Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc9

Gene Name Gene ID Reads Annotation
ccdc9 ENSDARG00000004636 912 coiled-coil domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060929-520]










Genes with expression patterns similar to ccdc9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc9 ENSDARG00000004636 912 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060929-520]
2. HTR1E 103 1.657 - 0.827 - - - - - - 0.830 5-hydroxytryptamine receptor 1E
3. tacc1 ENSDARG00000073753 1127 1.651 - 0.833 - - - - - - 0.818 transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
4. sin3ab ENSDARG00000059812 2140 1.649 - 0.830 - - - - - - 0.819 SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
5. b3gnt2l ENSDARG00000068219 1875 1.636 - - - - - 0.714 - - 0.922 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
6. lmo7a ENSDARG00000004930 2414 1.585 - 0.878 - - - - - - 0.707 LIM domain 7a [Source:ZFIN;Acc:ZDB-GENE-030219-74]
7. stmn4l ENSDARG00000043932 654 1.563 - 0.740 - - - - - - 0.823 stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
8. ppp6r2b ENSDARG00000069654 323 1.563 - - - - - 0.734 - - 0.829 protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
9. ssh2b ENSDARG00000098955 614 1.525 - - - - - - - 0.719 0.806 slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
10. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 1.511 - - - - - 0.703 - - 0.808 bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
11. trim35-28 ENSDARG00000021021 1380 1.5 - - - - - 0.723 - - 0.777 tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
12. col6a6 col6a6 1165 1.493 - 0.722 - - - 0.771 - - -
13. atp6ap1b ENSDARG00000037153 3970 1.475 0.715 - - - - - - - 0.760 ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
14. gkap1 ENSDARG00000068123 2645 1.472 - 0.743 - - - - - - 0.729 G kinase anchoring protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2485]
15. CPAMD8 ENSDARG00000056530 3481 1.47 - - - - - 0.706 - - 0.764 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
16. frem1a ENSDARG00000069473 1847 1.429 - - - - - 0.711 - - 0.718 Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
17. glrx5 ENSDARG00000043665 2687 0.957 - - - - - - - - 0.957 glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
18. axin1 ENSDARG00000102964 1710 0.954 - - - - - - - - 0.954 axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
19. taldo1 ENSDARG00000103369 3804 0.953 - - - - - - - - 0.953 transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
20. rpz5 ENSDARG00000075718 1703 0.946 - - - - - - - - 0.946 rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
21. sh3gl3a ENSDARG00000013360 3602 0.935 - - - - - - - - 0.935 SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
22. RB1CC1 ENSDARG00000076559 2771 0.934 - - - - - - - - 0.934 RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
23. cbx6a ENSDARG00000071051 379 0.934 - 0.934 - - - - - - - chromobox homolog 6a [Source:ZFIN;Acc:ZDB-GENE-040808-26]
24. RPRD1A ENSDARG00000104861 2560 0.929 - - - - - - - - 0.929 regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
25. xylt1 ENSDARG00000061248 2357 0.929 - - - - - - - - 0.929 xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
26. zfand3 ENSDARG00000052833 2682 0.924 - - - - - - - - 0.924 zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
27. podxl ENSDARG00000031228 1744 0.921 - - - - - - - - 0.921 podocalyxin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2805]
28. kmt2d ENSDARG00000037060 1232 0.911 - 0.911 - - - - - - - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
29. rab11fip4a ENSDARG00000090170 839 0.91 - 0.910 - - - - - - - RAB11 family interacting protein 4 (class II) a [Source:ZFIN;Acc:ZDB-GENE-040718-266]
30. TRAPPC10 ENSDARG00000098118 954 0.905 - 0.905 - - - - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
31. brd7 ENSDARG00000008380 3654 0.901 - - - - - - - - 0.901 bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
32. ube2t ENSDARG00000063285 716 0.901 - 0.901 - - - - - - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
33. znf438 ENSDARG00000061311 524 0.896 - 0.896 - - - - - - - zinc finger protein 438 [Source:ZFIN;Acc:ZDB-GENE-060929-868]
34. higd2a ENSDARG00000052371 7354 0.895 - - - - - - - - 0.895 HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]
35. smarcad1 smarcad1 1457 0.894 - 0.894 - - - - - - -
36. asnsd1 830 0.891 - 0.891 - - - - - - - asparagine synthetase domain containing 1, transcript variant X1
37. CEP152 ENSDARG00000075725 391 0.89 - 0.890 - - - - - - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
38. ralgps2 ENSDARG00000026519 1610 0.888 - 0.888 - - - - - - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
39. coq2 ENSDARG00000059510 505 0.886 - 0.886 - - - - - - - coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-84]
40. wdr59 ENSDARG00000088817 1005 0.886 - 0.886 - - - - - - - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
41. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.886 - 0.886 - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
42. BX897684.1 BX897684.1 636 0.884 - 0.884 - - - - - - -
43. parp6a ENSDARG00000042703 112 0.884 - 0.884 - - - - - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
44. CPEB2 ENSDARG00000052604 2646 0.884 - - - - - - - - 0.884 cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
45. MIER3_1 MIER3_1 756 0.883 - 0.883 - - - - - - -
46. CT573152.3 CT573152.3 206 0.883 - 0.883 - - - - - - -
47. cnot10 ENSDARG00000058528 478 0.882 - 0.882 - - - - - - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
48. CU929175.1 CU929175.1 200 0.882 - 0.882 - - - - - - -
49. tmem19 414 0.88 - 0.880 - - - - - - - transmembrane protein 19
50. si:dkey-246i14.3 ENSDARG00000090427 365 0.879 - 0.879 - - - - - - - si:dkey-246i14.3 [Source:ZFIN;Acc:ZDB-GENE-100922-64]
51. zgc:194469 ENSDARG00000104367 93 0.879 - 0.879 - - - - - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
52. cep135 ENSDARG00000002991 164 0.878 - 0.878 - - - - - - - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
53. ptk7a ENSDARG00000011863 450 0.877 - 0.877 - - - - - - - protein tyrosine kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050522-216]
54. smap1 ENSDARG00000031302 222 0.876 - 0.876 - - - - - - - small ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-060920-2]
55. cldn11b ENSDARG00000030723 863 0.876 - 0.876 - - - - - - - claudin 11b [Source:ZFIN;Acc:ZDB-GENE-010328-13]
56. slc9a8 ENSDARG00000020699 206 0.876 - 0.876 - - - - - - - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
57. ccng2 ENSDARG00000017602 3141 0.874 - - - - - - - - 0.874 cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
58. CCNYL1 ENSDARG00000099692 1330 0.873 - 0.873 - - - - - - - cyclin Y-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-732]
59. PHYKPL ENSDARG00000040566 435 0.873 - 0.873 - - - - - - - 5-phosphohydroxy-L-lysine phospho-lyase [Source:ZFIN;Acc:ZDB-GENE-051127-33]
60. arhgap27 ENSDARG00000104255 439 0.871 - 0.871 - - - - - - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
61. znf511 ENSDARG00000000760 446 0.87 - 0.870 - - - - - - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
62. cbx8a ENSDARG00000087327 361 0.87 - 0.870 - - - - - - - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
63. helz ENSDARG00000030560 3259 0.869 - - - - - - - - 0.869 helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
64. tmem101 ENSDARG00000114508 494 0.869 - 0.869 - - - - - - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
65. si:ch211-194k22.8 ENSDARG00000096711 1318 0.869 - 0.869 - - - - - - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
66. rab6bb ENSDARG00000031343 1381 0.868 - 0.868 - - - - - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
67. si:dkey-47k16.3 si:dkey-47k16.3 17 0.868 - 0.868 - - - - - - -
68. si:dkey-51a16.9 ENSDARG00000039483 444 0.867 - 0.867 - - - - - - - si:dkey-51a16.9 [Source:ZFIN;Acc:ZDB-GENE-030616-560]
69. heca ENSDARG00000042877 200 0.867 - - - - - - 0.867 - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
70. paplnb ENSDARG00000042186 18 0.867 - 0.867 - - - - - - - papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
71. ppfia4 ENSDARG00000053205 276 0.866 - 0.866 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
72. fam134c fam134c 1550 0.866 - 0.866 - - - - - - -
73. nr1d4b ENSDARG00000059370 243 0.866 - 0.866 - - - - - - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
74. ppm1ab ENSDARG00000043250 772 0.866 - 0.866 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
75. efna3b ENSDARG00000098295 319 0.865 - 0.865 - - - - - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
76. zgc:174273 zgc:174273 374 0.864 - 0.864 - - - - - - -
77. atp6ap1a ENSDARG00000041417 898 0.864 - 0.864 - - - - - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
78. C7H4orf48 C7H4orf48 1455 0.863 - 0.863 - - - - - - -
79. CR382385.2 ENSDARG00000115992 353 0.863 - 0.863 - - - - - - -
80. med14 ENSDARG00000009953 1383 0.862 - 0.862 - - - - - - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
81. zer1 ENSDARG00000105123 682 0.861 - 0.861 - - - - - - - zyg-11 related, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-040426-2307]
82. znf319 znf319 3027 0.86 - 0.860 - - - - - - -
83. RNF219 ENSDARG00000090904 176 0.86 - 0.860 - - - - - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
84. mir130b 180 0.86 - 0.860 - - - - - - - microRNA 130b
85. nedd1 ENSDARG00000013472 209 0.859 - 0.859 - - - - - - - neural precursor cell expressed, developmentally down-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2906]
86. zgc:158320 ENSDARG00000099373 161 0.859 - 0.859 - - - - - - - zgc:158320 [Source:ZFIN;Acc:ZDB-GENE-061201-33]
87. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 0.859 - 0.859 - - - - - - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
88. TMTC2 TMTC2 478 0.858 - 0.858 - - - - - - -
89. CABZ01068153.1 CABZ01068153.1 211 0.858 - 0.858 - - - - - - -
90. SPAG5 SPAG5 1117 0.858 - 0.858 - - - - - - -
91. nup214 ENSDARG00000016212 163 0.857 - 0.857 - - - - - - - nucleoporin 214 [Source:ZFIN;Acc:ZDB-GENE-110203-3]
92. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.857 - 0.857 - - - - - - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
93. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.857 - 0.857 - - - - - - - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
94. nbeaa ENSDARG00000070080 862 0.856 - 0.856 - - - - - - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
95. si:ch211-278j3.3 ENSDARG00000020284 478 0.856 - 0.856 - - - - - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
96. itpa ENSDARG00000057529 104 0.855 - 0.855 - - - - - - - inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
97. uox ENSDARG00000007024 205 0.854 - 0.854 - - - - - - - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]
98. acy3.1 ENSDARG00000093003 54 0.854 - 0.854 - - - - - - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
99. UTS2R 109 0.854 - 0.854 - - - - - - - urotensin 2 receptor
100. clvs2 ENSDARG00000053122 1390 0.853 - 0.853 - - - - - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]

There are 921 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA