Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccnf

Gene Name Gene ID Reads Annotation
ccnf ENSDARG00000105046 1790 cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]










Genes with expression patterns similar to ccnf

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccnf ENSDARG00000105046 1790 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
2. wdr59 ENSDARG00000088817 1005 2.549 - 0.883 - - 0.810 - - 0.856 - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
3. ift172 ENSDARG00000041870 1239 2.425 - 0.798 - - - - 0.715 0.912 - intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
4. dut ENSDARG00000106529 3120 2.333 - 0.710 - - 0.880 0.743 - - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
5. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 2.188 0.723 - - - - 0.751 - - 0.714 progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
6. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.166 - 0.716 - - 0.728 - - - 0.722 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
7. ube2t ENSDARG00000063285 716 1.719 - 0.883 - - 0.836 - - - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
8. FP102801.1_1 FP102801.1_1 238 1.709 - 0.787 - - - - - 0.922 -
9. ZNF337_25 ZNF337_25 1713 1.701 - - - - 0.818 - - 0.883 -
10. C8H5orf51 C8H5orf51 1199 1.682 - - - - 0.830 - - 0.852 -
11. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.68 - 0.903 - - 0.777 - - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
12. tmem141 ENSDARG00000101963 513 1.677 - - - - - 0.743 - 0.934 - transmembrane protein 141 [Source:ZFIN;Acc:ZDB-GENE-060929-272]
13. si:ch211-278j3.3 ENSDARG00000020284 478 1.674 - 0.902 - - 0.772 - - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
14. sin3ab ENSDARG00000059812 2140 1.663 - 0.827 - - 0.836 - - - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
15. mtss1l mtss1l 2494 1.656 - 0.871 - - 0.785 - - - -
16. med14 ENSDARG00000009953 1383 1.65 - 0.917 - - - - - - 0.733 mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
17. fmnl3 ENSDARG00000004372 821 1.649 - - - - 0.753 - - 0.896 - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
18. papolg ENSDARG00000012141 1445 1.643 - - - - 0.857 - - - 0.786 poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
19. rpa3 ENSDARG00000002613 2923 1.64 - - - - 0.874 - - - 0.766 replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
20. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1.631 - - - - - 0.729 - 0.902 - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
21. nudt2 ENSDARG00000058728 371 1.631 - - - - 0.739 - - 0.892 - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
22. manea ENSDARG00000001898 450 1.618 - - - - - 0.709 - 0.909 - mannosidase, endo-alpha [Source:ZFIN;Acc:ZDB-GENE-040912-87]
23. kif19 ENSDARG00000053026 124 1.601 - 0.780 - - - - - 0.821 - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
24. strada ENSDARG00000037929 1614 1.599 - - - - 0.843 - 0.756 - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
25. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 1.598 - 0.714 - - - - - 0.884 - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
26. ralgps2 ENSDARG00000026519 1610 1.598 - 0.836 - - - 0.762 - - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
27. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 1.588 - - - - 0.840 - 0.748 - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
28. znf511 ENSDARG00000000760 446 1.587 - 0.803 - - 0.784 - - - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
29. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.587 - 0.734 - - 0.853 - - - - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
30. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.581 - - - - - - - 0.876 0.705 DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
31. wbp2 ENSDARG00000056605 101 1.573 - 0.848 - - - 0.725 - - - WW domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-137]
32. tmem168a ENSDARG00000068705 498 1.57 - - - - - 0.788 - 0.782 - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
33. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.569 - - - - 0.826 - 0.743 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
34. trim71 ENSDARG00000075593 2750 1.567 - 0.725 - - - - 0.842 - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
35. ttc3 ENSDARG00000086075 2157 1.563 - - - - 0.808 - - 0.755 - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
36. si:ch211-9d9.1 ENSDARG00000099839 75 1.561 - 0.851 - - - 0.710 - - - si:ch211-9d9.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2657]
37. mrpl3 ENSDARG00000103318 2308 1.555 - - - - - - 0.710 0.845 - mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
38. prdm1a ENSDARG00000002445 1340 1.554 - 0.763 - - - 0.791 - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
39. vangl2 ENSDARG00000027397 2418 1.545 - - - - - - 0.789 - 0.756 VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
40. ogfr ENSDARG00000037837 1001 1.544 - - - - 0.839 - - - 0.705 opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
41. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.544 - - - - 0.797 - 0.747 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
42. rab6bb ENSDARG00000031343 1381 1.544 - 0.824 - - - - - 0.720 - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
43. paf1 ENSDARG00000098432 1806 1.541 - - - 0.770 0.771 - - - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
44. CABZ01068153.1 CABZ01068153.1 211 1.54 - 0.830 - - - 0.710 - - -
45. gnai1 ENSDARG00000021647 1548 1.539 - - - - - 0.770 0.769 - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1310]
46. si:ch211-281g2.4 si:ch211-281g2.4 121 1.538 - - - - - 0.711 - 0.827 -
47. si:dkeyp-55f12.3 ENSDARG00000042345 1812 1.537 - 0.791 - - - 0.746 - - - si:dkeyp-55f12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-118]
48. MSL1_1 MSL1_1 2365 1.529 - - - - 0.824 - 0.705 - -
49. BDP1_1 BDP1_1 317 1.528 - 0.824 - - - - - - 0.704
50. scaf4a ENSDARG00000077093 2408 1.525 - - - - 0.779 - 0.746 - - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
51. cdc20 ENSDARG00000100741 3264 1.523 - - - - 0.791 - 0.732 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
52. plekhj1 ENSDARG00000025593 696 1.523 - 0.782 - - 0.741 - - - - pleckstrin homology domain containing, family J member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2480]
53. ppig ENSDARG00000044431 3427 1.523 - - - - 0.818 - 0.705 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
54. RPS6KC1 ENSDARG00000104103 746 1.522 - 0.804 - - - 0.718 - - - ribosomal protein S6 kinase polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-081031-83]
55. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.52 - - - - 0.805 - 0.715 - - hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
56. vamp1 ENSDARG00000031283 3094 1.518 - 0.734 - - - - - 0.784 - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
57. gfra2a ENSDARG00000042723 592 1.517 - 0.744 - - - - - 0.773 - GDNF family receptor alpha 2a [Source:ZFIN;Acc:ZDB-GENE-040630-1]
58. BX323459.1 ENSDARG00000109508 1476 1.517 - - - - 0.798 - - 0.719 -
59. MBTD1 ENSDARG00000060868 783 1.515 - 0.737 - - - - - 0.778 - mbt domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-138]
60. C2H14orf119 C2H14orf119 716 1.514 - - - - 0.753 0.761 - - -
61. ppil1 ENSDARG00000015422 1353 1.514 - - - 0.703 - - - 0.811 - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:ZFIN;Acc:ZDB-GENE-051009-1]
62. lbr ENSDARG00000014013 4835 1.512 - - - 0.789 - - 0.723 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
63. ptp4a2 ptp4a2 3196 1.511 - - - - - - - 0.719 0.792
64. u2af1 ENSDARG00000015325 3217 1.498 - - 0.719 - 0.779 - - - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
65. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 1.497 - - - - 0.758 - - - 0.739 tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
66. neurl4 ENSDARG00000078127, ENSDARG00000116566 334 1.493 - 0.736 - - - 0.757 - - - neuralized E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-100318-4]
67. apaf1 ENSDARG00000021239 1185 1.493 - - - - 0.705 - - 0.788 - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
68. LMAN2L LMAN2L 555 1.493 - - - - 0.720 0.773 - - -
69. zgc:113443 359 1.487 - 0.708 - - - 0.779 - - - zgc:113443, transcript variant X3
70. sf1 ENSDARG00000008188 5142 1.484 - - - 0.738 - - 0.746 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
71. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.478 - - - - - - 0.778 - 0.700 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
72. CABZ01087568.1 CABZ01087568.1 1487 1.476 - 0.758 - - 0.718 - - - -
73. WDR61 ENSDARG00000007755 2827 1.473 - - - - - - 0.761 - 0.712 WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
74. LPHN2 LPHN2 1971 1.469 - - - - 0.712 - 0.757 - -
75. leo1 ENSDARG00000055357 1644 1.468 - - - - 0.764 - 0.704 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
76. lgi2a ENSDARG00000111069 965 1.466 - - - - 0.735 - - 0.731 - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
77. tgif1 ENSDARG00000059337 4020 1.46 - - 0.724 - - - - - 0.736 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
78. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.458 - - - - - - 0.710 0.748 -
79. kif15 ENSDARG00000012073 1936 1.453 - - - 0.716 - - 0.737 - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
80. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.451 0.707 - - - 0.744 - - - - actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
81. FP102311.1 FP102311.1 118 1.45 - 0.729 - - - 0.721 - - -
82. PATZ1 ENSDARG00000076584 1116 1.45 - - - - - - 0.701 0.749 - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
83. MAL_1 MAL_1 200 1.448 - 0.742 - - - 0.706 - - -
84. Sep-07 Sep-07 1827 1.448 - - - - - - 0.726 0.722 -
85. pex13 ENSDARG00000071037 738 1.443 - - - - - - 0.726 0.717 - peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
86. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 1.44 0.700 - - - - - - 0.740 - zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
87. axin1 ENSDARG00000102964 1710 1.44 - - - - - 0.713 0.727 - - axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
88. si:dkey-92i17.2 ENSDARG00000093612 707 1.436 - 0.734 - - - - 0.702 - - si:dkey-92i17.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6759]
89. kpna2 ENSDARG00000038066 7954 1.427 - - - - 0.706 - - - 0.721 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
90. scaf1 ENSDARG00000054010 3752 1.425 - - - - - - 0.713 - 0.712 SR-related CTD-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-120215-214]
91. arl13b ENSDARG00000012763 458 0.941 - - - - - - - 0.941 - ADP-ribosylation factor-like 13b [Source:ZFIN;Acc:ZDB-GENE-021217-3]
92. ndc80 ENSDARG00000071694 1162 0.94 - - - - - - - 0.940 - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
93. pnp5b ENSDARG00000099802 551 0.934 - - - - - - - 0.934 - purine nucleoside phosphorylase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-54]
94. tvp23b ENSDARG00000057060 361 0.934 - - - - - - - 0.934 - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
95. decr2 ENSDARG00000045257 603 0.934 - - - - - - - 0.934 - 2,4-dienoyl CoA reductase 2, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-040426-2612]
96. srrm2 ENSDARG00000037965 1967 0.933 - - - - - - - 0.933 - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
97. CABZ01067945.1 CABZ01067945.1 469 0.931 - - - - - - - 0.931 -
98. rgs20 ENSDARG00000038859 331 0.931 - - - - - - - 0.931 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
99. pak1ip1 ENSDARG00000044488 1995 0.931 - - - - - - - 0.931 - PAK1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8414]
100. megf8_1 ENSDARG00000079751, ENSDARG00000103934 722 0.93 - - - - - - - 0.930 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]

There are 1530 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA