Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdc6

Gene Name Gene ID Reads Annotation
cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]










Genes with expression patterns similar to cdc6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
2. ube2nb ENSDARG00000045877 4583 3.929 - 0.797 0.892 0.711 0.770 0.759 - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
3. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 3.446 - - 0.866 - - 0.903 0.839 0.838 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
4. cldn5a ENSDARG00000043716 3865 3.348 - - 0.901 0.752 - 0.810 - 0.885 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
5. kdm1a ENSDARG00000060679 6152 3.175 0.835 - - 0.743 - - 0.716 0.881 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
6. snrpd3l ENSDARG00000076283 7655 3.151 0.703 - - 0.820 - - 0.867 - 0.761 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
7. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 3.102 - - - 0.716 - 0.868 0.703 0.815 - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
8. hnrnpub ENSDARG00000004735 16496 3.097 - - - - 0.823 0.784 0.782 - 0.708 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
9. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 3.083 0.707 - - 0.728 - 0.943 0.705 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
10. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 3.075 0.708 0.803 - - - 0.842 0.722 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
11. GATAD2B ENSDARG00000005834 3855 3.057 - - 0.923 0.710 - 0.713 - - 0.711 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
12. khsrp ENSDARG00000026489 15738 3.056 0.791 - 0.711 - - 0.795 0.759 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
13. dpysl5a ENSDARG00000011141 1827 2.989 0.705 - - - - 0.810 0.714 0.760 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
14. zswim5 ENSDARG00000055900 4243 2.907 - - - - 0.705 0.719 0.721 0.762 - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
15. AGO1 ENSDARG00000092644 4521 2.878 0.730 - - - 0.735 - 0.709 0.704 - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
16. nfyba ENSDARG00000039185 1804 2.597 - - - - - 0.951 0.770 0.876 - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
17. mapk12b ENSDARG00000006409 2246 2.581 0.712 - 0.926 - - 0.943 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
18. sumo3a ENSDARG00000028119 13447 2.545 - - - 0.897 - 0.874 0.774 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
19. srpk1b ENSDARG00000031560 2079 2.514 0.740 - - 0.848 - 0.926 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
20. ubtf ENSDARG00000035066 4070 2.509 - - 0.962 - - 0.841 0.706 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
21. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.502 - - 0.844 0.793 - 0.865 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
22. CACFD1 ENSDARG00000090818 1298 2.496 - - - - - 0.899 0.767 0.830 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
23. npm1b ENSDARG00000037675 5448 2.493 0.795 - - - - 0.898 0.800 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
24. nxf1 ENSDARG00000055076 3251 2.491 - - 0.938 - - 0.847 0.706 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
25. nf1b ENSDARG00000004184 548 2.49 - - 0.919 - - 0.759 - 0.812 - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
26. gfap ENSDARG00000025301 5584 2.489 0.744 - 0.944 - - 0.801 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
27. notch1b ENSDARG00000052094 7874 2.488 - - - - - 0.947 0.731 0.810 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
28. aes ENSDARG00000021805, ENSDARG00000115836 1533 2.486 - - 0.918 0.724 - - - 0.844 - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
29. DTX4 ENSDARG00000076302 2642 2.462 - - - - 0.819 0.934 0.709 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
30. RSF1 RSF1 1242 2.462 0.771 0.744 0.947 - - - - - -
31. meis2b ENSDARG00000077840 5166 2.456 - 0.822 0.855 - - - 0.779 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
32. srp9 ENSDARG00000042851 3254 2.442 - - 0.848 - - 0.829 - 0.765 - signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
33. syncripl ENSDARG00000026723 3889 2.439 - - 0.861 - 0.736 - 0.842 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
34. eftud2 ENSDARG00000012261 3081 2.432 - 0.729 0.942 - 0.761 - - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
35. slbp ENSDARG00000100558 3405 2.43 - - - 0.880 0.779 - - 0.771 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
36. apex1 ENSDARG00000045843 6345 2.424 - 0.748 - - - - 0.854 0.822 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
37. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 2.424 - - 0.944 - 0.721 - - - 0.759 immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
38. vangl2 ENSDARG00000027397 2418 2.423 - - 0.936 0.757 - 0.730 - - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
39. rcor2 ENSDARG00000008278 1678 2.421 - - - 0.796 - 0.882 0.743 - - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
40. sae1 ENSDARG00000010487 2028 2.411 - - - 0.779 - 0.732 - 0.900 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
41. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 2.406 - - 0.854 0.795 - - 0.757 - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
42. nudt3a ENSDARG00000016256 2713 2.4 - - 0.912 - - - 0.743 0.745 - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
43. wu:fq41a10 wu:fq41a10 7009 2.398 - - 0.856 - 0.805 - 0.737 - -
44. ELOVL4 ELOVL4 3026 2.395 0.760 - 0.927 - - - 0.708 - -
45. rbb4 rbb4 15541 2.388 - - - - - - 0.791 0.857 0.740
46. gpatch2 1221 2.388 - - 0.941 - - 0.705 0.742 - - G patch domain containing 2, transcript variant X1
47. r3hcc1l ENSDARG00000089243 1254 2.384 - - - 0.708 - 0.897 0.779 - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
48. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.379 - - 0.911 - 0.703 - 0.765 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
49. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 2.361 - 0.718 - - - 0.778 - 0.865 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
50. cd99l2 ENSDARG00000056722 5036 2.354 - 0.741 - - - 0.906 0.707 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
51. mcm4 ENSDARG00000040041 7971 2.349 - - 0.889 - - - 0.725 0.735 - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
52. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.324 - - - 0.780 - - 0.815 - 0.729 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
53. mcm7 ENSDARG00000101180 12417 2.319 - - - 0.724 - - 0.752 0.843 - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
54. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.318 - - - - - 0.862 - 0.730 0.726 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
55. cplx2l ENSDARG00000018997 3975 2.314 0.705 - 0.905 - - - 0.704 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
56. nova1 ENSDARG00000020178 4129 2.308 - - - - - 0.754 0.722 0.832 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
57. hif1an ENSDARG00000031915 2098 2.304 - - - - - - 0.742 0.862 0.700 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
58. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.302 0.730 - - - - 0.872 0.700 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
59. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.293 - - - - 0.709 - 0.704 0.880 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
60. sema6a ENSDARG00000102165 1401 2.29 - 0.754 - - - 0.792 0.744 - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
61. abi2b ENSDARG00000014875 2259 2.266 0.729 - - - - 0.821 0.716 - - abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
62. ccnb3 ENSDARG00000034855, ENSDARG00000110875 2123 2.26 - 0.736 - - - 0.759 - 0.765 - cyclin B3 [Source:ZFIN;Acc:ZDB-GENE-060929-684]
63. arid2 ENSDARG00000007413 4413 2.253 - 0.700 - - 0.745 - 0.808 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
64. amph ENSDARG00000007663 599 2.252 0.731 - - - - 0.798 0.723 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
65. pomp ENSDARG00000032296 4439 2.247 - - 0.821 - 0.704 - 0.722 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
66. ZFHX3 ENSDARG00000103057 7759 2.245 0.768 - - - - 0.735 0.742 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
67. senp6a ENSDARG00000102923 908 2.244 - 0.706 - - - 0.833 0.705 - - SUMO specific peptidase 6a [Source:ZFIN;Acc:ZDB-GENE-080204-25]
68. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.228 - 0.723 - - - 0.800 0.705 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
69. phax ENSDARG00000044298 2302 2.227 0.726 - - - 0.709 - - - 0.792 phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
70. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 2.224 0.752 - - - 0.752 - 0.720 - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
71. tubb5 ENSDARG00000037997 18691 2.218 0.748 - 0.708 - - - 0.762 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
72. nrarpb ENSDARG00000018958 6225 2.217 0.716 - - 0.739 - 0.762 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
73. hmgb2b ENSDARG00000053990 11519 2.204 0.752 - - - - - 0.708 - 0.744 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
74. dek ENSDARG00000070108 2262 2.197 - - - - 0.787 0.707 - - 0.703 DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
75. tle2 5014 2.193 0.706 - - - - 0.759 0.728 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
76. znf319 znf319 3027 2.186 - 0.738 - - - - 0.714 - 0.734
77. ccnf ENSDARG00000105046 1790 2.166 - 0.716 - - 0.728 - - - 0.722 cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
78. nin ENSDARG00000060298 1558 1.884 - - 0.945 - - 0.939 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
79. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.872 - - 0.957 - - - - 0.915 - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
80. sf3a3 ENSDARG00000100114 4511 1.865 - - 0.950 - - - - 0.915 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
81. atoh1b ENSDARG00000099564 494 1.854 - - 0.937 - - 0.917 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
82. znf292b ENSDARG00000043973 3791 1.824 - - 0.912 - - - 0.912 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
83. gak ENSDARG00000090654 695 1.816 - - 0.920 - - 0.896 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
84. syt11a ENSDARG00000057913 1145 1.815 - - 0.917 - - 0.898 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
85. stap2a ENSDARG00000092810 591 1.787 - - - - - 0.895 - 0.892 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
86. zbtb18 ENSDARG00000028228 3653 1.787 - - 0.941 - - 0.846 - - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
87. WDFY3 ENSDARG00000078890 2092 1.786 - - 0.913 - - 0.873 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
88. ercc2 ENSDARG00000021985 678 1.778 - - 0.918 - - 0.860 - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
89. daxx ENSDARG00000000729 734 1.777 - - - - - 0.944 - 0.833 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
90. si:dkey-19e4.5 ENSDARG00000089886 2562 1.772 - - 0.934 - - - - 0.838 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
91. dlb ENSDARG00000004232 5120 1.768 - - 0.935 - - - - 0.833 - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
92. myo1b ENSDARG00000024694 1761 1.768 - - 0.927 - - 0.841 - - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
93. zmiz1a ENSDARG00000074502 3920 1.767 - - 0.940 - - - 0.827 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
94. AL929115.2 AL929115.2 952 1.764 - - - - - 0.897 - 0.867 -
95. ZNF576 ZNF576 1447 1.762 - - 0.935 - - - - 0.827 -
96. tmed4 ENSDARG00000024954 3476 1.759 - - 0.929 - - - - 0.830 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
97. tubgcp2 ENSDARG00000013079 1520 1.75 - - 0.936 - - 0.814 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
98. hoxc1a ENSDARG00000070337 1460 1.746 0.833 - - - - 0.913 - - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
99. CR387996.2 CR387996.2 1272 1.746 - 0.823 0.923 - - - - - -
100. ncalda ENSDARG00000070688 5069 1.745 - 0.810 0.935 - - - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]

There are 2944 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA