Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdc42ep4b

Gene Name Gene ID Reads Annotation
cdc42ep4b ENSDARG00000045036 1295 CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]










Genes with expression patterns similar to cdc42ep4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdc42ep4b ENSDARG00000045036 1295 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
2. srebf2 ENSDARG00000063438 1982 2.512 - - - - - 0.877 0.750 - 0.885 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
3. arpc5b ENSDARG00000019062 2786 2.483 - 0.828 - - - 0.793 0.862 - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
4. SVIL SVIL 2589 2.352 - - - - - 0.838 0.765 0.749 -
5. ptpn13 ENSDARG00000103699 2866 2.277 0.705 - - - - - 0.714 - 0.858 protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
6. abcc4 ENSDARG00000058953, ENSDARG00000115375 1990 1.755 - 0.903 - - - 0.852 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-511]
7. FAM83G ENSDARG00000062929 1142 1.747 - - - - - - 0.793 - 0.954 family with sequence similarity 83 member G [Source:HGNC Symbol;Acc:HGNC:32554]
8. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.724 - - - - - - - 0.795 0.929 amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
9. commd4 ENSDARG00000061946 3281 1.713 - 0.795 - - - - - - 0.918 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
10. nudt9 ENSDARG00000087927 1148 1.709 - 0.801 - - - - - - 0.908 nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
11. homer3 homer3 1974 1.7 - - - - - - - 0.771 0.929
12. smad2 ENSDARG00000006389 646 1.693 - 0.763 - - - - - - 0.930 SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
13. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.682 - - - - - 0.921 0.761 - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
14. nme3 ENSDARG00000100990 3889 1.681 - - - - - 0.942 0.739 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
15. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.679 - - - - - - - 0.815 0.864 structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
16. map4k3a ENSDARG00000087742 771 1.677 - - - - - 0.753 - - 0.924 mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
17. chl1a ENSDARG00000077881 1488 1.677 - - - - - - 0.746 - 0.931 cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
18. gata6 ENSDARG00000103589 746 1.667 - - - - - 0.850 0.817 - - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
19. TCIRG1 TCIRG1 875 1.665 - - - - - 0.733 - - 0.932
20. CU915738.1 CU915738.1 3723 1.66 - - - - - - 0.783 - 0.877
21. lamb1a ENSDARG00000101209 5396 1.656 - 0.948 - - - 0.708 - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
22. itgb1b.1 ENSDARG00000053232 4721 1.654 - 0.771 - - - 0.883 - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
23. gnb1b ENSDARG00000104372 1077 1.652 - - - - - - 0.734 - 0.918 guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
24. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.641 - 0.747 - - - 0.894 - - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
25. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.634 - - - - - - - 0.707 0.927 erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
26. sepp1b 1004 1.634 - 0.725 - - - 0.909 - - - selenoprotein P, plasma, 1b
27. bambib ENSDARG00000099677 4267 1.633 - 0.790 - - - 0.843 - - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
28. npc1 ENSDARG00000017180 3724 1.632 - 0.757 - - - 0.875 - - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
29. cyp3c1 ENSDARG00000015575 825 1.616 - - - - - 0.766 0.850 - - cytochrome P450, family 3, subfamily c, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3060]
30. pttg1ipb ENSDARG00000040039 598 1.61 0.823 - - - - - - 0.787 - PTTG1 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-041010-10]
31. shc1 ENSDARG00000075437 3278 1.609 - 0.807 - - - - 0.802 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
32. slc37a4a ENSDARG00000038106 1375 1.6 - - - - - 0.809 0.791 - - solute carrier family 37 (glucose-6-phosphate transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2230]
33. rpe65b ENSDARG00000094752, ENSDARG00000113621 463 1.595 - 0.756 - - - 0.839 - - - retinal pigment epithelium-specific protein 65b [Source:ZFIN;Acc:ZDB-GENE-050410-16]
34. slc39a5 ENSDARG00000079525 2157 1.594 - 0.747 - - - 0.847 - - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
35. ccdc3 ccdc3 559 1.594 - - - - - 0.845 - 0.749 -
36. LIMD2 ENSDARG00000078092 3414 1.592 - - - - - 0.845 0.747 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
37. si:dkeyp-110e4.6 ENSDARG00000061845 1755 1.589 - 0.824 - - - - - 0.765 - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
38. coro2a ENSDARG00000005210 1479 1.588 - 0.741 - - - 0.847 - - - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
39. macc1 ENSDARG00000040717 1669 1.587 0.792 0.795 - - - - - - - metastasis associated in colon cancer 1 [Source:ZFIN;Acc:ZDB-GENE-091006-3]
40. cd2ap ENSDARG00000015224 2830 1.587 - - - - - 0.776 0.811 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
41. CFI 3801 1.587 - 0.730 - - - 0.857 - - - complement factor I
42. ugt5a5 807 1.581 - - - - - 0.763 0.818 - - UDP glucuronosyltransferase 5 family, polypeptide A5
43. copa ENSDARG00000004173 3977 1.579 - 0.774 - - - - 0.805 - - coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
44. tinagl1 ENSDARG00000061231 2677 1.577 - - - - - 0.798 0.779 - - tubulointerstitial nephritis antigen-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-240]
45. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.574 - 0.736 - - - - - 0.838 - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
46. txn ENSDARG00000044125, ENSDARG00000116040 4758 1.57 - 0.747 - - - 0.823 - - - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
47. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.566 - 0.834 - - - 0.732 - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
48. nap1l4b ENSDARG00000068868 3285 1.565 - - - - - - - 0.703 0.862 nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
49. renbp ENSDARG00000008931 1848 1.565 - 0.707 - - - 0.858 - - - renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
50. lpcat3 ENSDARG00000075178, ENSDARG00000109670 2713 1.564 - - - - - - 0.826 0.738 - lysophosphatidylcholine acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041111-232]
51. fam219aa ENSDARG00000016396 1788 1.563 - 0.798 - - - - - 0.765 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
52. epb41l4b ENSDARG00000061398 721 1.563 0.712 0.851 - - - - - - - erythrocyte membrane protein band 4.1 like 4B [Source:ZFIN;Acc:ZDB-GENE-100921-92]
53. cyfip1 ENSDARG00000044345 5483 1.561 - - - - - - 0.778 - 0.783 cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
54. zgc:56530 zgc:56530 6300 1.561 - - - - - - 0.701 - 0.860
55. capn2b ENSDARG00000055592 5431 1.557 - - - - - - 0.773 - 0.784 calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
56. fuca2 ENSDARG00000044073, ENSDARG00000115098 1199 1.557 - 0.834 - - - - 0.723 - - alpha-L-fucosidase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-39]
57. urah urah 4152 1.555 - 0.762 - - - 0.793 - - -
58. DLC1 ENSDARG00000079317 2149 1.553 - - - - - 0.800 0.753 - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
59. abcb5 ENSDARG00000021787 2875 1.549 - 0.798 - - - 0.751 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6414]
60. serinc2 ENSDARG00000056532 1406 1.545 - 0.736 - - - - 0.809 - - serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
61. sepw1 17630 1.542 - 0.711 - - - - - - 0.831 selenoprotein W, 1
62. zfand5b ENSDARG00000002271 4145 1.54 - 0.704 - - - - - - 0.836 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
63. chmp4c ENSDARG00000007418, ENSDARG00000110750 729 1.535 0.781 - - - - - 0.754 - - charged multivesicular body protein 4C [Source:ZFIN;Acc:ZDB-GENE-050417-389]
64. si:dkey-30c15.13 ENSDARG00000069524, ENSDARG00000114258 403 1.534 - - - - - 0.809 0.725 - - si:dkey-30c15.13 [Source:ZFIN;Acc:ZDB-GENE-060503-73]
65. cnn3a ENSDARG00000099510 6063 1.533 - - - - - - 0.702 - 0.831 calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
66. rhbg ENSDARG00000009018 1131 1.531 - - - - - 0.775 0.756 - - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
67. ptbp3 ENSDARG00000043757 6760 1.53 - - - - - - 0.753 - 0.777 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
68. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.527 - - - - - - 0.784 0.743 - tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
69. pof1b ENSDARG00000054060 2355 1.527 0.713 - - - - - - - 0.814 POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
70. igfbp2b ENSDARG00000031422 679 1.524 - - - - - 0.785 - 0.739 - insulin-like growth factor binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-090107-3]
71. bbip1 ENSDARG00000071046, ENSDARG00000112897, ENSDARG00000116522 1062 1.523 0.747 - - - - - 0.776 - - BBSome interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050208-445]
72. evx1 ENSDARG00000099365, ENSDARG00000100087 609 1.516 - 0.747 - - - 0.769 - - - even-skipped homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-364]
73. degs2 ENSDARG00000042544 1912 1.512 - 0.705 - - - - 0.807 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
74. aqp11 ENSDARG00000100555 983 1.508 - 0.713 - - - 0.795 - - - aquaporin 11 [Source:ZFIN;Acc:ZDB-GENE-080418-1]
75. scrn2 ENSDARG00000043497 204 1.508 - - - - - 0.714 - 0.794 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
76. cfd ENSDARG00000039579, ENSDARG00000110892, ENSDARG00000115542 670 1.507 - 0.734 - - - 0.773 - - - complement factor D (adipsin) [Source:ZFIN;Acc:ZDB-GENE-050522-411]
77. adamts1 ENSDARG00000103519 539 1.498 - 0.794 - - - - 0.704 - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
78. mpc1 ENSDARG00000093448 382 1.498 - - - - - 0.744 0.754 - - mitochondrial pyruvate carrier 1 [Source:ZFIN;Acc:ZDB-GENE-040718-94]
79. cables2a ENSDARG00000076964 1330 1.497 - 0.784 - - - - 0.713 - - Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
80. zgc:158403 ENSDARG00000062757 710 1.497 - 0.783 - - - 0.714 - - - zgc:158403 [Source:ZFIN;Acc:ZDB-GENE-061215-116]
81. tmem176l.4 ENSDARG00000074390 1886 1.493 - - - - - 0.790 0.703 - - transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
82. zgc:110626 ENSDARG00000053159 1124 1.487 - - - - - - 0.705 0.782 - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
83. churc1 ENSDARG00000010831, ENSDARG00000113360 1271 1.48 - 0.751 - - - - 0.729 - - churchill domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-150]
84. sidt2 ENSDARG00000045976 1997 1.473 - - - - - 0.773 0.700 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
85. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 1.468 - 0.705 - - - - - 0.763 - Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
86. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.45 - - - - - - 0.734 0.716 - zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
87. rbp2a ENSDARG00000070038, ENSDARG00000115141 1688 1.448 - 0.727 - - - - 0.721 - - retinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
88. nuak2 ENSDARG00000063661 610 1.442 - - - - - 0.724 0.718 - - NUAK family, SNF1-like kinase, 2 [Source:ZFIN;Acc:ZDB-GENE-050208-563]
89. TMEM179 ENSDARG00000013292 3452 1.439 - - - - - 0.733 0.706 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
90. axin2 ENSDARG00000100149 4223 1.436 - - - - - - 0.722 0.714 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
91. cfh ENSDARG00000100442, ENSDARG00000109660 2043 1.434 - 0.714 - - - 0.720 - - - complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]
92. shisa2 856 1.431 - 0.709 - - - 0.722 - - - shisa family member 2, transcript variant X2
93. si:ch73-303g23.4 si:ch73-303g23.4 386 1.428 0.723 0.705 - - - - - - -
94. sptbn2 ENSDARG00000053956 8452 1.426 - 0.707 - - - 0.719 - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
95. itih2 ENSDARG00000045516 1893 1.425 - 0.706 - - - 0.719 - - - inter-alpha-trypsin inhibitor heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1942]
96. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.422 - - - - - 0.710 0.712 - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
97. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.42 - 0.708 - - - 0.712 - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
98. CR388095.3 CR388095.3 2548 0.964 - - - - - - - 0.964 -
99. tm2d3 ENSDARG00000076618 2310 0.954 - - - - - - - - 0.954 TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
100. wdr66 ENSDARG00000059855 276 0.937 - - - - - - - - 0.937 WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]

There are 1545 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA