Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdh17

Gene Name Gene ID Reads Annotation
cdh17 ENSDARG00000005112 3816 cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]










Genes with expression patterns similar to cdh17

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh17 ENSDARG00000005112 3816 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
2. ndrg1a ENSDARG00000032849 2406 4.547 - 0.704 - 0.708 0.707 0.706 0.867 - 0.855 N-myc downstream regulated 1a [Source:ZFIN;Acc:ZDB-GENE-030826-34]
3. AL928724.1 ENSDARG00000097525 421 4.224 0.865 0.909 - - - 0.838 0.796 - 0.816
4. atp1a1a.4 ENSDARG00000001870 1864 4.128 0.954 0.758 - - 0.709 0.960 0.747 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
5. si:ch211-69i14.10 si:ch211-69i14.10 1939 3.574 0.931 - - - - 0.960 0.951 - 0.732
6. CU596012.2 CU596012.2 1046 3.514 0.917 0.870 - - - 0.913 0.814 - -
7. clcnk ENSDARG00000022560 355 3.503 0.853 0.936 - - - 0.921 0.793 - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
8. si:ch211-207j7.2 ENSDARG00000090793 316 3.46 0.791 0.928 - - - 0.966 0.775 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
9. slc12a3 ENSDARG00000013855 990 3.409 0.826 0.918 - - - 0.919 0.746 - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
10. mal 906 3.221 0.884 0.853 - - - 0.770 0.714 - - mal, T-cell differentiation protein
11. ccl-c5a ccl-c5a 217 3.137 0.780 0.706 - - - 0.896 0.755 - -
12. AL954146.5 AL954146.5 202 3.104 0.745 0.808 - - - 0.799 0.752 - -
13. zgc:158222 ENSDARG00000051873, ENSDARG00000112532 642 3.09 0.777 0.817 - - - 0.789 - - 0.707 zgc:158222 [Source:ZFIN;Acc:ZDB-GENE-070112-1522]
14. bin2a ENSDARG00000003219 1369 2.701 0.892 0.845 - - - 0.964 - - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
15. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 2.685 0.956 0.781 - - - 0.948 - - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
16. atp1b1a ENSDARG00000013144 19744 2.667 0.954 - - - - 0.900 0.813 - - ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
17. ponzr1 ENSDARG00000090444 540 2.61 0.853 0.889 - - - 0.868 - - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
18. BX571714.1 ENSDARG00000114727 243 2.399 - 0.783 - - - 0.825 0.791 - - SET domain containing 1A [Source:NCBI gene;Acc:556535]
19. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 2.323 - 0.823 - - - 0.718 0.782 - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
20. si:dkey-39a18.1 ENSDARG00000045669 599 2.268 0.739 - - - - 0.734 0.795 - - si:dkey-39a18.1 [Source:ZFIN;Acc:ZDB-GENE-041210-127]
21. atp1a1a.3 ENSDARG00000039131 3267 2.241 - 0.740 - - - 0.786 0.715 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-001212-3]
22. tnfaip8l3 ENSDARG00000088709 345 2.233 0.736 0.757 - - - - 0.740 - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
23. esrrb ENSDARG00000100847 636 1.759 0.865 - - - - 0.894 - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
24. tmx2b ENSDARG00000007786 3151 1.744 0.782 0.962 - - - - - - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
25. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 1.724 0.918 - - - - - 0.806 - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
26. emx1 ENSDARG00000039569 787 1.687 0.844 0.843 - - - - - - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
27. mb ENSDARG00000031952 351 1.644 0.725 - - - - 0.919 - - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
28. CR388015.1 CR388015.1 311 1.635 0.873 - - - - 0.762 - - -
29. CR559945.3 CR559945.3 1029 1.627 - 0.826 - - - 0.801 - - -
30. zgc:194930 ENSDARG00000079584 326 1.627 0.875 - - - - 0.752 - - - zgc:194930 [Source:ZFIN;Acc:ZDB-GENE-081022-166]
31. elovl1b ENSDARG00000103735 2783 1.624 - 0.822 - - - - 0.802 - - ELOVL fatty acid elongase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2755]
32. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 1.605 - 0.788 - - - 0.817 - - - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
33. STYK1_1 STYK1_1 34 1.598 0.838 - - - - - 0.760 - -
34. sod2 ENSDARG00000042644 1382 1.593 0.703 0.890 - - - - - - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
35. tfap2b ENSDARG00000012667 746 1.591 0.716 0.875 - - - - - - - transcription factor AP-2 beta [Source:ZFIN;Acc:ZDB-GENE-050417-394]
36. hook1 ENSDARG00000042946 452 1.591 0.872 0.719 - - - - - - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]
37. chd 56 1.587 - - - - - 0.886 0.701 - - chordin
38. ankmy1 ENSDARG00000062702 52 1.585 0.810 - - - - 0.775 - - - ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
39. hvcn1 ENSDARG00000040338 571 1.577 - 0.723 - - - 0.854 - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
40. capsla ENSDARG00000103521 277 1.57 0.728 0.842 - - - - - - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
41. cxcl-c5c cxcl-c5c 182 1.562 - 0.788 - - - - 0.774 - -
42. SLC3A2 SLC3A2 135 1.558 - - - - - 0.851 0.707 - -
43. alox5 alox5 406 1.557 - 0.739 - - - 0.818 - - -
44. pax8 ENSDARG00000015879 368 1.554 - - - - - 0.765 0.789 - - paired box 8 [Source:ZFIN;Acc:ZDB-GENE-001030-3]
45. mir30c 904 1.549 - 0.766 - - - 0.783 - - - microRNA 30c
46. kcnj1a.1 ENSDARG00000091232 110 1.547 0.707 - - - - 0.840 - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
47. dytn ENSDARG00000071025 38 1.537 - 0.761 - - - 0.776 - - - dystrotelin [Source:ZFIN;Acc:ZDB-GENE-070124-2]
48. cpne2 ENSDARG00000007753 206 1.536 0.790 - - - - - 0.746 - - copine II [Source:ZFIN;Acc:ZDB-GENE-030131-7896]
49. ppargc1a ENSDARG00000067829 772 1.534 0.726 - - - - 0.808 - - - peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:ZFIN;Acc:ZDB-GENE-080505-1]
50. ERICH2 ENSDARG00000107534 160 1.527 - - - - - 0.790 0.737 - - glutamate-rich 2 [Source:ZFIN;Acc:ZDB-GENE-131231-2]
51. map3k19 ENSDARG00000094272 59 1.526 - 0.778 - - - - 0.748 - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
52. apom ENSDARG00000076838 4732 1.525 - - - - 0.810 - - 0.715 - apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
53. ctsh ENSDARG00000041108 2873 1.521 - - - 0.742 0.779 - - - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
54. PIK3R6 PIK3R6 149 1.518 0.779 0.739 - - - - - - -
55. apoa1b ENSDARG00000101324 336817 1.515 - - - - 0.767 - - 0.748 - apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
56. slc12a1 ENSDARG00000098096 526 1.513 - - - - - 0.798 0.715 - - solute carrier family 12 (sodium/potassium/chloride transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080130-3]
57. hspd1 ENSDARG00000056160 13690 1.512 - - - - - 0.761 0.751 - - heat shock 60 protein 1 [Source:ZFIN;Acc:ZDB-GENE-021206-1]
58. c5 ENSDARG00000021004 3536 1.509 - - - - 0.728 - - 0.781 - complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
59. pla2g12b ENSDARG00000015662 27239 1.505 - - - - 0.792 - - 0.713 - phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
60. mat1a ENSDARG00000039605, ENSDARG00000115975 15561 1.504 - - - 0.742 0.762 - - - - methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
61. bsnd ENSDARG00000086265 178 1.497 0.783 - - - - 0.714 - - - barttin CLCNK-type chloride channel accessory beta subunit [Source:ZFIN;Acc:ZDB-GENE-070705-548]
62. SSTR5 ENSDARG00000101655 351 1.495 - 0.761 - - - 0.734 - - - somatostatin receptor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2502]
63. cldnh ENSDARG00000069503 2410 1.494 0.771 - - - 0.723 - - - - claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
64. blvra ENSDARG00000059857 270 1.487 0.714 0.773 - - - - - - - biliverdin reductase A [Source:ZFIN;Acc:ZDB-GENE-060929-312]
65. elf3 ENSDARG00000077982 211 1.477 - 0.706 - - - 0.771 - - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
66. etnk1 ENSDARG00000019420 2166 1.473 0.722 - - - - - 0.751 - - ethanolamine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-21]
67. magixa ENSDARG00000025108 561 1.471 0.771 - - - - 0.700 - - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
68. sgk1 ENSDARG00000025522, ENSDARG00000115600 1650 1.469 - - - - - 0.708 0.761 - - serum/glucocorticoid regulated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2860]
69. tnfrsf21 ENSDARG00000001807 239 1.459 0.729 0.730 - - - - - - - tumor necrosis factor receptor superfamily, member 21 [Source:ZFIN;Acc:ZDB-GENE-030131-5971]
70. GCNT7 ENSDARG00000040608 91 1.457 0.720 - - - - - 0.737 - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
71. apoc2 ENSDARG00000092155 38149 1.453 - - - - 0.738 - - 0.715 - apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
72. cldnc ENSDARG00000015955 3196 1.452 - - 0.734 0.718 - - - - - claudin c [Source:ZFIN;Acc:ZDB-GENE-010328-3]
73. apoa2 ENSDARG00000015866 297380 1.449 - - - - 0.743 - - 0.706 - apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
74. APOB APOB 33858 1.441 - - - - 0.736 - - 0.705 -
75. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.429 0.729 0.700 - - - - - - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
76. RBM47 ENSDARG00000061985 2498 1.428 0.715 - 0.713 - - - - - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
77. glula ENSDARG00000099776 14156 1.426 - - - 0.717 0.709 - - - - glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
78. mavs ENSDARG00000069733 311 1.424 0.719 - - - - - - - 0.705 mitochondrial antiviral signaling protein [Source:ZFIN;Acc:ZDB-GENE-070112-1402]
79. vtnb ENSDARG00000053831 2364 1.414 - - - - 0.711 - - 0.703 - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
80. klhl23 ENSDARG00000078475 92 0.942 0.942 - - - - - - - - kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
81. gprc5c ENSDARG00000100862 457 0.927 0.927 - - - - - - - - G protein-coupled receptor, class C, group 5, member C [Source:ZFIN;Acc:ZDB-GENE-070928-27]
82. stc1l ENSDARG00000058476 512 0.926 0.926 - - - - - - - - stanniocalcin 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1521]
83. CABZ01064972.1 ENSDARG00000098966 199 0.917 - - - - - 0.917 - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
84. hoxb6a ENSDARG00000010630 1106 0.914 - 0.914 - - - - - - - homeobox B6a [Source:ZFIN;Acc:ZDB-GENE-990415-106]
85. paqr6 ENSDARG00000041483 795 0.913 - 0.913 - - - - - - - progestin and adipoQ receptor family member VI [Source:ZFIN;Acc:ZDB-GENE-090714-1]
86. aspdh ENSDARG00000038297 39 0.91 - - - - - 0.910 - - - aspartate dehydrogenase domain containing [Source:ZFIN;Acc:ZDB-GENE-040912-102]
87. USP2 USP2 157 0.906 - 0.906 - - - - - - -
88. GPR141_1 GPR141_1 33 0.904 - - - - - 0.904 - - -
89. wu:fb68b01 wu:fb68b01 42 0.895 - - - - - 0.895 - - -
90. polr1b ENSDARG00000077469, ENSDARG00000115880 313 0.895 - - - - - 0.895 - - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
91. SLC24A2 ENSDARG00000042988 242 0.895 - - - - - 0.895 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
92. foxp1b ENSDARG00000014181 2594 0.891 - 0.891 - - - - - - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
93. vsg1 1870 0.884 - 0.884 - - - - - - - vessel-specific 1
94. mycbpap ENSDARG00000069194 32 0.883 - - - - - 0.883 - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
95. pnkd ENSDARG00000071032 447 0.879 - 0.879 - - - - - - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
96. glis3 ENSDARG00000069726 59 0.874 - - - - - 0.874 - - - GLIS family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2232]
97. defbl1 ENSDARG00000075161 211 0.87 - - - - - 0.870 - - - defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
98. vil1 ENSDARG00000040466 81 0.87 - - - - - 0.870 - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
99. si:dkey-97i18.5 si:dkey-97i18.5 1362 0.869 - - - - - - - 0.869 -
100. HPCAL1 ENSDARG00000022763 2885 0.869 - 0.869 - - - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]

There are 633 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA