Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdc42

Gene Name Gene ID Reads Annotation
cdc42 ENSDARG00000044573 11795 cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]










Genes with expression patterns similar to cdc42

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdc42 ENSDARG00000044573 11795 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
2. zgc:63587 ENSDARG00000017140 8399 2.769 - - - 0.996 - 0.826 0.947 - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
3. fam32al fam32al 5716 2.738 - 0.812 - - 0.964 0.962 - - -
4. srm ENSDARG00000055760 6572 2.625 - 0.763 - - 0.970 - 0.892 - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
5. hnrnpk ENSDARG00000018914 8841 2.435 0.712 - 0.816 - 0.907 - - - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
6. srrm2 ENSDARG00000037965 1967 2.42 0.743 - 0.786 - - - 0.891 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
7. inppl1a ENSDARG00000104222 6256 2.415 - 0.793 0.784 - - - 0.838 - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
8. zgc:63637 zgc:63637 3636 2.413 0.753 - - - - 0.937 - - 0.723
9. SERBP1 SERBP1 9276 2.317 - 0.719 0.765 - 0.833 - - - -
10. cnih cnih 8292 2.308 0.708 - - - - - 0.882 0.718 -
11. ddx39ab ENSDARG00000015111 11619 2.297 - 0.722 0.836 - - - - 0.739 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
12. rsl24d1 ENSDARG00000040439 13537 2.256 0.800 - - - - - 0.748 - 0.708 ribosomal L24 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1925]
13. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.908 - - - - 0.972 0.936 - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
14. cdc14b ENSDARG00000021483 4958 1.891 - - - 0.998 - - 0.893 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
15. tpd52l2b ENSDARG00000013655 9460 1.891 - - - 0.993 - - 0.898 - - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
16. nmt1a ENSDARG00000052966 5918 1.881 - - - - 0.970 - 0.911 - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
17. ywhah ENSDARG00000005560 11079 1.877 - - - 0.993 - - 0.884 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
18. ckap5 ENSDARG00000102674 5068 1.855 - - - - 0.957 - 0.898 - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
19. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.849 - - - - - 0.927 0.922 - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
20. snx12 ENSDARG00000019060 9563 1.841 - - 0.887 - - 0.954 - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
21. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.836 - - - - - 0.950 0.886 - - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
22. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.836 - - - - - 0.944 0.892 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
23. ubr2 ENSDARG00000070164 3960 1.833 - - - - 0.957 - 0.876 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
24. FAR2 FAR2 1459 1.821 - - - - - 0.930 0.891 - -
25. ctsf ENSDARG00000063095 4564 1.809 - - 0.858 - - 0.951 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
26. pola2 ENSDARG00000015070 2286 1.807 - - 0.811 0.996 - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
27. pes ENSDARG00000018902 3286 1.803 - - - - - 0.928 0.875 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
28. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 1.799 - - 0.847 - - 0.952 - - - adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
29. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.798 - - - 0.985 - - 0.813 - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
30. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 1.795 - - - 0.993 0.802 - - - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
31. ARHGEF5 2727 1.793 - - - - 0.970 0.823 - - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
32. lsm7 ENSDARG00000058328 7191 1.787 - - 0.876 - - - 0.911 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
33. tmpoa ENSDARG00000007315 3638 1.783 0.816 - - - 0.967 - - - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
34. VPS37C ENSDARG00000031836 906 1.781 - - - - - 0.936 0.845 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
35. rbm25 rbm25 3629 1.761 - - 0.797 - 0.964 - - - -
36. CABZ01088039.1 CABZ01088039.1 2482 1.759 - - - - - 0.930 0.829 - -
37. fam89a ENSDARG00000079979 4375 1.758 - 0.799 - - 0.959 - - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
38. txnipa ENSDARG00000036107 8863 1.757 - - - - - 0.970 0.787 - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
39. tob1b ENSDARG00000021372 7048 1.756 - 0.851 - - - 0.905 - - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
40. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.746 0.791 - - - 0.955 - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
41. cand1 ENSDARG00000017841 8164 1.745 - 0.856 0.889 - - - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
42. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.743 - 0.767 - - 0.976 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
43. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.743 - - - - - 0.949 0.794 - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
44. twf1a ENSDARG00000115712 3465 1.742 - - 0.811 - - 0.931 - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
45. gigfy2 3194 1.741 - - 0.841 - - - 0.900 - - GRB10 interacting GYF protein 2, transcript variant X1
46. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.741 - - 0.749 0.992 - - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
47. pdcd6 ENSDARG00000005220 1535 1.739 - 0.827 - - - - 0.912 - - programmed cell death 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1307]
48. C6H2orf40 C6H2orf40 4224 1.737 - - 0.772 - 0.965 - - - -
49. wu:fc51f04 wu:fc51f04 7074 1.737 - - - - - 0.949 0.788 - -
50. amotl2a ENSDARG00000061923 4713 1.729 - 0.780 - - - 0.949 - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
51. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 1.728 - - - - - 0.942 0.786 - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
52. hmgb2b ENSDARG00000053990 11519 1.728 0.771 - - - - 0.957 - - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
53. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.723 - 0.776 - - 0.947 - - - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
54. chd4b ENSDARG00000025789 14299 1.722 - - - - 0.909 - 0.813 - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
55. hnrpdl 14288 1.721 - - - - - 0.915 0.806 - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
56. phb ENSDARG00000057414 9551 1.719 - - 0.773 - - 0.946 - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
57. safb ENSDARG00000020467 5608 1.718 - - 0.828 - - - 0.890 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
58. emc6 ENSDARG00000035282 4981 1.714 - 0.795 - - - - 0.919 - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
59. CABZ01111990.1 CABZ01111990.1 4374 1.708 - - - 0.996 - - - - 0.712
60. zmat5 ENSDARG00000035434 983 1.706 - - 0.777 - - 0.929 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
61. mst4 mst4 1672 1.705 - 0.771 - - - 0.934 - - -
62. eif4a3 ENSDARG00000102978 16162 1.701 - - - - 0.948 - - 0.753 - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
63. cpsf1 ENSDARG00000034178 2036 1.7 - - 0.835 - - - 0.865 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
64. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.699 - 0.815 - - - - 0.884 - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
65. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.695 - - - - 0.962 - - - 0.733 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
66. tcp1 ENSDARG00000017891 7946 1.693 - - - - 0.928 - 0.765 - - t-complex 1 [Source:ZFIN;Acc:ZDB-GENE-990714-24]
67. minos1 ENSDARG00000101619 5273 1.691 - 0.738 - - 0.953 - - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
68. rybpb ENSDARG00000053459 1464 1.69 - - 0.813 - - - 0.877 - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
69. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.689 - 0.760 - - - 0.929 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
70. RANBP3 RANBP3 2513 1.687 - - - - 0.964 - - - 0.723
71. plagx ENSDARG00000036855 3768 1.681 - - - - - 0.945 - - 0.736 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
72. kdelr2a ENSDARG00000005254 13871 1.677 - - - - - 0.874 0.803 - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
73. adpgk2 ENSDARG00000062785 8229 1.676 - - - - 0.949 - 0.727 - - ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
74. znf207a ENSDARG00000015538 2630 1.675 - - - - 0.972 - - - 0.703 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
75. eif3c ENSDARG00000016443 18003 1.674 - - 0.774 - 0.900 - - - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
76. si:ch73-131e21.5 si:ch73-131e21.5 1895 1.673 - 0.704 - - 0.969 - - - -
77. mboat2a ENSDARG00000031845 1255 1.669 - 0.736 - - - 0.933 - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
78. esd ENSDARG00000019496 3192 1.667 - 0.702 - - 0.965 - - - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
79. lsm12b ENSDARG00000109510 14459 1.666 - - 0.793 - - 0.873 - - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
80. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.666 - 0.735 - - 0.931 - - - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
81. clk2a ENSDARG00000062954 1890 1.664 - - 0.792 - - - 0.872 - - CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
82. psmb4 ENSDARG00000054696 8100 1.663 - - - - - 0.963 - - 0.700 proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
83. pcl pcl 2862 1.66 0.737 - - - - 0.923 - - -
84. hadh ENSDARG00000030765 3406 1.654 - 0.741 - - - - 0.913 - - hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]
85. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.652 - - 0.790 - - - 0.862 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
86. khdrbs1b ENSDARG00000070475 18157 1.651 - - - - - 0.942 - 0.709 - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
87. tmem203 ENSDARG00000104996 1182 1.647 0.789 - - - - - 0.858 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
88. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.645 - 0.757 - - - - 0.888 - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
89. evpla ENSDARG00000019808 7565 1.645 - - - - - 0.934 0.711 - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
90. AL844567.1 AL844567.1 1605 1.645 0.781 - - - - - 0.864 - -
91. zc3h18 ENSDARG00000062506 1676 1.645 - - 0.787 - - - 0.858 - - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
92. sf3b4 ENSDARG00000018574 7470 1.641 - - - - - 0.934 0.707 - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
93. KDM6B KDM6B 10265 1.64 - - - - 0.891 - - - 0.749
94. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 1.639 0.810 - 0.829 - - - - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
95. ACTN4_1 ACTN4_1 8550 1.637 - - - - - - 0.802 - 0.835
96. bcat2 ENSDARG00000054849 4317 1.632 - - 0.831 - 0.801 - - - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
97. si:ch211-196l7.4 ENSDARG00000095451 3766 1.631 - 0.701 - - - - 0.930 - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
98. shmt2 ENSDARG00000104414 4276 1.629 0.761 - - - - - 0.868 - - serine hydroxymethyltransferase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-071213-1]
99. uhrf1 ENSDARG00000103409 3282 1.628 - - - - - - 0.885 - 0.743 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
100. rpl5b ENSDARG00000015862, ENSDARG00000109661 79810 1.623 - - - - - 0.888 - - 0.735 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]

There are 1395 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA