Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccnd1

Gene Name Gene ID Reads Annotation
ccnd1 ENSDARG00000101637 34762 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]










Genes with expression patterns similar to ccnd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccnd1 ENSDARG00000101637 34762 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
2. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.412 0.708 0.785 - - - 0.919 - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
3. rab10 ENSDARG00000046106 15618 1.803 - - - - - 0.942 0.861 - - RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
4. gapdhs ENSDARG00000039914 8760 1.787 - - - - - 0.991 0.796 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
5. flna ENSDARG00000074201 26242 1.785 - - 0.899 - - 0.886 - - - filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
6. zgc:158409 zgc:158409 21963 1.751 - - - - 0.941 - 0.810 - -
7. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.749 - - - - - 0.902 0.847 - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
8. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.735 - 0.792 - - 0.943 - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
9. rbb4 rbb4 15541 1.731 - 0.787 - - 0.944 - - - -
10. cdkn1c cdkn1c 17427 1.725 - - - - - 0.866 - 0.859 -
11. nhsl1b ENSDARG00000042627 3697 1.722 - - - - - 0.935 0.787 - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
12. mgea5 6076 1.709 - 0.787 - - - 0.922 - - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X2
13. fam3c ENSDARG00000056152 3833 1.704 - - - - - 0.933 0.771 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
14. tgfbi ENSDARG00000071586 17779 1.698 - 0.782 - - - - - - 0.916 transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
15. pacsin3 ENSDARG00000099339 4668 1.698 - - - - - 0.927 0.771 - - protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]
16. mcm2 ENSDARG00000102798 8148 1.697 0.762 - - - - 0.935 - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
17. LRP10 ENSDARG00000054539 1895 1.696 - - - - - 0.937 0.759 - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
18. alpi.1 ENSDARG00000015273 1712 1.685 - - - - - 0.935 0.750 - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
19. txndc5 ENSDARG00000009342 5387 1.664 - - - 0.736 - 0.928 - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
20. anp32e ENSDARG00000054804 11017 1.664 - - - - - 0.944 - 0.720 - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
21. dhx15 ENSDARG00000015392 7496 1.653 - 0.795 - - - - 0.858 - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
22. znf706 ENSDARG00000056307 12518 1.646 0.713 - - - 0.933 - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
23. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.642 0.721 - - - - - 0.921 - - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
24. mrps24 ENSDARG00000100116 1750 1.64 0.705 - - - - 0.935 - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
25. lsm4 ENSDARG00000023852 6083 1.623 0.741 - - - - - 0.882 - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
26. cstf3 ENSDARG00000018904 6111 1.619 - 0.785 - - - - 0.834 - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
27. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.609 - - 0.806 - - - - 0.803 - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
28. rbm4.3 ENSDARG00000022129 28571 1.608 - 0.832 - 0.776 - - - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
29. rpl24 ENSDARG00000099104 65580 1.606 0.750 - - 0.856 - - - - - ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
30. cnbpa ENSDARG00000045776 8648 1.599 - 0.742 - - - - 0.857 - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
31. chac1 ENSDARG00000070426 17552 1.596 - 0.712 - - - 0.884 - - - ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
32. tomm7 ENSDARG00000067717 4452 1.583 - 0.785 - - - - 0.798 - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
33. igf2bp1 ENSDARG00000061478 22924 1.583 - - - - - - 0.850 0.733 - insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
34. eif2s3 ENSDARG00000008292 17051 1.565 - - - 0.704 - - 0.861 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
35. tuba1c ENSDARG00000055216 8384 1.553 - 0.788 - 0.765 - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
36. zgc:100919 zgc:100919 7746 1.55 - - - 0.740 - - 0.810 - -
37. oaz1a ENSDARG00000071403 21112 1.53 0.715 - - - - 0.815 - - - ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
38. id2a ENSDARG00000055283 7428 1.527 - 0.722 - - - - 0.805 - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
39. atp5f1 16797 1.506 - 0.792 - - - - 0.714 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
40. mpi ENSDARG00000030786 3052 1.493 - - - 0.741 - - 0.752 - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
41. dcxr ENSDARG00000079271 3289 1.491 - 0.755 - 0.736 - - - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
42. zgc:56493 ENSDARG00000031435 33407 1.47 - - - 0.741 - - - 0.729 - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
43. uqcrh ENSDARG00000059128 30831 1.46 - - - - - 0.738 0.722 - - ubiquinol-cytochrome c reductase hinge protein [Source:ZFIN;Acc:ZDB-GENE-051030-93]
44. ywhabb ENSDARG00000075758 23104 1.415 - - 0.702 0.713 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
45. gpia ENSDARG00000012987 4624 0.971 - 0.971 - - - - - - - glucose-6-phosphate isomerase a [Source:ZFIN;Acc:ZDB-GENE-020513-2]
46. tgfbr1a ENSDARG00000017494 1458 0.963 - 0.963 - - - - - - - transforming growth factor, beta receptor 1 a [Source:ZFIN;Acc:ZDB-GENE-051120-75]
47. COL2A1 COL2A1 18161 0.962 - - - - - 0.962 - - -
48. vps35 ENSDARG00000008224 13245 0.962 - - - - 0.962 - - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
49. ZPLXDC2 ZPLXDC2 1298 0.96 - 0.960 - - - - - - -
50. anp32b ENSDARG00000023330 25013 0.955 - - - - 0.955 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
51. hmox1 hmox1 1391 0.955 - 0.955 - - - - - - -
52. sap130a ENSDARG00000056924 3156 0.95 - - - - 0.950 - - - - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
53. hexim1 ENSDARG00000036482 4317 0.949 - - - - - 0.949 - - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
54. cdv3 ENSDARG00000023028 12380 0.949 - - - - - 0.949 - - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
55. fndc3bb ENSDARG00000062023 1502 0.945 - - - - - 0.945 - - - fibronectin type III domain containing 3Bb [Source:ZFIN;Acc:ZDB-GENE-070510-2]
56. phgdh ENSDARG00000001873 8325 0.945 - - - - 0.945 - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
57. ncalda ENSDARG00000070688 5069 0.944 - - - - 0.944 - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
58. b4galt4 ENSDARG00000104042 1479 0.944 - - - - - 0.944 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-041114-103]
59. C25H1orf51 C25H1orf51 2460 0.944 - - - - 0.944 - - - -
60. six3b ENSDARG00000054879 2416 0.944 - - - - 0.944 - - - - SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
61. sh3kbp1 ENSDARG00000075853 2838 0.944 - - - - 0.944 - - - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
62. acyp1 ENSDARG00000060126 2161 0.944 - - - - 0.944 - - - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
63. si:dkey-191j3.3 si:dkey-191j3.3 1987 0.944 - - - - 0.944 - - - -
64. pcgf6 ENSDARG00000069681 2382 0.944 - - - - 0.944 - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
65. nrp2a_1 ENSDARG00000096546 3358 0.944 - - - - 0.944 - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
66. ptprnb ENSDARG00000077047 2743 0.943 - - - - 0.943 - - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
67. mrps25 ENSDARG00000041306 3654 0.943 - - - - 0.943 - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
68. nip7 ENSDARG00000059075 3964 0.943 - - - - 0.943 - - - - NIP7, nucleolar pre-rRNA processing protein [Source:ZFIN;Acc:ZDB-GENE-050522-256]
69. snap25a ENSDARG00000020609 4537 0.943 - - - - 0.943 - - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
70. taf9 ENSDARG00000077870 6992 0.943 - - - - 0.943 - - - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
71. ppp5c ENSDARG00000034313 8794 0.941 - - - - 0.941 - - - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
72. furina ENSDARG00000062909, ENSDARG00000117158 6313 0.94 - - - - 0.940 - - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
73. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 0.94 - - - - 0.940 - - - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
74. FOXK2 ENSDARG00000030583 5500 0.939 - - - - 0.939 - - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
75. tegt ENSDARG00000077934 27182 0.937 - - - - 0.937 - - - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
76. myo5b ENSDARG00000062003 653 0.937 - - - - - 0.937 - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
77. gopc ENSDARG00000023117 1206 0.937 - - - - - 0.937 - - - golgi-associated PDZ and coiled-coil motif containing [Source:ZFIN;Acc:ZDB-GENE-030131-5086]
78. MTMR11 ENSDARG00000069755 917 0.937 - - - - - 0.937 - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
79. UNCX ENSDARG00000102976 847 0.937 - - - - - 0.937 - - - UNC homeobox [Source:ZFIN;Acc:ZDB-GENE-080509-1]
80. hoxb1a ENSDARG00000008174 462 0.937 - - - - - 0.937 - - - homeobox B1a [Source:ZFIN;Acc:ZDB-GENE-990415-101]
81. olfml2bb ENSDARG00000021480 256 0.937 - - - - - 0.937 - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
82. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.937 - - - - - 0.937 - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
83. icln icln 1279 0.937 - - - - - 0.937 - - -
84. tpd52l2a ENSDARG00000027154 4359 0.937 - - - - - 0.937 - - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
85. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 0.937 - - - - - 0.937 - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
86. nuf2 ENSDARG00000034624 2252 0.937 - - - - - 0.937 - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
87. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 0.937 - - - - - 0.937 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
88. si:dkeyp-27e10.3 ENSDARG00000063008 369 0.937 - - - - - 0.937 - - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
89. arl8ba ENSDARG00000006915 720 0.937 - - - - - 0.937 - - - ADP-ribosylation factor-like 8Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9370]
90. nudcd2 ENSDARG00000078059, ENSDARG00000109490 2234 0.937 - - - - - 0.937 - - - NudC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-49]
91. capns1b ENSDARG00000013804 37726 0.937 - - - - 0.937 - - - - calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
92. thoc1 ENSDARG00000088246 1718 0.937 - - - - - 0.937 - - - THO complex 1 [Source:ZFIN;Acc:ZDB-GENE-030826-9]
93. fam50a ENSDARG00000024895 3020 0.937 - - - - - 0.937 - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
94. sart3 ENSDARG00000008032 2594 0.937 - - - - - 0.937 - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
95. zcchc7 ENSDARG00000055443 2159 0.937 - - - - - 0.937 - - - zinc finger, CCHC domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030102-2]
96. flcn ENSDARG00000062385, ENSDARG00000116055 614 0.937 - - - - - 0.937 - - - folliculin [Source:ZFIN;Acc:ZDB-GENE-060421-3470]
97. cited2 ENSDARG00000030905 1319 0.936 - - - - - 0.936 - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 [Source:ZFIN;Acc:ZDB-GENE-041010-141]
98. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 0.936 - - - - - 0.936 - - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
99. SPIN4_1 SPIN4_1 2562 0.936 - - - - - 0.936 - - -
100. ARHGAP35 2409 0.936 - - - - - 0.936 - - - Rho GTPase activating protein 35b, transcript variant X2

There are 670 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA