Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccrn4la

Gene Name Gene ID Reads Annotation
ccrn4la ccrn4la 843










Genes with expression patterns similar to ccrn4la

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccrn4la ccrn4la 843 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 2.254 0.723 0.794 - - - 0.737 - - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
3. uap1 ENSDARG00000052170 1168 1.651 0.810 - - - - 0.841 - - - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
4. scp2b ENSDARG00000102356 951 1.599 - - - - - 0.770 0.829 - - sterol carrier protein 2b [Source:ZFIN;Acc:ZDB-GENE-041010-196]
5. lgals2b ENSDARG00000038153 2196 1.578 - 0.845 - - - - 0.733 - - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
6. shisa2 856 1.576 - 0.813 - - - - 0.763 - - shisa family member 2, transcript variant X2
7. sp4 ENSDARG00000005186 2904 1.559 - 0.763 - - - - 0.796 - - sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
8. numb ENSDARG00000027279 2905 1.547 - - - - - 0.795 0.752 - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
9. gpr137 ENSDARG00000037244 801 1.542 - - - - - 0.767 0.775 - - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
10. tmprss4a ENSDARG00000103117 841 1.512 - 0.766 - - - 0.746 - - - transmembrane serine protease 4a [Source:ZFIN;Acc:ZDB-GENE-061103-631]
11. TNC ENSDARG00000021948, ENSDARG00000113518 223 1.504 - 0.791 - - - 0.713 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
12. dffa ENSDARG00000055770 294 1.494 - 0.776 - - - 0.718 - - - DNA fragmentation factor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040718-376]
13. epas1a ENSDARG00000008697 3225 1.48 - - - - - 0.729 0.751 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
14. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.477 - 0.722 - - - 0.755 - - - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
15. cfh ENSDARG00000100442, ENSDARG00000109660 2043 1.446 - 0.723 - - - 0.723 - - - complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]
16. mmp13a ENSDARG00000012395, ENSDARG00000114451 178 1.436 - 0.723 - - - 0.713 - - - matrix metallopeptidase 13a [Source:ZFIN;Acc:ZDB-GENE-031202-2]
17. SLC22A31 ENSDARG00000078882 1474 1.434 - 0.706 - - - 0.728 - - - solute carrier family 22, member 31 [Source:ZFIN;Acc:ZDB-GENE-130530-858]
18. CU571162.1 CU571162.1 652 1.431 - 0.726 - - - - 0.705 - -
19. CHDH ENSDARG00000100304 2257 1.427 0.715 - - - - - 0.712 - - choline dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-120111-1]
20. znf395a ENSDARG00000060113 3874 1.421 - - - - - 0.711 0.710 - - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
21. dnase2 ENSDARG00000073893 141 1.402 0.702 - - - - - 0.700 - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
22. vgll4b ENSDARG00000103730 5266 0.914 - - - - - 0.914 - - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
23. CABP7 CABP7 131 0.9 - 0.900 - - - - - - -
24. prkacba ENSDARG00000001782 1340 0.893 - 0.893 - - - - - - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
25. pik3c2a ENSDARG00000060841 785 0.889 - - - - - 0.889 - - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-030328-39]
26. CT573389.2 CT573389.2 1183 0.888 0.888 - - - - - - - -
27. dusp7 ENSDARG00000101413 1307 0.885 - 0.885 - - - - - - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
28. bambib ENSDARG00000099677 4267 0.883 - 0.883 - - - - - - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
29. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.869 - - - - - 0.869 - - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
30. palm3 ENSDARG00000071215 1776 0.865 - 0.865 - - - - - - - paralemmin 3 [Source:ZFIN;Acc:ZDB-GENE-061215-74]
31. si:ch211-191j22.3 ENSDARG00000095459 959 0.864 - 0.864 - - - - - - - si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
32. rgl2 ENSDARG00000007727 1096 0.861 - - - - - 0.861 - - - ral guanine nucleotide dissociation stimulator-like 2 [Source:ZFIN;Acc:ZDB-GENE-010131-1]
33. cramp1l cramp1l 700 0.86 - - - - - - 0.860 - -
34. SEMA4B SEMA4B 1259 0.859 - 0.859 - - - - - - -
35. gbgt1l4 ENSDARG00000068503 1009 0.856 - - - 0.856 - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-031204-4]
36. si:ch73-303g23.4 si:ch73-303g23.4 386 0.856 - 0.856 - - - - - - -
37. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 0.853 - 0.853 - - - - - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
38. herpud2 ENSDARG00000021033 1800 0.846 - - - - - - 0.846 - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
39. TAPT1 TAPT1 1165 0.846 - - - - - - 0.846 - -
40. loxl2b ENSDARG00000044074 1919 0.845 - - - - - 0.845 - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
41. si:dkey-23c22.4 si:dkey-23c22.4 556 0.839 - - - - - 0.839 - - -
42. zgc:85975 4738 0.839 - - - - - 0.839 - - - zgc:85975
43. slc30a5 ENSDARG00000051921 1113 0.839 - 0.839 - - - - - - - solute carrier family 30 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-6]
44. kcnj1a.5 ENSDARG00000089060 617 0.838 - - - - - - 0.838 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-050420-120]
45. sptlc3 ENSDARG00000030743 596 0.837 - 0.837 - - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
46. hagh ENSDARG00000025338 2911 0.835 - 0.835 - - - - - - - hydroxyacylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-8921]
47. psenen ENSDARG00000068698 2777 0.834 - 0.834 - - - - - - - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
48. galnt2 ENSDARG00000003829 891 0.833 - 0.833 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041111-110]
49. csrp2 ENSDARG00000011961 1003 0.833 - 0.833 - - - - - - - cysteine and glycine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1863]
50. nol12 ENSDARG00000038027 2288 0.832 - - - - - 0.832 - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
51. SLC16A13 ENSDARG00000055342 183 0.828 - - - - - 0.828 - - - solute carrier family 16, member 13 (monocarboxylic acid transporter 13) [Source:ZFIN;Acc:ZDB-GENE-120907-2]
52. ACSL1 ACSL1 240 0.827 0.827 - - - - - - - -
53. DENND1A ENSDARG00000014592 436 0.827 0.827 - - - - - - - - DENN/MADD domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060404-6]
54. rbm22 ENSDARG00000010238 523 0.826 0.826 - - - - - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
55. C10H8orf4 C10H8orf4 361 0.826 - - - - - - 0.826 - -
56. osr2 ENSDARG00000038006 360 0.825 - - - - - 0.825 - - - odd-skipped related transciption factor 2 [Source:ZFIN;Acc:ZDB-GENE-050417-183]
57. rock2a ENSDARG00000017500 1277 0.825 - - - - - - 0.825 - - rho-associated, coiled-coil containing protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030115-3]
58. RALGDS RALGDS 992 0.824 - - - - - 0.824 - - -
59. dennd4a ENSDARG00000062721, ENSDARG00000112721 774 0.823 - 0.823 - - - - - - - DENN/MADD domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-060503-285]
60. si:dkey-43b14.6 si:dkey-43b14.6 20 0.823 0.823 - - - - - - - -
61. si:ch211-267e7.2 si:ch211-267e7.2 102 0.822 0.822 - - - - - - - -
62. JAG2 JAG2 427 0.822 - 0.822 - - - - - - -
63. CT583728.14 ENSDARG00000112295 911 0.821 - 0.821 - - - - - - -
64. mmadhc ENSDARG00000005870 1298 0.821 - - - - - 0.821 - - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
65. wnt5b ENSDARG00000102464 1662 0.82 - - - - - 0.820 - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
66. C5H9orf78 C5H9orf78 1550 0.82 - - - - - 0.820 - - -
67. ptprmb ptprmb 1516 0.82 - - - - - - 0.820 - -
68. ppm1h ENSDARG00000063684 1446 0.82 - 0.820 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1H [Source:ZFIN;Acc:ZDB-GENE-061027-190]
69. ubxn1 ENSDARG00000090309 17 0.818 0.818 - - - - - - - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
70. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 0.818 - - - - - 0.818 - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
71. MPRIP ENSDARG00000105209 390 0.818 - - - - - - 0.818 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
72. atp13a2 ENSDARG00000061890, ENSDARG00000117108 294 0.818 - 0.818 - - - - - - - ATPase cation transporting 13A2 [Source:ZFIN;Acc:ZDB-GENE-061215-126]
73. ugt1ab 545 0.817 - - - - - 0.817 - - - UDP glucuronosyltransferase 1 family a, b
74. edem2 ENSDARG00000028448 236 0.814 - 0.814 - - - - - - - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
75. pycr1 pycr1 1258 0.813 - - - - - - 0.813 - -
76. sigirr ENSDARG00000062204 52 0.811 - - - - - - 0.811 - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
77. actr2b ENSDARG00000070076 49 0.81 0.810 - - - - - - - - ARP2 actin related protein 2b homolog [Source:ZFIN;Acc:ZDB-GENE-050410-4]
78. degs1 ENSDARG00000007347 2481 0.809 - - - - - 0.809 - - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
79. eea1 ENSDARG00000062868 1126 0.808 - - - - - 0.808 - - - early endosome antigen 1 [Source:ZFIN;Acc:ZDB-GENE-041111-270]
80. ak3 ENSDARG00000058226 3160 0.808 - - - - - - 0.808 - - adenylate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2142]
81. si:dkey-109j17.4 si:dkey-109j17.4 169 0.807 - - - - - 0.807 - - -
82. zgc:154018 zgc:154018 362 0.807 - - - - - 0.807 - - -
83. otub1b ENSDARG00000011462 4329 0.806 - - - - - 0.806 - - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
84. exosc1 ENSDARG00000059841 6895 0.805 - 0.805 - - - - - - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
85. Sep-10 Sep-10 440 0.804 - 0.804 - - - - - - -
86. FAM107A ENSDARG00000075540 214 0.804 - 0.804 - - - - - - - family with sequence similarity 107 member A [Source:HGNC Symbol;Acc:HGNC:30827]
87. wdr37 ENSDARG00000074611 468 0.804 - - - - - - 0.804 - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
88. ak5l ENSDARG00000017739 1058 0.804 - 0.804 - - - - - - - adenylate kinase 5, like [Source:ZFIN;Acc:ZDB-GENE-050410-2]
89. APOLD1_1 APOLD1_1 590 0.803 - - - - - 0.803 - - -
90. kcnj1a.3 ENSDARG00000086248 398 0.802 - - - - - 0.802 - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050420-256]
91. klf7b ENSDARG00000043821 1061 0.801 - 0.801 - - - - - - - Kruppel-like factor 7b [Source:ZFIN;Acc:ZDB-GENE-041014-171]
92. mgst3 mgst3 3982 0.8 - - - - - 0.800 - - -
93. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 0.799 - - - - - 0.799 - - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
94. txndc17 ENSDARG00000058079 3533 0.798 - - - - - 0.798 - - - thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
95. GGT7 ENSDARG00000115805 481 0.798 - 0.798 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
96. ptges ENSDARG00000020136, ENSDARG00000115727 747 0.798 0.798 - - - - - - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
97. si:dkey-12j5.1 ENSDARG00000089480 3198 0.798 - - - - - 0.798 - - - si:dkey-12j5.1 [Source:ZFIN;Acc:ZDB-GENE-100922-71]
98. atg16l1 ENSDARG00000099430 924 0.797 - - - - - 0.797 - - - ATG16 autophagy related 16-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-401]
99. cdkn1a ENSDARG00000076554 591 0.797 - 0.797 - - - - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
100. etnppl ENSDARG00000035544 440 0.795 - - - - - - 0.795 - - ethanolamine-phosphate phospho-lyase [Source:ZFIN;Acc:ZDB-GENE-040426-1133]

There are 579 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA