Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ccdc6b

Gene Name Gene ID Reads Annotation
ccdc6b ENSDARG00000017595 828 coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]










Genes with expression patterns similar to ccdc6b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc6b ENSDARG00000017595 828 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
2. negr1 ENSDARG00000021607 1051 2.996 - - 0.722 - - 0.802 0.734 0.738 - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
3. kif5c ENSDARG00000076027 424 2.622 - - - - - 0.801 0.894 0.927 - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
4. CABZ01028287.1 CABZ01028287.1 626 2.554 - - - - - 0.917 0.782 0.855 -
5. PPP1R9B PPP1R9B 855 2.519 - - - - - 0.817 0.843 0.859 -
6. cspg5a ENSDARG00000069981 1699 2.463 - - - - - 0.880 0.764 0.819 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
7. sec22c ENSDARG00000063387 203 2.386 - - - - - 0.702 0.777 0.907 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
8. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.381 - - - - - 0.856 0.823 - 0.702 LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
9. scn2b ENSDARG00000101713 796 2.374 - - - - - 0.767 0.767 0.840 - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
10. arnt2 ENSDARG00000103697 5731 2.364 - - - - - 0.824 0.832 - 0.708 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
11. elavl4 ENSDARG00000045639 998 2.363 - - - - - 0.898 0.739 - 0.726 ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
12. mapk11 ENSDARG00000045836 846 2.349 - - - - - 0.892 0.733 0.724 - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
13. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 2.34 - - - - - 0.703 0.750 0.887 - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
14. ptprna ENSDARG00000058646 1327 2.338 - - - - - 0.708 0.739 0.891 - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
15. C8H1orf106 C8H1orf106 2690 2.329 - - - - - 0.870 0.737 0.722 -
16. ctnnd2b ENSDARG00000003779 964 2.32 - - - - - 0.831 0.776 0.713 - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
17. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 2.294 - - - - - - 0.724 0.868 0.702 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
18. lingo2 lingo2 67 2.289 - 0.711 - - - 0.793 0.785 - -
19. AGO1 ENSDARG00000092644 4521 2.283 - - - - - 0.873 0.708 0.702 - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
20. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.249 - - - - - 0.758 0.744 0.747 - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
21. gsx1 ENSDARG00000035735 1243 2.243 - - - - - 0.820 0.713 0.710 - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
22. dpysl3 ENSDARG00000002587 4381 2.24 - - - - - 0.813 0.719 - 0.708 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
23. phactr3a ENSDARG00000058243 150 2.177 - 0.713 - - - 0.702 0.762 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
24. coe2 coe2 1633 2.157 - - - - - 0.710 0.733 - 0.714
25. pcyt1ba ENSDARG00000058162 206 1.814 - - - - - - 0.895 0.919 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
26. mpped2 ENSDARG00000034443, ENSDARG00000114674 527 1.795 - - - - - - 0.849 0.946 - metallophosphoesterase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8903]
27. si:ch73-127m5.1 ENSDARG00000060680 253 1.78 - - - - - 0.858 - 0.922 - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
28. MAST1_1 MAST1_1 1595 1.774 - - - - - 0.821 - 0.953 -
29. zic6 ENSDARG00000071496 402 1.75 - - - - - 0.853 - 0.897 - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
30. fyna ENSDARG00000011370 1679 1.748 - - - - - 0.816 - 0.932 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
31. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.742 - - - - - 0.930 0.812 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
32. SPTBN4_1 ENSDARG00000092624 473 1.739 - - - - - 0.871 - 0.868 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
33. gpr61 ENSDARG00000055570 128 1.729 - - - - - 0.840 - 0.889 - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
34. cldn5a ENSDARG00000043716 3865 1.722 - - - - - - 0.784 0.938 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
35. zgc:112001 ENSDARG00000078034 93 1.721 - - - - - 0.832 - 0.889 - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
36. dync1i1 ENSDARG00000060948 554 1.72 - - - - - 0.860 0.860 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
37. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.719 - - - - - 0.801 - 0.918 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
38. MYO1D ENSDARG00000036863 768 1.719 - 0.815 - - - - - 0.904 - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
39. E2F2 E2F2 871 1.712 - - - - - 0.772 - 0.940 -
40. POLE4 ENSDARG00000013016 848 1.712 - - - - - - 0.861 0.851 - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
41. zgc:100906 ENSDARG00000033599 344 1.71 - - - - - 0.903 0.807 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
42. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 1.71 - 0.817 - - - - - 0.893 - Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
43. rheb ENSDARG00000090213 1432 1.708 - - - - - 0.907 0.801 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
44. BX511121.1 ENSDARG00000029997 1774 1.707 - - - - - 0.894 0.813 - -
45. trim36 ENSDARG00000062794 785 1.707 - - - - - 0.859 0.848 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
46. emc9 ENSDARG00000034633 686 1.706 - - - - - - 0.780 0.926 - ER membrane protein complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-040426-693]
47. fam219aa ENSDARG00000016396 1788 1.703 - 0.783 - - - - - 0.920 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
48. her4.3 ENSDARG00000070770 613 1.701 - - - - - 0.877 0.824 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
49. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.697 - - - - - 0.809 - 0.888 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
50. ccdc92 ENSDARG00000041750, ENSDARG00000115475 283 1.696 - - - - - 0.924 0.772 - - coiled-coil domain containing 92 [Source:ZFIN;Acc:ZDB-GENE-051113-120]
51. nptnb ENSDARG00000043864 165 1.694 - - - - - 0.843 0.851 - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
52. amer2 ENSDARG00000075222 594 1.688 - - - - - 0.788 - 0.900 - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
53. lgi1a ENSDARG00000020493 1218 1.685 - - - - - 0.821 0.864 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
54. TMEM55B_1 TMEM55B_1 495 1.681 - - - - - 0.794 0.887 - -
55. AL935029.1 AL935029.1 514 1.674 - - - - - 0.797 0.877 - -
56. slc35g2b ENSDARG00000045447 378 1.674 - - - - - 0.887 0.787 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
57. GRIN3A ENSDARG00000075802 27 1.673 - - - - - 0.867 0.806 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
58. scrn2 ENSDARG00000043497 204 1.673 - - - - - - 0.785 0.888 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
59. GADD45G GADD45G 382 1.672 - - - - - 0.872 0.800 - -
60. pou3f3a ENSDARG00000042032 2835 1.672 - - - - - 0.809 0.863 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
61. SLITRK4 ENSDARG00000079781 54 1.672 - - - - - 0.830 0.842 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
62. pcloa ENSDARG00000063299 353 1.671 - - - - - 0.900 0.771 - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
63. dlgap3 ENSDARG00000055459 85 1.666 - - - - - 0.824 0.842 - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
64. fabp7b ENSDARG00000034650 397 1.665 - - - - - - 0.775 0.890 - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
65. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.661 - - - - - 0.876 0.785 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
66. BX324131.3 BX324131.3 278 1.659 - - - - - 0.759 - 0.900 -
67. si:ch73-389b16.2 ENSDARG00000103802 340 1.656 - - - - - 0.767 0.889 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
68. ankrd10a ENSDARG00000037100 375 1.654 - - - - - 0.718 - 0.936 - ankyrin repeat domain 10a [Source:ZFIN;Acc:ZDB-GENE-040426-700]
69. chrna6 ENSDARG00000055559 60 1.654 - - - - - 0.879 0.775 - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
70. hs3st1l2 ENSDARG00000035578 279 1.654 - - - - - - 0.831 0.823 - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
71. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.652 - - - - - 0.738 - 0.914 - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
72. her8.2 ENSDARG00000069675 315 1.652 - - - - - 0.780 0.872 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
73. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.651 - - - - - 0.879 0.772 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
74. ZNF337_7 ZNF337_7 198 1.648 - - - - - - 0.731 0.917 -
75. si:ch211-26b3.4 ENSDARG00000075491 50 1.647 - - - - - 0.854 0.793 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
76. cacna1ba ENSDARG00000021735 870 1.644 - 0.721 - - - 0.923 - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
77. sult4a1 ENSDARG00000101967 205 1.643 - - - - - 0.839 0.804 - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
78. CR407704.1 CR407704.1 188 1.643 - - - - - 0.843 0.800 - -
79. map7d2b ENSDARG00000045316 702 1.641 - - - - - 0.841 0.800 - - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
80. fat3a ENSDARG00000033840 902 1.64 - - - - - - 0.805 0.835 - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
81. mnx2b ENSDARG00000030350 484 1.638 - - - - - 0.850 0.788 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
82. nhlh2 ENSDARG00000025495 1860 1.635 - - - - - 0.806 0.829 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
83. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.633 - - - - - 0.800 0.833 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
84. CR352229.2 CR352229.2 784 1.632 - 0.703 - - - - - 0.929 -
85. ATP6AP1L ATP6AP1L 164 1.632 - - - - - 0.809 0.823 - -
86. CEP57 ENSDARG00000067668 345 1.629 - - - - - - 0.736 0.893 - centrosomal protein 57 [Source:ZFIN;Acc:ZDB-GENE-070112-522]
87. plcxd3 ENSDARG00000054794 112 1.629 - - - - - 0.788 0.841 - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-10]
88. SYT2 ENSDARG00000014169 265 1.629 - - - - - 0.926 0.703 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
89. cep135 ENSDARG00000002991 164 1.629 - - - - - - 0.752 0.877 - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
90. ENSDARG00000090150 ENSDARG00000090150 966 1.629 - - - - - - 0.762 0.867 -
91. elavl3 ENSDARG00000014420 8644 1.628 - - - - - 0.864 0.764 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
92. fbxo41 ENSDARG00000078908 95 1.626 - - - - - 0.861 0.765 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
93. slc12a5b ENSDARG00000078187 329 1.622 - - - - - 0.820 0.802 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
94. zgc:194665 ENSDARG00000004577 136 1.622 - - - - - 0.823 0.799 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
95. clstn1 ENSDARG00000031720 5286 1.622 - - - - - 0.884 0.738 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
96. sulf2l sulf2l 4980 1.62 - 0.745 - - - - 0.875 - -
97. neurog1 ENSDARG00000056130 3924 1.618 - - - - - 0.859 0.759 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
98. ZBTB26 ENSDARG00000028949 129 1.618 - - - - - 0.714 - 0.904 - zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:HGNC:23383]
99. st3gal2 ENSDARG00000112898 370 1.616 - - - - - 0.865 0.751 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
100. RNF208 ENSDARG00000078056 60 1.615 - - - - - 0.789 0.826 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]

There are 2033 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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