Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ccni

Gene Name Gene ID Reads Annotation
ccni ENSDARG00000068214 17558 cyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]










Genes with expression patterns similar to ccni

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccni ENSDARG00000068214 17558 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]
2. rtf1 ENSDARG00000008947 6596 1.686 - - - - 0.739 - 0.947 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
3. SNORD72 SNORD72 4018 1.67 - - - - 0.740 - 0.930 - -
4. ttll4 ENSDARG00000078935 1663 1.645 - - - - 0.700 - 0.945 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
5. tmx2b ENSDARG00000007786 3151 1.623 0.770 - - - - 0.853 - - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
6. thoc2 ENSDARG00000037503 8711 1.581 - 0.741 - - - 0.840 - - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
7. rps16 ENSDARG00000045487 43243 1.555 - 0.724 - - - - 0.831 - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
8. mtss1l mtss1l 2494 1.551 - - - - 0.731 0.820 - - -
9. ywhaba ENSDARG00000013078 42000 1.512 - - - 0.705 - 0.807 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
10. rab5aa ENSDARG00000018602 8947 1.486 - 0.752 - 0.734 - - - - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
11. gltscr2 gltscr2 5763 1.47 - 0.727 - - 0.743 - - - -
12. ywhaqa ENSDARG00000042539 7034 1.452 - 0.735 - - 0.717 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
13. myh10 ENSDARG00000000103 7522 0.982 - - - - - - 0.982 - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
14. eif5a2 ENSDARG00000056186 43804 0.98 - - - - - - 0.980 - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
15. ubc ENSDARG00000102632 36050 0.978 - - - - - - 0.978 - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
16. ostc ENSDARG00000104901 16240 0.968 - - - - - - 0.968 - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
17. ist1 ENSDARG00000051888 4536 0.967 - - - - - - 0.967 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
18. purbb ENSDARG00000103546 4983 0.965 - - - - - - 0.965 - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
19. jagn1b ENSDARG00000014995 2063 0.965 - - - - - - 0.965 - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
20. atp5c1 31368 0.962 - - - - - - 0.962 - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
21. eif4g2b ENSDARG00000057167 22982 0.951 - - - - - 0.951 - - - eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
22. si:ch211-51e12.7 ENSDARG00000045914 9598 0.948 - - - - - - 0.948 - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
23. ptprfb ENSDARG00000005754 7178 0.947 - - - - - - 0.947 - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
24. ncl ENSDARG00000002710 16951 0.947 - - - - - - 0.947 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
25. ABHD12B ABHD12B 1877 0.947 - - - - - - 0.947 - -
26. atp6ap1b ENSDARG00000037153 3970 0.947 - - - - - - 0.947 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
27. slc7a4 ENSDARG00000068286 1693 0.946 - - - - - - 0.946 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
28. lhfpl2b_1 ENSDARG00000098153 1596 0.946 - - - - - - 0.946 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
29. cenpf ENSDARG00000055133 5267 0.946 - - - - - - 0.946 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
30. si:dkey-184p9.7 ENSDARG00000092726 2679 0.946 - - - - - - 0.946 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
31. CCNA2 ENSDARG00000011094 3996 0.946 - - - - - - 0.946 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
32. NDUFB2 ENSDARG00000045490 9141 0.946 - - - - - - 0.946 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
33. pcif1 ENSDARG00000099084 2851 0.946 - - - - - - 0.946 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
34. dct ENSDARG00000006008 2466 0.946 - - - - - - 0.946 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
35. rnd3a ENSDARG00000076799 4705 0.946 - - - - - - 0.946 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
36. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 0.946 - - - - - - 0.946 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
37. hoxc10a ENSDARG00000070348 2323 0.946 - - - - - - 0.946 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
38. fam160a1 fam160a1 1445 0.946 - - - - - - 0.946 - -
39. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.946 - - - - - - 0.946 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
40. CR847934.1 CR847934.1 2658 0.946 - - - - - - 0.946 - -
41. pinx1 ENSDARG00000023532 4452 0.946 - - - - - - 0.946 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
42. alcamb ENSDARG00000058538 5672 0.946 - - - - - - 0.946 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
43. gcn1l1 gcn1l1 6031 0.946 - - - - - - 0.946 - -
44. slc4a2b ENSDARG00000052330 1900 0.946 - - - - - - 0.946 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
45. cx44.1 cx44.1 799 0.945 - - - - - - 0.945 - -
46. oafa ENSDARG00000075851 2015 0.945 - - - - - - 0.945 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
47. lfng ENSDARG00000037879 11783 0.945 - - - - - - 0.945 - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
48. lepre1 lepre1 5346 0.945 - - - - - - 0.945 - -
49. PREX2 ENSDARG00000071692 827 0.945 - - - - - - 0.945 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
50. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 0.945 - - - - - - 0.945 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
51. LMLN ENSDARG00000061265 1618 0.945 - - - - - - 0.945 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
52. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 0.945 - - - - - - 0.945 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
53. TSG101 TSG101 1686 0.945 - - - - - - 0.945 - -
54. pdlim5b ENSDARG00000027600 4252 0.945 - - - - - - 0.945 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
55. SNORD33 SNORD33 3284 0.945 - - - - - - 0.945 - -
56. FAT1 FAT1 689 0.945 - - - - - - 0.945 - -
57. CR388095.3 CR388095.3 2548 0.945 - - - - - - 0.945 - -
58. rfxap ENSDARG00000076891 1299 0.945 - - - - - - 0.945 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
59. plagl2 ENSDARG00000076657 2057 0.945 - - - - - - 0.945 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
60. wwp2 ENSDARG00000061345 3459 0.944 - - - - - - 0.944 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
61. ryr1a ENSDARG00000011422 2377 0.944 - - - - - - 0.944 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
62. aldh7a1 ENSDARG00000018426 4637 0.943 - - - - - - 0.943 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
63. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.943 - - - - - - 0.943 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
64. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.942 - - - - - - 0.942 - -
65. vcl vcl 6667 0.94 - - - - - - 0.940 - -
66. atp5h 18018 0.937 - - - - - - 0.937 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
67. marcksl1a ENSDARG00000039034 37303 0.937 - - - - - - 0.937 - - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
68. sgms1 ENSDARG00000029621 6376 0.934 - - - - - - 0.934 - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
69. si:ch211-160e1.5 5586 0.933 - - - - - - 0.933 - - si:ch211-160e1.5
70. arf2 arf2 12369 0.912 - - - - - 0.912 - - -
71. ca2 ENSDARG00000014488 10141 0.91 - - - - - 0.910 - - - carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]
72. capns1a ENSDARG00000035329 10870 0.908 - - - - - - 0.908 - - calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
73. cbsb ENSDARG00000010946 5779 0.907 - 0.907 - - - - - - - cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
74. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 0.907 - 0.907 - - - - - - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
75. cdx4 ENSDARG00000036292 1225 0.897 - 0.897 - - - - - - - caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
76. suclg1 ENSDARG00000052712 17570 0.893 - - - - - 0.893 - - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
77. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 0.892 - - - - - 0.892 - - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
78. UBE2D2 ENSDARG00000043484 11723 0.892 - 0.892 - - - - - - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-120312-1]
79. tmod4 ENSDARG00000020890 17436 0.884 - - - - - - 0.884 - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
80. glula ENSDARG00000099776 14156 0.883 - - - - - 0.883 - - - glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
81. CU914813.1 CU914813.1 29656 0.882 - - - - - - 0.882 - -
82. hbbe1.1 ENSDARG00000113599 64815 0.879 - - - - - - 0.879 - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
83. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 0.876 - - - - - 0.876 - - - si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
84. srsf11 ENSDARG00000098574 12801 0.876 - - - - - 0.876 - - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
85. sub1a ENSDARG00000053446 13383 0.874 - 0.874 - - - - - - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
86. HNRNPA2B1 HNRNPA2B1 14997 0.874 - - - - - 0.874 - - -
87. kpnb1 ENSDARG00000104889 9282 0.87 - - - - - 0.870 - - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
88. irf2bp2a ENSDARG00000004702 6719 0.868 - - - - - 0.868 - - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
89. tmed2 ENSDARG00000026908 9070 0.868 - - - - - 0.868 - - - transmembrane p24 trafficking protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-269]
90. si:dkeyp-44a8.2 ENSDARG00000092493 8308 0.867 - - - - - 0.867 - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
91. eif3f ENSDARG00000077533 24387 0.866 - - - - - 0.866 - - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
92. tmed9 ENSDARG00000004261 10013 0.865 - - - - - 0.865 - - - transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
93. chpt1 ENSDARG00000014572 2926 0.865 - - - - - 0.865 - - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
94. cebpb ENSDARG00000042725 3921 0.864 - - - - - 0.864 - - - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
95. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 0.864 - - - - - 0.864 - - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
96. FP067396.1 FP067396.1 32149 0.861 - - - - - - 0.861 - -
97. rps27.1 ENSDARG00000023298 86382 0.86 - - - - - - 0.860 - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
98. clint1a ENSDARG00000025535 4965 0.857 - - - - - 0.857 - - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
99. NDNF ENSDARG00000062936 7287 0.856 - - - - - 0.856 - - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
100. syne2b ENSDARG00000053484 9225 0.855 - - - - - 0.855 - - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]

There are 415 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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