Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ccdc6a

Gene Name Gene ID Reads Annotation
ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]










Genes with expression patterns similar to ccdc6a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
2. snai1b ENSDARG00000046019 886 2.548 - 0.754 0.957 - - 0.837 - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
3. phf3 ENSDARG00000034768 1372 1.832 - - 0.960 - - 0.872 - - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
4. MSL1_1 MSL1_1 2365 1.815 - - 0.957 - - 0.858 - - -
5. chst13 chst13 669 1.809 - - 0.948 - - 0.861 - - -
6. phf10 ENSDARG00000070084 1210 1.806 - - 0.960 - - 0.846 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
7. arhgap24 ENSDARG00000100973 1105 1.805 - - 0.967 - - - 0.838 - - Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
8. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.792 - - 0.961 - - 0.831 - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
9. CT990561.1 ENSDARG00000058284 566 1.79 - - 0.939 - - 0.851 - - - EPH receptor A5 [Source:NCBI gene;Acc:797595]
10. ek1 ENSDARG00000020080 742 1.788 - - 0.972 - - 0.816 - - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
11. wnk1b ENSDARG00000039392 3587 1.755 - 0.799 0.956 - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
12. med21 ENSDARG00000026839 1083 1.748 - 0.782 0.966 - - - - - - mediator complex subunit 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2763]
13. htatsf1 ENSDARG00000056649 2018 1.737 0.792 - 0.945 - - - - - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
14. ndc80 ENSDARG00000071694 1162 1.719 - 0.757 0.962 - - - - - - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
15. exoc6 ENSDARG00000020521 1533 1.713 - - 0.970 - - 0.743 - - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]
16. tmem2 2572 1.71 - - 0.949 - - 0.761 - - - transmembrane protein 2, transcript variant X1
17. ppp2r5eb ENSDARG00000069118 1902 1.708 - - 0.958 - - - 0.750 - - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
18. tnfaip3 ENSDARG00000027777 1066 1.706 - - 0.982 - - 0.724 - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
19. adnp2b ENSDARG00000028431 4683 1.687 - - 0.973 - - 0.714 - - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
20. GIGYF1_1 GIGYF1_1 1865 1.685 - - 0.957 - - 0.728 - - -
21. rnd1l rnd1l 984 1.677 - - 0.961 - - 0.716 - - -
22. sema6a ENSDARG00000102165 1401 1.677 - - 0.964 - - 0.713 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
23. prr18 ENSDARG00000093768 409 1.671 - - 0.971 - - 0.700 - - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
24. fam53b ENSDARG00000016156 2143 1.66 0.742 - - - - 0.918 - - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
25. tmem201 ENSDARG00000077307 453 1.649 0.816 - - - - 0.833 - - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
26. stxbp1a ENSDARG00000001994 5154 1.647 - - 0.931 - - 0.716 - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
27. nr2f1a ENSDARG00000052695 5037 1.642 - - 0.853 - - 0.789 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
28. cdc42 ENSDARG00000044573 11795 1.639 0.810 - 0.829 - - - - - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
29. senp6a ENSDARG00000102923 908 1.624 - - - - - 0.843 0.781 - - SUMO specific peptidase 6a [Source:ZFIN;Acc:ZDB-GENE-080204-25]
30. fbxo21 ENSDARG00000076611 466 1.605 0.743 - - - - - 0.862 - - F-box protein 21 [Source:ZFIN;Acc:ZDB-GENE-100922-229]
31. BX927294.1 BX927294.1 361 1.593 - 0.745 - - - 0.848 - - -
32. pum1 ENSDARG00000099256 5017 1.591 - - 0.856 - - 0.735 - - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
33. rgs3a ENSDARG00000099746 727 1.59 - - - - - 0.775 0.815 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
34. BX649494.1 BX649494.1 195 1.589 0.747 - - - - 0.842 - - -
35. KAT5 KAT5 623 1.578 - 0.707 - - - 0.871 - - -
36. NECAB3 ENSDARG00000074794 379 1.575 0.779 - - - - 0.796 - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
37. ndst3 ENSDARG00000041776 605 1.574 0.723 - - - - 0.851 - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
38. fat1 fat1 3934 1.571 - 0.711 0.860 - - - - - -
39. eif3m ENSDARG00000013931 8117 1.571 - 0.729 0.842 - - - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
40. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 1.568 - 0.706 - - - 0.862 - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
41. STRADB STRADB 403 1.564 0.790 - - - - 0.774 - - -
42. tenm3 ENSDARG00000005479 3799 1.564 - - - - - 0.780 0.784 - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
43. fscn1a ENSDARG00000059680 3999 1.563 - - - - - 0.827 0.736 - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
44. rab25a ENSDARG00000058800 451 1.558 0.735 - - - - 0.823 - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
45. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.545 - 0.731 - - - 0.814 - - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
46. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.544 - 0.720 - - - 0.824 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
47. PAPD5 2090 1.544 0.805 0.739 - - - - - - - PAP associated domain containing 5, transcript variant X1
48. pex6 ENSDARG00000070958 323 1.537 0.747 - - - - 0.790 - - - peroxisomal biogenesis factor 6 [Source:ZFIN;Acc:ZDB-GENE-081104-252]
49. TNRC6C_1 TNRC6C_1 6574 1.534 - 0.701 0.833 - - - - - -
50. CXXC5 CXXC5 1332 1.533 - - - - - 0.766 0.767 - -
51. rangap1a ENSDARG00000041317 1456 1.532 - - - - - 0.812 0.720 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
52. sms ENSDARG00000008155 1192 1.529 - 0.820 - - - 0.709 - - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
53. si:dkey-231k6.4 si:dkey-231k6.4 72 1.528 0.768 - - - - 0.760 - - -
54. wdr43 ENSDARG00000077264 1992 1.526 - 0.735 - - - 0.791 - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
55. stox2a ENSDARG00000070162 1620 1.52 - - - - - 0.813 0.707 - - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
56. SERBP1 SERBP1 9276 1.518 - - 0.802 - - 0.716 - - -
57. drg1 ENSDARG00000039345 7545 1.517 - - 0.786 - - 0.731 - - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
58. ubtf ENSDARG00000035066 4070 1.516 - 0.722 - - - 0.794 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
59. TNRC18 ENSDARG00000077052 1095 1.512 - 0.748 - - - 0.764 - - - trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
60. cox16 ENSDARG00000039136 1066 1.505 0.789 - - - - 0.716 - - - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
61. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.505 - 0.708 - - - 0.797 - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
62. ralbp1 ENSDARG00000078653 2440 1.502 - 0.731 - - - 0.771 - - - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
63. caly ENSDARG00000036008 1002 1.501 - - - - - 0.793 0.708 - - calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
64. rbm28 ENSDARG00000025332 2685 1.501 - - - - - 0.768 - 0.733 - RNA binding motif protein 28 [Source:ZFIN;Acc:ZDB-GENE-040426-960]
65. zfand5b ENSDARG00000002271 4145 1.497 - 0.783 - - - 0.714 - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
66. CYHR1 ENSDARG00000061057 2625 1.495 - 0.724 - - - 0.771 - - - cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
67. hdgfrp2 7462 1.492 - 0.730 - - - 0.762 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
68. NUDT8 ENSDARG00000007722 329 1.491 0.728 - - - - 0.763 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
69. kdm6a ENSDARG00000061759 1154 1.49 - 0.705 - - - 0.785 - - - lysine (K)-specific demethylase 6A [Source:ZFIN;Acc:ZDB-GENE-081105-56]
70. RANBP2 ENSDARG00000093125 1854 1.489 - 0.740 - - - - - 0.749 - RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
71. cd99l2 ENSDARG00000056722 5036 1.489 - 0.729 - - - 0.760 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
72. si:ch211-161h7.4 ENSDARG00000087238 4399 1.488 - 0.703 0.785 - - - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
73. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.482 - - - - - 0.731 0.751 - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
74. impdh1b ENSDARG00000029524 7472 1.48 - 0.751 - - - 0.729 - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
75. nck1b ENSDARG00000075369 1596 1.48 - 0.707 - - - 0.773 - - - NCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
76. Mar-05 Mar-05 2391 1.477 - 0.714 - - - 0.763 - - -
77. hoxc6b ENSDARG00000101954 967 1.474 - - - - - 0.756 0.718 - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
78. rnf113a ENSDARG00000037930 849 1.469 - 0.747 - - - 0.722 - - - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
79. golga5 ENSDARG00000039279 707 1.469 0.729 - - - - 0.740 - - - golgin A5 [Source:ZFIN;Acc:ZDB-GENE-040426-2749]
80. slc16a9b ENSDARG00000104687 826 1.466 - 0.712 - - - 0.754 - - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
81. gipc1 ENSDARG00000104483 2913 1.464 - 0.713 - - - 0.751 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
82. BX682552.2 BX682552.2 1427 1.454 - 0.723 - - - 0.731 - - -
83. CREBZF ENSDARG00000089787 4261 1.448 - 0.748 - - - - - - 0.700 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
84. tnfaip8 tnfaip8 1170 1.441 - - - - - 0.739 0.702 - -
85. nf1b ENSDARG00000004184 548 1.43 0.714 - - - - 0.716 - - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
86. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.428 - 0.701 - - - 0.727 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
87. crfb6 1137 1.426 - - - - - 0.725 0.701 - - cytokine receptor family member b6
88. lrrc47 ENSDARG00000053138 417 1.42 - 0.710 - - - 0.710 - - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
89. neo1 neo1 4056 1.418 - 0.707 - - - 0.711 - - -
90. tmsb ENSDARG00000054911 6411 1.412 - 0.710 - - - 0.702 - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
91. pmaip1 ENSDARG00000089307 236 1.405 0.702 - - - - 0.703 - - - phorbol-12-myristate-13-acetate-induced protein 1 [Source:ZFIN;Acc:ZDB-GENE-070119-3]
92. pi4k2a ENSDARG00000033666 1257 0.977 - - 0.977 - - - - - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
93. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 0.977 - - 0.977 - - - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
94. PKN2 ENSDARG00000101293 358 0.976 - - 0.976 - - - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
95. zgc:158309 zgc:158309 2696 0.976 - - 0.976 - - - - - -
96. atg4a ENSDARG00000014531 481 0.975 - - 0.975 - - - - - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
97. rexo1 ENSDARG00000026986 770 0.975 - - 0.975 - - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
98. SEMA4C ENSDARG00000079611 610 0.974 - - 0.974 - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:ZFIN;Acc:ZDB-GENE-080303-16]
99. fam203a fam203a 570 0.974 - - 0.974 - - - - - -
100. TUBGCP6 1991 0.974 - - 0.974 - - - - - - tubulin, gamma complex associated protein 6

There are 1972 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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