Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdh1

Gene Name Gene ID Reads Annotation
cdh1 ENSDARG00000102750 8654 cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]










Genes with expression patterns similar to cdh1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh1 ENSDARG00000102750 8654 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
2. pdcd6ip ENSDARG00000025269 2522 2.42 - 0.862 - - - 0.857 - - 0.701 programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
3. coro2a ENSDARG00000005210 1479 2.308 - 0.702 - - - - - 0.805 0.801 coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
4. igfbp1a ENSDARG00000099351 1717 1.846 - - - - - - 0.967 0.879 - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
5. cd164 ENSDARG00000013628 21750 1.823 - - - - - 0.846 0.977 - - CD164 molecule, sialomucin [Source:ZFIN;Acc:ZDB-GENE-030131-1598]
6. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.817 - 0.912 - - - - - - 0.905 transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
7. shmt1 ENSDARG00000052816 5463 1.788 - - - - - - 0.984 0.804 - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
8. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 1.77 - - - - - - 0.969 - 0.801 ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
9. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.756 - - - - - 0.776 0.980 - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
10. degs1 ENSDARG00000007347 2481 1.756 - - - - - 0.782 0.974 - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
11. sept9a ENSDARG00000020235 6881 1.747 - - - - - 0.781 0.966 - - septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
12. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 1.746 - 0.770 - - - - 0.976 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
13. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 1.743 - 0.764 - - - - 0.979 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
14. ctdsp1 ENSDARG00000040674 2828 1.732 - - - - - 0.759 0.973 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
15. anxa1c ENSDARG00000104359 23181 1.732 - - - - - - 0.982 - 0.750 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
16. SH3BGRL ENSDARG00000058302 4525 1.728 - 0.751 - - - - 0.977 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
17. gstp1 ENSDARG00000104068 12698 1.727 - 0.936 - - - - - 0.791 - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
18. hrsp12 3981 1.712 - 0.723 - - - - 0.989 - - heat-responsive protein 12, transcript variant 1
19. arf6b ENSDARG00000052928 4585 1.698 - - - - - - 0.981 - 0.717 ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
20. fuca1 fuca1 6176 1.692 - 0.706 - - - - 0.986 - -
21. mtmr14 ENSDARG00000059642 1405 1.679 - - - - - 0.704 0.975 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
22. csrp1a ENSDARG00000006603 5188 1.669 - - - - - - - 0.863 0.806 cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
23. eps8l1 1598 1.668 - 0.781 - - - - - 0.887 - eps8-like1, transcript variant X3
24. cldne ENSDARG00000043128 6960 1.665 - 0.861 - - - - - - 0.804 claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
25. myh9a ENSDARG00000063295 27935 1.652 - 0.859 - - - - - - 0.793 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
26. nr0b2a ENSDARG00000044685 2508 1.651 0.827 0.824 - - - - - - - nuclear receptor subfamily 0, group B, member 2a [Source:ZFIN;Acc:ZDB-GENE-080403-1]
27. mtpn ENSDARG00000104018 4264 1.649 0.827 - - - - - - 0.822 - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
28. dlx3b ENSDARG00000014626 3647 1.636 0.746 - - - - - - - 0.890 distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
29. yy1b ENSDARG00000027978 2669 1.634 - - - - - - - 0.862 0.772 YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
30. myo9b ENSDARG00000077410 1956 1.632 - - - - - 0.745 - 0.887 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
31. arhgdig ENSDARG00000004034 10368 1.63 0.850 0.780 - - - - - - - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
32. st6gal2 st6gal2 1570 1.626 - 0.745 - - - - - 0.881 -
33. arl4ca ENSDARG00000057606 4686 1.624 - 0.907 - 0.717 - - - - - ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
34. cxxc1l cxxc1l 1035 1.621 - - - - - 0.747 - 0.874 -
35. cebpb ENSDARG00000042725 3921 1.618 - 0.749 - - - - - 0.869 - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
36. tfap2c ENSDARG00000040606 4628 1.615 - - - - - - - 0.841 0.774 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
37. acy3.2 ENSDARG00000005525 6441 1.606 - 0.798 - - - - - 0.808 - aspartoacylase (aminocyclase) 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040718-37]
38. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.603 - - - - - 0.820 - - 0.783 RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
39. id2a ENSDARG00000055283 7428 1.602 0.801 - - - - 0.801 - - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
40. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 1.602 - 0.753 - - - - - 0.849 - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
41. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.598 - 0.765 - - - - - 0.833 - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
42. ndrg2 ENSDARG00000011170 11442 1.596 0.786 - - - - - - 0.810 - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
43. si:dkey-56e3.2 ENSDARG00000092551 835 1.594 - - - - - - - 0.885 0.709 si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
44. fam102ab ENSDARG00000016866, ENSDARG00000113063 1080 1.594 - - - - - 0.733 - 0.861 - family with sequence similarity 102, member Ab [Source:ZFIN;Acc:ZDB-GENE-060929-412]
45. SLC25A24 ENSDARG00000008568 2005 1.593 - - - - - 0.743 - 0.850 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
46. m6pr ENSDARG00000018432 1411 1.593 - 0.801 - - - - - - 0.792 mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
47. zgc:153284 ENSDARG00000036876, ENSDARG00000109673 3507 1.591 0.814 0.777 - - - - - - - zgc:153284 [Source:ZFIN;Acc:ZDB-GENE-060825-317]
48. CT573389.2 CT573389.2 1183 1.591 0.814 - - - - - - - 0.777
49. capn2b ENSDARG00000055592 5431 1.59 0.733 - - - - - - 0.857 - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
50. lrrc58a ENSDARG00000076773 1269 1.584 0.750 0.834 - - - - - - - leucine rich repeat containing 58a [Source:ZFIN;Acc:ZDB-GENE-090312-76]
51. gna12a ENSDARG00000025826 1769 1.575 - - - - - 0.787 - - 0.788 guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
52. PVRL4 1691 1.572 - - - - - 0.792 - - 0.780 poliovirus receptor-related 4
53. WIPF2 WIPF2 3171 1.571 - - - - - 0.836 - - 0.735
54. bcar1 ENSDARG00000056525 6563 1.567 - - - - - - - 0.843 0.724 BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
55. arpc1a ENSDARG00000008383 7353 1.565 - 0.716 - - - - - 0.849 - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
56. dhrs3b ENSDARG00000044803 2931 1.55 - - - - - 0.754 - - 0.796 dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
57. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 1.547 0.746 0.801 - - - - - - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
58. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 1.546 - 0.776 - - - - - 0.770 - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
59. itgb1b.1 ENSDARG00000053232 4721 1.542 - 0.816 - - - 0.726 - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
60. ACSL1 ACSL1 240 1.541 0.764 0.777 - - - - - - -
61. trim35-28 ENSDARG00000021021 1380 1.536 - - - - - 0.761 - - 0.775 tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
62. CABZ01088509.1 CABZ01088509.1 1213 1.536 - - - - - 0.758 - - 0.778
63. daam1a ENSDARG00000015059 1460 1.529 - - - - - 0.740 - - 0.789 dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
64. hbegfa ENSDARG00000075121 1865 1.524 - - - - - 0.724 - - 0.800 heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
65. BRK1 ENSDARG00000041974 6430 1.521 - 0.726 - - - 0.795 - - - BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
66. frem1a ENSDARG00000069473 1847 1.517 - - - - - - - 0.793 0.724 Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
67. stxbp2 ENSDARG00000007603 1646 1.513 - 0.738 - - - - - - 0.775 syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
68. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.511 - 0.777 - - - 0.734 - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
69. pdlim1 ENSDARG00000019845 5765 1.511 - - - - - 0.759 - - 0.752 PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
70. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.508 - 0.717 - - - 0.791 - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
71. atp6v1c1a ENSDARG00000023967 4611 1.506 - 0.782 - - - 0.724 - - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
72. nol7 ENSDARG00000075795 1559 1.503 - - - - - 0.726 - - 0.777 nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
73. gna13b ENSDARG00000037924 1963 1.503 - - - - - 0.747 - - 0.756 guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
74. cldnb ENSDARG00000009544 6036 1.495 - 0.753 - - - - - - 0.742 claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
75. slc35c2 ENSDARG00000037517, ENSDARG00000114428 3644 1.494 0.768 - - - - 0.726 - - - solute carrier family 35 (GDP-fucose transporter), member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]
76. cxcr4a ENSDARG00000057633 1829 1.491 - - - - - 0.769 - - 0.722 chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
77. npc1 ENSDARG00000017180 3724 1.491 0.753 - - - - - - 0.738 - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
78. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.49 - 0.720 - - - - - - 0.770 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
79. si:ch211-226m16.2 ENSDARG00000036785 2163 1.487 - - - - - 0.700 - 0.787 - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
80. wasf2 ENSDARG00000024209 5338 1.483 - 0.724 - - - 0.759 - - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
81. atp6ap1b ENSDARG00000037153 3970 1.483 0.726 - - - - - - - 0.757 ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
82. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.482 - 0.765 - - - - - - 0.717 hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
83. vasp vasp 3925 1.481 - 0.778 - - - 0.703 - - -
84. cers1 ENSDARG00000063412 590 1.477 0.742 - - - - 0.735 - - - ceramide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-050208-406]
85. golgb1 ENSDARG00000061951 2023 1.475 - - - - - 0.728 - - 0.747 golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
86. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.459 - - - - - 0.722 - - 0.737 AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
87. ost4 ENSDARG00000096118 7679 1.454 - 0.710 - - - - - 0.744 - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
88. NUAK1 NUAK1 1074 1.452 0.747 0.705 - - - - - - -
89. capn9 ENSDARG00000012341 12911 1.451 0.742 - - - - - - 0.709 - calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
90. TSTA3 ENSDARG00000039666 1776 1.445 0.729 0.716 - - - - - - - tissue specific transplantation antigen P35B [Source:ZFIN;Acc:ZDB-GENE-040722-1]
91. ndrg1a ENSDARG00000032849 2406 1.43 0.710 0.720 - - - - - - - N-myc downstream regulated 1a [Source:ZFIN;Acc:ZDB-GENE-030826-34]
92. junba ENSDARG00000074378 301 1.426 0.714 - - - - 0.712 - - - JunB proto-oncogene, AP-1 transcription factor subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2172]
93. arpc3 ENSDARG00000057882 10113 0.99 - - - - - - 0.990 - - actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]
94. zgc:110339 ENSDARG00000046030 8180 0.986 - - - - - - 0.986 - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
95. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 0.984 - - - - - - 0.984 - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
96. ctnnb1 ENSDARG00000014571 12004 0.984 - - - - - - 0.984 - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
97. sub1a ENSDARG00000053446 13383 0.981 - - - - - - 0.981 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
98. dynll1 ENSDARG00000058454 33932 0.98 - - - - - - 0.980 - - dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
99. snrnp27 ENSDARG00000035625 9080 0.979 - - - - - - 0.979 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
100. ywhaqa ENSDARG00000042539 7034 0.979 - - - - - - 0.979 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]

There are 986 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA