENE-040426-2809]
65. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - - 1.000 - - - - -
66. loxhd1b ENSDARG00000074638 6 1 - - - 1.000 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
67. ARAP1 3 1 1.000 - - - - - - - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
68. CR847571.1 ENSDARG00000069362 4 1 1.000 - - - - - - - - uncharacterized LOC110437789 [Source:NCBI gene;Acc:110437789]
69. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - 1.000 - - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
70. RNH1 ENSDARG00000086631 0 1 - - - 1.000 - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
71. si:ch73-77n15.1 si:ch73-77n15.1 2 1 1.000 - - - - - - - -
72. si:dkey-25o1.2 si:dkey-25o1.2 86 1 - - - 1.000 - - - - -
73. egln3 ENSDARG00000032553 280 1 1.000 - - - - - - - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
74. gltpb ENSDARG00000077962 5 1 - - - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
75. C7H19orf12 C7H19orf12 7 1 1.000 - - - - - - - -
76. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
77. EXT1_1 EXT1_1 3 1 - - - 1.000 - - - - -
78. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
79. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 1.000 - - - - - - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
80. si:dkey-233h12.3 si:dkey-233h12.3 4 1 1.000 - - - - - - - -
81. pla2g4a pla2g4a 7 1 1.000 - - - - - - - -
82. dio2 ENSDARG00000094857 17 1 - - - 1.000 - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
83. diaph2 ENSDARG00000076060 26 1 - - - 1.000 - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
84. BX548047.2 ENSDARG00000115500 17 1 1.000 - - - - - - - -
85. ftr09 ENSDARG00000095345 0 1 - - - 1.000 - - - - - finTRIM family, member 9 [Source:ZFIN;Acc:ZDB-GENE-070912-223]
86. HIST1H4H HIST1H4H 26 1 - - - 1.000 - - - - -
87. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - 1.000 - - - - -
88. zak ENSDARG00000006978, ENSDARG00000044615 80 1 1.000 - - - - - - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
89. slc2a5 ENSDARG00000077875 5 1 1.000 - - - - - - - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
90. mhc1zaa ENSDARG00000092162 2 1 - - - 1.000 - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
91. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - 1.000 - - - - -
92. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
93. KYNU ENSDARG00000099546 55 1 1.000 - - - - - - - - kynureninase [Source:ZFIN;Acc:ZDB-GENE-120215-204]
94. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 1 - - - 1.000 - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
95. gpr55a ENSDARG00000043447 12 1 1.000 - - - - - - - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
96. ampd2 ampd2 6 1 - - - 1.000 - - - - -
97. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - - - 1.000 - - - - -
98. zgc:136254 ENSDARG00000068465 27 1 1.000 - - - - - - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
99. ca10b ENSDARG00000009568 8 1 - - - 1.000 - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
100. OSCP1 ENSDARG00000101888 59 1 1.000 - - - - - - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]

There are 296 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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