Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdh23

Gene Name Gene ID Reads Annotation
cdh23 ENSDARG00000007561, ENSDARG00000094454 3 cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]










Genes with expression patterns similar to cdh23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 2 1.000 - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
2. twsg1b 7 2 1.000 - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
3. usp53b ENSDARG00000076499 16 1.728 0.728 - - 1.000 - - - - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
4. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
5. SNORD35_1 SNORD35_1 0 1 - - - 1.000 - - - - -
6. si:dkey-183p4.10 ENSDARG00000077907 5 1 - - - 1.000 - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
7. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - 1.000 - - - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
8. abhd12 ENSDARG00000071004 47 1 1.000 - - - - - - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
9. or115-1 ENSDARG00000018521 1 1 - - - 1.000 - - - - - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
10. DOK2 ENSDARG00000075818 8 1 1.000 - - - - - - - - docking protein 2 [Source:ZFIN;Acc:ZDB-GENE-080721-4]
11. ampd2 ampd2 6 1 - - - 1.000 - - - - -
12. nfixa ENSDARG00000043226 14 1 - - - 1.000 - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
13. ZNF337_11 ZNF337_11 11 1 - - - 1.000 - - - - -
14. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
15. chrm2a ENSDARG00000098612 5 1 - - - 1.000 - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
16. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
17. si:ch73-266f23.3 ENSDARG00000096120 1 1 - - - 1.000 - - - - - si:ch73-266f23.3 [Source:ZFIN;Acc:ZDB-GENE-110914-182]
18. zgc:173713 17 1 - - - 1.000 - - - - - zgc:173713, transcript variant X2
19. U5 U5 0 1 - - - 1.000 - - - - -
20. AP1S3 AP1S3 8 1 1.000 - - - - - - - -
21. si:dkey-13d5.1 si:dkey-13d5.1 3 1 1.000 - - - - - - - -
22. CABZ01025394.1 CABZ01025394.1 1 1 - - - 1.000 - - - - -
23. mir199-2 mir199-2 38 1 1.000 - - - - - - - -
24. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - 1.000 - - - - -
25. SLC22A23_2 SLC22A23_2 0 1 - - - 1.000 - - - - -
26. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - 1.000 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
27. KCNJ15 ENSDARG00000058988 18 1 1.000 - - - - - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
28. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - - - 1.000 - - - - -
29. armc2 ENSDARG00000022660 3 1 - - - 1.000 - - - - - armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
30. EHD2 EHD2 23 1 1.000 - - - - - - - -
31. si:ch211-262n1.5 12 1 - - - 1.000 - - - - - si:ch211-262n1.5
32. CR339051.1 CR339051.1 9 1 1.000 - - - - - - - -
33. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
34. ARAP1 3 1 1.000 - - - - - - - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
35. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
36. DHPS ENSDARG00000003270 85 1 1.000 - - - - - - - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
37. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - - 1.000 - - - - -
38. mhc1zaa ENSDARG00000092162 2 1 - - - 1.000 - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
39. ydjc ENSDARG00000062655 5 1 - - - 1.000 - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
40. ppp4r1 ENSDARG00000101316 1 1 - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
41. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - 1.000 - - - - -
42. ACSL6 12 1 1.000 - - - - - - - - acyl-CoA synthetase long-chain family member 6
43. BRSK2_2 BRSK2_2 3 1 - - - 1.000 - - - - -
44. tmem117 ENSDARG00000088356 0 1 - - - 1.000 - - - - - transmembrane protein 117 [Source:ZFIN;Acc:ZDB-GENE-040426-2809]
45. U6_8 U6_8 6 1 1.000 - - - - - - - -
46. CR769782.1 CR769782.1 8 1 - - - 1.000 - - - - -
47. diaph2 ENSDARG00000076060 26 1 - - - 1.000 - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
48. gltpb ENSDARG00000077962 5 1 - - - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
49. si:dkey-148d16.5 ENSDARG00000096782 0 1 - - - 1.000 - - - - - si:dkey-148d16.5 [Source:ZFIN;Acc:ZDB-GENE-130603-77]
50. spp1 ENSDARG00000044276 34 1 1.000 - - - - - - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
51. ascl1b ENSDARG00000009702, ENSDARG00000101628 1 1 - - - 1.000 - - - - - achaete-scute family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-980526-174]
52. RNH1 ENSDARG00000086631 0 1 - - - 1.000 - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
53. PLCG2 ENSDARG00000068763 11 1 - - - 1.000 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
54. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
55. ZACN ZACN 502 1 1.000 - - - - - - - -
56. nts ENSDARG00000057887 5 1 - - - 1.000 - - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
57. OSCP1 ENSDARG00000101888 59 1 1.000 - - - - - - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
58. cog6 ENSDARG00000103149 39 1 - - - 1.000 - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
59. CU183952.2 CU183952.2 6 1 - - - 1.000 - - - - -
60. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - 1.000 - - - - -
61. foxe1 ENSDARG00000079266 6 1 1.000 - - - - - - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
62. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - 1.000 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
63. si:rp71-26b20.1 si:rp71-26b20.1 11 1 1.000 - - - - - - - -
64. ftr09 ENSDARG00000095345 0 1 - - - 1.000 - - - - - finTRIM family, member 9 [Source:ZFIN;Acc:ZDB-GENE-070912-223]
65. si:dkey-25o1.2 si:dkey-25o1.2 86 1 - - - 1.000 - - - - -
66. adck4 7 1 - - - 1.000 - - - - - aarF domain containing kinase 4, transcript variant X2
67. ccbe1 ENSDARG00000086158 0 1 - - - 1.000 - - - - - collagen and calcium binding EGF domains 1 [Source:ZFIN;Acc:ZDB-GENE-090506-7]
68. CR848025.1 ENSDARG00000100501 35 1 - - - 1.000 - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
69. CDKN2B CDKN2B 5 1 1.000 - - - - - - - -
70. rtn4rl2b ENSDARG00000037495 11 1 1.000 - - - - - - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
71. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
72. egln3 ENSDARG00000032553 280 1 1.000 - - - - - - - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
73. MFAP4 ENSDARG00000090783 8 1 - - - 1.000 - - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
74. HIST1H4H HIST1H4H 26 1 - - - 1.000 - - - - -
75. si:ch211-202h22.7 ENSDARG00000073912 18 1 1.000 - - - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
76. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - 1.000 - - - - - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
77. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 1.000 - - - - - - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
78. cd4 cd4 4 1 - - - 1.000 - - - - -
79. CR354426.1 CR354426.1 25 1 1.000 - - - - - - - -
80. CDC42EP1 CDC42EP1 50 1 1.000 - - - - - - - -
81. si:ch211-213i16.3 2 1 1.000 - - - - - - - - si:ch211-213i16.3, transcript variant X1
82. itga2b ENSDARG00000018687 0 1 - - - 1.000 - - - - - integrin, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-051031-1]
83. zgc:193682 zgc:193682 15 1 1.000 - - - - - - - -
84. pla2g4a pla2g4a 7 1 1.000 - - - - - - - -
85. tusc3 ENSDARG00000078854 4 1 - - - 1.000 - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
86. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -
87. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - 1.000 - - - - -
88. wu:fb63c12 26 1 1.000 - - - - - - - - wu:fb63c12
89. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - 1.000 - - - - -
90. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - - - 1.000 - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
91. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
92. loxhd1b ENSDARG00000074638 6 1 - - - 1.000 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
93. C7H19orf12 C7H19orf12 7 1 1.000 - - - - - - - -
94. si:ch211-229l10.10 si:ch211-229l10.10 8 1 - - - 1.000 - - - - -
95. btg4 ENSDARG00000035171, ENSDARG00000109355 6 1 1.000 - - - - - - - - B-cell translocation gene 4 [Source:ZFIN;Acc:ZDB-GENE-031008-1]
96. ANKRD34C 13 1 1.000 - - - - - - - - ankyrin repeat domain 34C
97. CR847571.1 ENSDARG00000069362 4 1 1.000 - - - - - - - - uncharacterized LOC110437789 [Source:NCBI gene;Acc:110437789]
98. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - 1.000 - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
99. ntrk3a ENSDARG00000077228 12 1 - - - 1.000 - - - - - neurotrophic tyrosine kinase, receptor, type 3a [Source:ZFIN;Acc:ZDB-GENE-010126-3]
100. sorl1 ENSDARG00000013892 13 1 - - - 1.000 - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]

There are 296 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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