Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdc42ep3

Gene Name Gene ID Reads Annotation
cdc42ep3 ENSDARG00000052783 1485 CDC42 effector protein (Rho GTPase binding) 3 [Source:ZFIN;Acc:ZDB-GENE-040912-89]










Genes with expression patterns similar to cdc42ep3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdc42ep3 ENSDARG00000052783 1485 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC42 effector protein (Rho GTPase binding) 3 [Source:ZFIN;Acc:ZDB-GENE-040912-89]
2. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 1.664 - 0.841 - - - 0.823 - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
3. lepr ENSDARG00000070961, ENSDARG00000112744, ENSDARG00000114564 1014 1.659 - 0.881 - - - - 0.778 - - leptin receptor [Source:ZFIN;Acc:ZDB-GENE-080104-1]
4. ankra2 ENSDARG00000035399, ENSDARG00000111289 1303 1.657 - 0.907 - - - - 0.750 - - ankyrin repeat, family A (RFXANK-like), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2141]
5. pdk1 ENSDARG00000013128 526 1.613 - 0.885 - - - - 0.728 - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
6. PHF13 ENSDARG00000102023 1102 1.572 - 0.864 - - - 0.708 - - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
7. PLCL2 ENSDARG00000098826 596 1.562 - 0.843 - 0.719 - - - - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
8. pak4 ENSDARG00000018110 1962 1.553 - 0.819 - - - - 0.734 - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
9. zgc:113054 ENSDARG00000053483 1079 1.549 - 0.761 - - - - 0.788 - - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
10. lrig1 ENSDARG00000075625 2027 1.546 - 0.812 - - - 0.734 - - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
11. hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 1.546 - 0.796 - - - 0.750 - - - hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]
12. pcnp ENSDARG00000037713 2754 1.53 0.724 0.806 - - - - - - - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
13. ube2g2 ENSDARG00000025404 1774 1.526 - 0.816 - - - - - 0.710 - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
14. spry4 ENSDARG00000068732 2091 1.526 - 0.816 - - - - 0.710 - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
15. synpo2lb ENSDARG00000078696 2361 1.491 - - - 0.735 - 0.756 - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
16. fbxo9 ENSDARG00000011055 1388 1.491 - - - - - 0.763 0.728 - - F-box protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-4194]
17. RSL1D1 ENSDARG00000055868, ENSDARG00000115696 3825 1.465 - 0.735 - - - - 0.730 - - ribosomal L1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130603-67]
18. ppp1r14bb ENSDARG00000030161 2349 0.965 - 0.965 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
19. rrn3 ENSDARG00000102997 721 0.964 - 0.964 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:ZFIN;Acc:ZDB-GENE-080225-1]
20. cxxc1 cxxc1 914 0.96 - 0.960 - - - - - - -
21. bcs1l ENSDARG00000012295 664 0.933 - 0.933 - - - - - - - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
22. si:ch211-218g4.2 ENSDARG00000078145 778 0.925 - 0.925 - - - - - - - si:ch211-218g4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-60]
23. endog ENSDARG00000058865 679 0.924 - 0.924 - - - - - - - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
24. KIAA0355 3250 0.92 - 0.920 - - - - - - - KIAA0355 ortholog, transcript variant X1
25. bcl7a ENSDARG00000052907, ENSDARG00000111533 962 0.919 - 0.919 - - - - - - - BCL tumor suppressor 7A [Source:ZFIN;Acc:ZDB-GENE-000607-16]
26. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 0.918 - 0.918 - - - - - - - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
27. C11H9orf89 C11H9orf89 477 0.917 - 0.917 - - - - - - -
28. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 0.911 - 0.911 - - - - - - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
29. wwp2 ENSDARG00000061345 3459 0.91 - 0.910 - - - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
30. HUS1 ENSDARG00000101611 187 0.91 - 0.910 - - - - - - - HUS1 checkpoint clamp component [Source:HGNC Symbol;Acc:HGNC:5309]
31. FHOD3 FHOD3 422 0.909 - 0.909 - - - - - - -
32. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 0.907 - 0.907 - - - - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
33. lhfp 700 0.906 - 0.906 - - - - - - - lipoma HMGIC fusion partner
34. hs6st1b ENSDARG00000071501, ENSDARG00000116688 843 0.906 - 0.906 - - - - - - - heparan sulfate 6-O-sulfotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-070103-2]
35. CR354611.2 CR354611.2 2040 0.905 - 0.905 - - - - - - -
36. si:dkey-57k17.1 ENSDARG00000104697 442 0.904 - 0.904 - - - - - - - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
37. ldb1a ENSDARG00000010137 3035 0.903 - 0.903 - - - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
38. C18H16orf70 C18H16orf70 542 0.902 - 0.902 - - - - - - -
39. NAIF1 ENSDARG00000062753 696 0.902 - 0.902 - - - - - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
40. zgc:162232 zgc:162232 251 0.902 - 0.902 - - - - - - -
41. tsc1b ENSDARG00000057918 738 0.901 - 0.901 - - - - - - - TSC complex subunit 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3404]
42. lyrm1 ENSDARG00000026281 303 0.901 - 0.901 - - - - - - - LYR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-210]
43. fam43a ENSDARG00000043009 792 0.9 - 0.900 - - - - - - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
44. arid1aa ENSDARG00000101710 3644 0.9 - 0.900 - - - - - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
45. loxl2b ENSDARG00000044074 1919 0.899 - 0.899 - - - - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
46. insrb ENSDARG00000071524 1820 0.899 - 0.899 - - - - - - - insulin receptor b [Source:ZFIN;Acc:ZDB-GENE-020503-4]
47. ftsjd2 ftsjd2 2694 0.899 - 0.899 - - - - - - -
48. CHORDC1 CHORDC1 544 0.899 - 0.899 - - - - - - -
49. prelid1b ENSDARG00000044169 501 0.898 - 0.898 - - - - - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
50. sppl2 ENSDARG00000030448 1040 0.898 - 0.898 - - - - - - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
51. coq3 ENSDARG00000069857, ENSDARG00000110000 708 0.897 - 0.897 - - - - - - - coenzyme Q3 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040718-364]
52. hspb9 ENSDARG00000078674 2755 0.896 - 0.896 - - - - - - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
53. nol9 ENSDARG00000077751 2471 0.896 - 0.896 - - - - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
54. bccip ENSDARG00000004948 593 0.895 - 0.895 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:ZFIN;Acc:ZDB-GENE-050320-39]
55. COL4A3BP COL4A3BP 3288 0.894 - 0.894 - - - - - - -
56. gtf2h5 ENSDARG00000056099, ENSDARG00000114297 1331 0.893 - 0.893 - - - - - - - general transcription factor IIH, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-041001-144]
57. pcnxl4 377 0.893 - 0.893 - - - - - - - pecanex-like 4 (Drosophila), transcript variant X2
58. mto1 ENSDARG00000055679 859 0.892 - 0.892 - - - - - - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
59. PRKAB2 2489 0.892 - 0.892 - - - - - - - protein kinase, AMP-activated, beta 2 non-catalytic subunit
60. surf1 ENSDARG00000003592 551 0.892 - 0.892 - - - - - - - surfeit 1 [Source:ZFIN;Acc:ZDB-GENE-041108-2]
61. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 0.891 - 0.891 - - - - - - - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
62. ndst2a ENSDARG00000086269 754 0.89 - 0.890 - - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
63. lrrc8da ENSDARG00000103370 676 0.89 - 0.890 - - - - - - - leucine rich repeat containing 8 VRAC subunit Da [Source:ZFIN;Acc:ZDB-GENE-061009-26]
64. kif2c ENSDARG00000076228 2281 0.889 - 0.889 - - - - - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
65. slc25a5 ENSDARG00000092553 626 0.889 - 0.889 - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
66. rb1 ENSDARG00000006782 1445 0.889 - 0.889 - - - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
67. bmpr1ba ENSDARG00000104100 828 0.888 - 0.888 - - - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
68. sec22a ENSDARG00000078328 1207 0.887 - 0.887 - - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
69. zgc:136892 ENSDARG00000069505 365 0.887 - 0.887 - - - - - - - zgc:136892 [Source:ZFIN;Acc:ZDB-GENE-060421-4745]
70. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 0.887 - 0.887 - - - - - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
71. pgd ENSDARG00000015343, ENSDARG00000117150 2512 0.886 - 0.886 - - - - - - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
72. immt ENSDARG00000102874 3435 0.886 - 0.886 - - - - - - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
73. tubg1 ENSDARG00000015610 2433 0.886 - 0.886 - - - - - - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
74. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 0.886 - 0.886 - - - - - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
75. znrd1 ENSDARG00000036070 684 0.886 - 0.886 - - - - - - - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
76. vdac1 ENSDARG00000045132 8051 0.886 - 0.886 - - - - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
77. GIT1 ENSDARG00000039489 1157 0.884 - 0.884 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
78. exo1 ENSDARG00000056832, ENSDARG00000112534 186 0.884 - 0.884 - - - - - - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
79. ZNF281 ZNF281 1946 0.884 - 0.884 - - - - - - -
80. pnpla7a ENSDARG00000062986 1793 0.883 - 0.883 - - - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
81. DLGAP4 DLGAP4 443 0.883 - 0.883 - - - - - - -
82. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 0.883 - 0.883 - - - - - - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
83. asmtl ENSDARG00000021433, ENSDARG00000114151 550 0.881 - 0.881 - - - - - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
84. pxdc1b ENSDARG00000040309 571 0.881 - 0.881 - - - - - - - PX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-091204-294]
85. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 0.881 - 0.881 - - - - - - - RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
86. sema5a ENSDARG00000058821 333 0.88 - 0.880 - - - - - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
87. cdh11 ENSDARG00000021442 1601 0.88 - 0.880 - - - - - - - cadherin 11, type 2, OB-cadherin (osteoblast) [Source:ZFIN;Acc:ZDB-GENE-980526-170]
88. tdrd3 ENSDARG00000025421 633 0.88 - 0.880 - - - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
89. Metazoa_SRP_7 Metazoa_SRP_7 513 0.879 - 0.879 - - - - - - -
90. ENSDARG00000074705 ENSDARG00000074705 507 0.878 - 0.878 - - - - - - -
91. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 0.878 - 0.878 - - - - - - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
92. si:ch211-120e1.6 si:ch211-120e1.6 292 0.878 - 0.878 - - - - - - -
93. ankrd50l ENSDARG00000007077 1115 0.877 - 0.877 - - - - - - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
94. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 0.877 - 0.877 - - - - - - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
95. hdac6 ENSDARG00000008384 144 0.877 - 0.877 - - - - - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
96. si:ch73-138e16.8 175 0.876 - 0.876 - - - - - - - si:ch73-138e16.8
97. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.876 - 0.876 - - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
98. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 0.874 - 0.874 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
99. cry5 ENSDARG00000019498 90 0.874 - 0.874 - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
100. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 0.873 - 0.873 - - - - - - - hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]

There are 618 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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