Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc90b

Gene Name Gene ID Reads Annotation
ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]










Genes with expression patterns similar to ccdc90b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
2. pfas ENSDARG00000003750 296 2.564 0.857 0.860 - - - 0.847 - - - phosphoribosylformylglycinamidine synthase [Source:ZFIN;Acc:ZDB-GENE-030131-4420]
3. asap2b ENSDARG00000019564 1660 2.447 - - - - - 0.765 - 0.721 0.961 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
4. zgc:136439 ENSDARG00000009267 720 2.424 0.717 - - - - - 0.720 - 0.987 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
5. si:dkey-30c15.13 ENSDARG00000069524, ENSDARG00000114258 403 2.405 - 0.829 - - - 0.859 0.717 - - si:dkey-30c15.13 [Source:ZFIN;Acc:ZDB-GENE-060503-73]
6. atp2b1a ENSDARG00000012684 4673 2.238 - 0.701 - - - 0.801 0.736 - - ATPase plasma membrane Ca2+ transporting 1a [Source:ZFIN;Acc:ZDB-GENE-030925-29]
7. atp6ap1b ENSDARG00000037153 3970 1.809 - - - - - 0.883 - - 0.926 ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
8. mmp9 ENSDARG00000042816 298 1.77 - - - - - - 0.788 - 0.982 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
9. arhgap5 ENSDARG00000061294 2228 1.762 - - - - - - 0.820 - 0.942 Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
10. daam1a ENSDARG00000015059 1460 1.76 - 0.796 - - - - - - 0.964 dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
11. tnfaip8l2b ENSDARG00000046148 1133 1.753 - - - 0.833 - - - - 0.920 tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
12. phactr4a ENSDARG00000015552 1315 1.743 - - - - - - 0.752 - 0.991 phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
13. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 1.743 - - - - - - 0.767 - 0.976 bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
14. ssh2b ENSDARG00000098955 614 1.738 - - - - - 0.764 - - 0.974 slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
15. coro2a ENSDARG00000005210 1479 1.729 - - - - - 0.791 - - 0.938 coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
16. panx1a ENSDARG00000025285 352 1.727 - 0.737 - - - - - - 0.990 pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
17. TSC22D1 ENSDARG00000038306 517 1.727 - - - - - 0.749 - - 0.978 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
18. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 1.726 - 0.741 - - - - - - 0.985 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
19. si:dkey-221j11.3 ENSDARG00000093304 1001 1.724 - - - - - - - 0.763 0.961 si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
20. RNF5 ENSDARG00000075606 1730 1.718 - - - - - - 0.734 - 0.984 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
21. atp2a3 ENSDARG00000060978 1408 1.717 - 0.759 - - - - - - 0.958 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
22. sar1b ENSDARG00000103403 1699 1.716 - - - - - - 0.737 - 0.979 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
23. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.716 - - - - - - 0.765 - 0.951 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
24. frem1a ENSDARG00000069473 1847 1.714 0.843 - - - - - - - 0.871 Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
25. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.711 - - - - - - - 0.731 0.980 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
26. plcd1b ENSDARG00000034080 4074 1.71 - 0.868 - - - - - - 0.842 phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
27. SVIL SVIL 2589 1.709 - - - - - - 0.805 - 0.904
28. ube3b ENSDARG00000061960 978 1.704 - - - - - - 0.745 - 0.959 ubiquitin protein ligase E3B [Source:ZFIN;Acc:ZDB-GENE-060526-231]
29. CARD11 ENSDARG00000052741 249 1.7 - - - - - - 0.726 - 0.974 caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
30. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.69 - - - - - - 0.827 0.863 - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
31. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 1.687 - - - - - - 0.870 - 0.817 epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
32. slc16a12b ENSDARG00000089885 3744 1.679 - 0.789 - - - - - - 0.890 solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
33. SHKBP1 ENSDARG00000105050 1139 1.673 - - - - - 0.850 0.823 - - SH3KBP1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19214]
34. fgf8a ENSDARG00000003399 580 1.671 - - - - - 0.700 - - 0.971 fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
35. OTTDARG00000032278 OTTDARG00000032278 1016 1.666 - - - - - - 0.714 - 0.952
36. AIM1L AIM1L 899 1.662 - 0.891 - - - - 0.771 - -
37. trim35-28 ENSDARG00000021021 1380 1.661 0.717 - - - - - - - 0.944 tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
38. nme3 ENSDARG00000100990 3889 1.655 - - - - - 0.789 - - 0.866 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
39. btr02 ENSDARG00000052215 401 1.644 - 0.811 - - - 0.833 - - - bloodthirsty-related gene family, member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-228]
40. itgbl1 ENSDARG00000040985 705 1.644 - - - 0.810 - - - - 0.834 integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
41. ryroxd1 227 1.644 0.938 - - - - - 0.706 - - pyridine nucleotide-disulphide oxidoreductase domain 1, transcript variant X1
42. cmbl ENSDARG00000073786 456 1.641 - 0.784 - - - 0.857 - - - carboxymethylenebutenolidase homolog (Pseudomonas) [Source:ZFIN;Acc:ZDB-GENE-071004-21]
43. bmp2a ENSDARG00000013409 303 1.638 0.892 - - - - - 0.746 - - bone morphogenetic protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-388]
44. bdh1 ENSDARG00000059388 3390 1.637 - 0.868 - - - - 0.769 - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
45. myrf ENSDARG00000078676 614 1.636 - 0.896 - - - 0.740 - - - myelin regulatory factor [Source:ZFIN;Acc:ZDB-GENE-080204-57]
46. gstal gstal 1865 1.626 - 0.879 - - - 0.747 - - -
47. cldnb ENSDARG00000009544 6036 1.625 - - - - - - 0.748 - 0.877 claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
48. TARS2 76 1.623 0.900 - - - - - 0.723 - - threonyl-tRNA synthetase 2, mitochondrial (putative), transcript variant X2
49. sh3gl3a ENSDARG00000013360 3602 1.617 - 0.831 - - - - - - 0.786 SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
50. SLC27A2_1 SLC27A2_1 974 1.614 - 0.846 - - - 0.768 - - -
51. ensaa ENSDARG00000036944 685 1.609 - 0.774 - 0.835 - - - - - endosulfine alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-181]
52. arl6ip5b ENSDARG00000016238 1622 1.607 - 0.713 - - - - - - 0.894 ADP-ribosylation factor-like 6 interacting protein 5b [Source:ZFIN;Acc:ZDB-GENE-040718-223]
53. arf6b ENSDARG00000052928 4585 1.602 - - - - - 0.716 - - 0.886 ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
54. zgc:56585 ENSDARG00000026236 704 1.602 - - - 0.830 - - - 0.772 - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
55. AL929434.1 AL929434.1 3294 1.6 0.780 - - - - - 0.820 - -
56. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 1.596 - - - 0.795 - - 0.801 - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
57. lrba ENSDARG00000031108 2136 1.595 - 0.716 - - - - - - 0.879 LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
58. RPRD1A ENSDARG00000104861 2560 1.576 - - - - - - 0.782 - 0.794 regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
59. si:dkey-95p16.2 ENSDARG00000093484 3413 1.573 - - - - - 0.809 0.764 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
60. kctd15a ENSDARG00000045893 1272 1.573 0.856 - - - - - 0.717 - - potassium channel tetramerization domain containing 15a [Source:ZFIN;Acc:ZDB-GENE-041010-105]
61. si:dkey-192g7.3 ENSDARG00000094012 105 1.57 - - - 0.813 - 0.757 - - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
62. FOXO1 FOXO1 85 1.569 - 0.741 - - - 0.828 - - -
63. LPHN2 LPHN2 1971 1.566 - - - - - 0.738 0.828 - -
64. CT573468.1 CT573468.1 283 1.566 - - - 0.831 - - - 0.735 -
65. slc44a2 ENSDARG00000037059 1903 1.564 - 0.774 - - - - 0.790 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
66. krt17 ENSDARG00000094041 7683 1.563 - - - - - - 0.800 - 0.763 keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
67. mbpb ENSDARG00000089413 3334 1.556 - - - 0.715 - - - 0.841 - myelin basic protein b [Source:ZFIN;Acc:ZDB-GENE-030429-21]
68. pof1b ENSDARG00000054060 2355 1.556 - 0.809 - - - 0.747 - - - POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
69. LIMD2 ENSDARG00000078092 3414 1.554 - - - - - 0.759 0.795 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
70. lypd6 ENSDARG00000004307 233 1.553 - - - 0.790 - 0.763 - - - LY6/PLAUR domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040912-117]
71. APOB_1 APOB_1 2217 1.547 - 0.768 - - - 0.779 - - -
72. zbtb8os ENSDARG00000016368 284 1.545 - - - 0.793 - - - 0.752 - zinc finger and BTB domain containing 8 opposite strand [Source:ZFIN;Acc:ZDB-GENE-050417-176]
73. si:dkey-102c8.3 ENSDARG00000113572 4779 1.545 - - - - - 0.747 0.798 - - si:dkey-102c8.3 [Source:ZFIN;Acc:ZDB-GENE-050208-328]
74. arrdc1b ENSDARG00000079839 236 1.544 - 0.796 - - - 0.748 - - - arrestin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080515-2]
75. rabl3 ENSDARG00000040959 271 1.542 - 0.821 - - - - 0.721 - - RAB, member of RAS oncogene family-like 3 [Source:ZFIN;Acc:ZDB-GENE-040808-11]
76. SLC22A31 ENSDARG00000078882 1474 1.538 - 0.711 - - - 0.827 - - - solute carrier family 22, member 31 [Source:ZFIN;Acc:ZDB-GENE-130530-858]
77. plekha8 ENSDARG00000040698 431 1.534 - 0.787 - - - - 0.747 - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 [Source:ZFIN;Acc:ZDB-GENE-041114-69]
78. msxd msxd 1750 1.533 0.754 - - 0.779 - - - - -
79. ca8 ENSDARG00000039098 401 1.533 - 0.726 - 0.807 - - - - - carbonic anhydrase VIII [Source:ZFIN;Acc:ZDB-GENE-050417-26]
80. rac2 ENSDARG00000038010 5837 1.531 0.717 - - - - - 0.814 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
81. PLEKHG3 72 1.53 0.721 0.809 - - - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
82. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.53 - - - - - 0.805 - 0.725 - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
83. SLC12A7 SLC12A7 1702 1.53 - - - - - 0.723 0.807 - -
84. zgc:110333 ENSDARG00000040628 3250 1.529 - - - - - - 0.730 0.799 - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
85. ssu72 ENSDARG00000031216 2350 1.526 - 0.786 - - - - 0.740 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
86. zgc:154018 zgc:154018 362 1.525 - 0.782 - - - 0.743 - - -
87. anxa2a ENSDARG00000003216 10684 1.524 - 0.773 - - - - - - 0.751 annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
88. exoc7 ENSDARG00000087229 987 1.522 - 0.790 - - - 0.732 - - - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
89. bre bre 1233 1.52 - 0.764 - - - 0.756 - - -
90. cyp2aa8 ENSDARG00000104540 2947 1.519 - 0.715 - - - 0.804 - - - cytochrome P450, family 2, subfamily AA, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-041010-183]
91. tnfaip3 ENSDARG00000027777 1066 1.518 0.777 - - 0.741 - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
92. fam20b ENSDARG00000008573 1084 1.518 - - - - - 0.736 - 0.782 - family with sequence similarity 20, member B (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-040724-125]
93. taldo1 ENSDARG00000103369 3804 1.518 - - - - - 0.703 - - 0.815 transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
94. wnt10a ENSDARG00000017155 491 1.517 - - - - - 0.733 0.784 - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
95. twf1b ENSDARG00000011661 630 1.516 - - - - - - 0.779 0.737 - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
96. stox1 ENSDARG00000062593, ENSDARG00000116897 1174 1.516 - - - 0.793 - 0.723 - - - storkhead box 1 [Source:ZFIN;Acc:ZDB-GENE-030925-2]
97. znf395a ENSDARG00000060113 3874 1.513 - - - 0.705 - 0.808 - - - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
98. aldh2.2_1 ENSDARG00000028087 279 1.507 - 0.756 - - - - 0.751 - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
99. fam89a ENSDARG00000079979 4375 1.506 - - - - - - 0.740 - 0.766 family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
100. ATP10B ENSDARG00000076230 989 1.505 - 0.791 - - - 0.714 - - - ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]

There are 1674 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA