Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdc42se1

Gene Name Gene ID Reads Annotation
cdc42se1 ENSDARG00000023724 3901 CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]










Genes with expression patterns similar to cdc42se1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdc42se1 ENSDARG00000023724 3901 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
2. chmp2bb ENSDARG00000002190 4629 2.675 - 0.951 - - - 0.960 0.764 - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
3. arhgef1b ENSDARG00000055837 2330 2.65 - 0.953 - - 0.938 - 0.759 - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
4. stk40 ENSDARG00000098135 2683 2.472 - - - 0.754 - 0.988 0.730 - - serine/threonine kinase 40 [Source:ZFIN;Acc:ZDB-GENE-030131-4831]
5. fubp1 ENSDARG00000029248 15259 2.463 - 0.929 - - 0.782 0.752 - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
6. btbd10b ENSDARG00000020252 7251 2.431 - - - 0.767 0.945 - 0.719 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
7. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.981 - 0.991 - - - 0.990 - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
8. CNOT2 ENSDARG00000061802 1500 1.933 - 0.983 - - 0.950 - - - - CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]
9. farp1 ENSDARG00000074381 406 1.919 - 0.979 - - 0.940 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
10. mier1a ENSDARG00000041072 1690 1.914 - - - - 0.921 0.993 - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
11. amot ENSDARG00000078335 1757 1.887 - 0.977 - - 0.910 - - - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
12. zgc:110333 ENSDARG00000040628 3250 1.879 - 0.888 - - - 0.991 - - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
13. poc1bl ENSDARG00000012745 2451 1.861 - - - - 0.930 0.931 - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
14. dot1l ENSDARG00000061992 602 1.848 - - - 0.855 - 0.993 - - - DOT1-like histone H3K79 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060503-341]
15. cplx4b ENSDARG00000059486 3192 1.839 - - - 0.855 - 0.984 - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
16. nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 1.836 - 0.987 - - - - 0.849 - - nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]
17. rcn1 ENSDARG00000070006 8455 1.834 - 0.915 - - 0.919 - - - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
18. zgc:77262 ENSDARG00000044545 5563 1.833 - - - - 0.854 0.979 - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
19. cpne1 ENSDARG00000075536 4063 1.829 - - - - - 0.988 0.841 - - copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
20. rpa2 ENSDARG00000037188 4284 1.809 - - - - 0.820 0.989 - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
21. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 1.805 - 0.986 - - - - 0.819 - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
22. ahr2 ENSDARG00000021833 762 1.798 - 0.980 - 0.818 - - - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
23. COLGALT1 ENSDARG00000073974 5069 1.794 - - - - 0.931 - 0.863 - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
24. tmem62 ENSDARG00000053890 1233 1.791 - - - - 0.938 - 0.853 - - transmembrane protein 62 [Source:ZFIN;Acc:ZDB-GENE-040426-1837]
25. trpc4apa ENSDARG00000018840 2543 1.79 - 0.986 - 0.804 - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
26. nop16 ENSDARG00000044402 3645 1.781 - 0.963 - - 0.818 - - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
27. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.774 - - - - - 0.988 0.786 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
28. SLC25A22 2190 1.773 - - - - - 0.985 0.788 - - solute carrier family 25 (mitochondrial carrier: glutamate), member 22, transcript variant X2
29. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.772 - 0.948 - - - 0.824 - - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
30. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.762 - 0.976 - 0.786 - - - - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
31. wu:fk48d07 wu:fk48d07 13245 1.762 - 0.858 - - - 0.904 - - -
32. rhoad rhoad 8007 1.761 - 0.967 - - 0.794 - - - -
33. PELP1 ENSDARG00000079313 5771 1.757 - 0.959 - - - - 0.798 - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
34. maea ENSDARG00000053691 1840 1.751 - 0.981 - - - - 0.770 - - macrophage erythroblast attacher [Source:ZFIN;Acc:ZDB-GENE-030131-294]
35. btr12 ENSDARG00000051809 1804 1.733 - - - - 0.936 - 0.797 - - bloodthirsty-related gene family, member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-548]
36. clint1a ENSDARG00000025535 4965 1.73 - 0.910 - - - - 0.820 - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
37. tmem135 ENSDARG00000069157 918 1.722 - - - 0.777 0.945 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
38. pdia5 ENSDARG00000069242 3576 1.72 - 0.981 - - - - 0.739 - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
39. eif6 ENSDARG00000020232 2744 1.719 - 0.731 - - - 0.988 - - - eukaryotic translation initiation factor 6 [Source:ZFIN;Acc:ZDB-GENE-031118-110]
40. ttc3 ENSDARG00000086075 2157 1.719 - 0.986 - - - - 0.733 - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
41. GRB10 GRB10 1496 1.717 - - - 0.745 - 0.972 - - -
42. psmc2 ENSDARG00000020101 8095 1.716 - - - - - 0.984 0.732 - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
43. irf6 ENSDARG00000101986 1438 1.716 - - - - - 0.969 0.747 - - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
44. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.716 - 0.956 - - 0.760 - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
45. fam3a ENSDARG00000070675, ENSDARG00000115910 1377 1.71 - - - - - 0.994 0.716 - - family with sequence similarity 3, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1772]
46. SMARCA1 ENSDARG00000012776 673 1.708 - 0.982 - - - - 0.726 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
47. palm3 ENSDARG00000071215 1776 1.705 - - - - - 0.991 0.714 - - paralemmin 3 [Source:ZFIN;Acc:ZDB-GENE-061215-74]
48. si:dkey-9i23.16 ENSDARG00000093954 929 1.703 - - - 0.711 - 0.992 - - - si:dkey-9i23.16 [Source:ZFIN;Acc:ZDB-GENE-090313-362]
49. FP236813.1 FP236813.1 1842 1.701 - 0.978 - - - - 0.723 - -
50. gata5 ENSDARG00000017821 1146 1.697 - 0.961 - - - - 0.736 - - GATA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-980526-340]
51. sepw1 17630 1.695 - - - - - 0.958 0.737 - - selenoprotein W, 1
52. suv420h1 1810 1.691 - - - 0.700 - 0.991 - - - suppressor of variegation 4-20 homolog 1 (Drosophila)
53. elovl7b ENSDARG00000100185 2032 1.688 - - - - - 0.986 - - 0.702 ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
54. tuft1b ENSDARG00000071010 909 1.685 - - - - 0.947 - 0.738 - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
55. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.683 - 0.924 - - - - 0.759 - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
56. cltca ENSDARG00000043493, ENSDARG00000115370 12561 1.683 - - - - - 0.978 0.705 - - clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
57. eif3ea ENSDARG00000090697 14670 1.679 - 0.853 - - - 0.826 - - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
58. gpx4b ENSDARG00000076836 8085 1.675 - - - - - 0.953 0.722 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
59. hsd17b12a ENSDARG00000015709 2499 1.649 - - - - - 0.936 0.713 - - hydroxysteroid (17-beta) dehydrogenase 12a [Source:ZFIN;Acc:ZDB-GENE-030131-5628]
60. dnajc1 ENSDARG00000001940 2848 1.643 0.722 - - - 0.921 - - - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
61. wls ENSDARG00000009534 8719 1.635 - 0.917 - - - - 0.718 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
62. eif2s3 ENSDARG00000008292 17051 1.623 - - - - 0.751 0.872 - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
63. g6pca.2 ENSDARG00000013721 2034 1.601 - - - - 0.878 - 0.723 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
64. TRIM14 TRIM14 1424 1.573 - - - 0.758 - 0.815 - - -
65. coro1ca ENSDARG00000035598 9278 1.572 - - - - - 0.816 0.756 - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
66. mical2b ENSDARG00000020395 470 1.571 - - - 0.796 - - 0.775 - - microtubule associated monooxygenase, calponin and LIM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061207-15]
67. gas1a ENSDARG00000077298 10891 1.555 - - - - 0.750 0.805 - - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
68. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.553 - - - - - 0.847 0.706 - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
69. abracl ENSDARG00000042876 10208 1.548 - - - - - 0.845 0.703 - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
70. arhgdig ENSDARG00000004034 10368 1.543 - - - - - 0.730 0.813 - - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
71. ywhaz ENSDARG00000032575 15257 1.542 - - - - - 0.727 0.815 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
72. SCYL2 ENSDARG00000032627 683 1.535 - - - 0.770 - - 0.765 - - SCY1 like pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:19286]
73. CD99L2 ENSDARG00000056722 5588 1.531 - 0.797 - - - - 0.734 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
74. si:dkey-193c22.2 ENSDARG00000076735 2791 1.521 - - - - - - - 0.738 0.783 si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
75. slc7a8a ENSDARG00000075831 2987 1.503 - - - 0.776 - - 0.727 - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
76. si:ch211-87l2.1 si:ch211-87l2.1 2403 1.473 - - - - - - 0.702 - 0.771
77. ier3ip1 ENSDARG00000039601 5529 1.463 - 0.726 - - - - - 0.737 - immediate early response 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050506-106]
78. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.451 - - - 0.720 - - 0.731 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
79. osgn1 ENSDARG00000052279 5607 0.996 - - - - - 0.996 - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
80. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 0.996 - - - - - 0.996 - - - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
81. peli2 ENSDARG00000029045 844 0.995 - - - - - 0.995 - - - pellino E3 ubiquitin protein ligase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-360]
82. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 0.994 - - - - - 0.994 - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
83. RAB11FIP5 RAB11FIP5 626 0.994 - - - - - 0.994 - - -
84. rnf13 ENSDARG00000019438 1560 0.994 - - - - - 0.994 - - - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
85. si:dkey-221j11.3 ENSDARG00000093304 1001 0.994 - - - - - 0.994 - - - si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
86. cyp20a1 ENSDARG00000006040 2570 0.994 - - - - - 0.994 - - - cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2646]
87. crfb17 511 0.994 - - - - - 0.994 - - - cytokine receptor family member B17
88. sec62 ENSDARG00000019951 3724 0.994 - - - - - 0.994 - - - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
89. si:ch211-232i5.1 ENSDARG00000078072 1337 0.994 - - - - - 0.994 - - - si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
90. chmp4c ENSDARG00000007418, ENSDARG00000110750 729 0.993 - - - - - 0.993 - - - charged multivesicular body protein 4C [Source:ZFIN;Acc:ZDB-GENE-050417-389]
91. MON1B_1 MON1B_1 697 0.993 - - - - - 0.993 - - -
92. styk1 1199 0.993 - - - - - 0.993 - - - serine/threonine/tyrosine kinase 1
93. irs2 irs2 392 0.993 - - - - - 0.993 - - -
94. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 0.993 - - - - - 0.993 - - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
95. ins ENSDARG00000035350, ENSDARG00000116735 317 0.993 - - - - - 0.993 - - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
96. gk5 ENSDARG00000062864 738 0.993 - - - - - 0.993 - - - glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
97. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 0.993 - - - - - 0.993 - - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
98. ptprfb ENSDARG00000005754 7178 0.993 - - - - - 0.993 - - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
99. chid1 ENSDARG00000069673 675 0.993 - - - - - 0.993 - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
100. epc1 epc1 1164 0.993 - - - - - 0.993 - - -

There are 1228 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA