Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc47

Gene Name Gene ID Reads Annotation
ccdc47 ENSDARG00000054362 5970 coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]










Genes with expression patterns similar to ccdc47

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc47 ENSDARG00000054362 5970 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
2. SNRPG ENSDARG00000099667 18697 2.463 - 0.860 - - - 0.753 0.850 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
3. pl10 pl10 10795 2.421 - 0.844 - - - 0.793 0.784 - -
4. pa2g4b ENSDARG00000070657 7999 2.388 - 0.801 - - - 0.749 0.838 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
5. ipo7 ENSDARG00000035751 7095 2.382 0.893 0.776 - - - - 0.713 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
6. CYHR1 ENSDARG00000061057 2625 2.37 - 0.787 - - - 0.772 0.811 - - cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
7. neo1 neo1 4056 2.37 0.812 0.840 - - - - 0.718 - -
8. nnt ENSDARG00000023536 7357 2.338 - 0.869 - - - 0.731 0.738 - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
9. sarnp ENSDARG00000059357 4768 2.303 - 0.838 - - - 0.703 0.762 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
10. slc25a11 ENSDARG00000035741 3377 2.271 - - - - 0.734 0.784 0.753 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
11. DNAJA4 ENSDARG00000051762 5657 2.264 0.807 0.753 0.704 - - - - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
12. ube2g1b ENSDARG00000069527 5376 2.251 - 0.737 - - - 0.761 0.753 - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
13. smyd2b ENSDARG00000005629 8181 2.246 - 0.767 0.717 - 0.762 - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
14. sucla2 ENSDARG00000005359 5992 2.245 - 0.806 0.738 - - 0.701 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
15. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 2.196 0.758 0.715 - - - - 0.723 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
16. pbxip1a ENSDARG00000071015 4960 2.186 - 0.756 0.726 - 0.704 - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
17. pdcd4a ENSDARG00000021702 7293 2.18 - 0.738 0.725 - - - 0.717 - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
18. ndufv1 ENSDARG00000036438 8437 2.162 - - 0.749 - 0.707 0.706 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
19. AIMP1 ENSDARG00000060036 4136 2.149 - 0.714 0.703 - - 0.732 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
20. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.729 - 0.886 - - - - 0.843 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
21. tead3a ENSDARG00000074321 2240 1.71 0.841 - - - - - 0.869 - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
22. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.683 - 0.801 - - - - 0.882 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
23. cdv3 ENSDARG00000023028 12380 1.656 0.824 - - - - - 0.832 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
24. ppp2r1a ppp2r1a 11291 1.653 - 0.801 - - - - 0.852 - -
25. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.645 0.825 - - - - - 0.820 - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
26. pptc7b ENSDARG00000052658 1756 1.643 - 0.803 - - - 0.840 - - - PTC7 protein phosphatase homolog b [Source:ZFIN;Acc:ZDB-GENE-081105-111]
27. anp32e ENSDARG00000054804 11017 1.642 - 0.798 - - - - 0.844 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
28. ppig ENSDARG00000044431 3427 1.636 0.836 - - - - - 0.800 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
29. atp5mf ENSDARG00000037867 11052 1.628 0.876 0.752 - - - - - - - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
30. stip1 ENSDARG00000004906 7742 1.625 - - - - - 0.816 0.809 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
31. zgc:66479 ENSDARG00000008732 3347 1.624 0.851 0.773 - - - - - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
32. gpx4b ENSDARG00000076836 8085 1.622 0.860 - - - - - 0.762 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
33. mars ENSDARG00000034396 3618 1.618 - 0.861 - - - - 0.757 - - methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
34. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.616 0.853 0.763 - - - - - - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
35. camlg ENSDARG00000100409 2157 1.61 0.847 0.763 - - - - - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
36. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.608 - - - - - 0.731 0.877 - - proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
37. atp5o 10343 1.607 0.807 - - - - - 0.800 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
38. myeov2 3351 1.607 0.821 - - - - - 0.786 - - myeloma overexpressed 2
39. kank1 kank1 2430 1.604 0.841 - - - - - 0.763 - -
40. mrps24 ENSDARG00000100116 1750 1.6 0.851 0.749 - - - - - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
41. ppdpfa ENSDARG00000007682 3214 1.598 - - 0.801 - - - 0.797 - - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]
42. eno3 ENSDARG00000039007 11355 1.597 0.854 0.743 - - - - - - - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
43. aamp ENSDARG00000045019 2818 1.597 0.848 - - - - - 0.749 - - angio-associated, migratory cell protein [Source:ZFIN;Acc:ZDB-GENE-040426-2370]
44. HOMEZ HOMEZ 1824 1.595 0.829 - - - - - 0.766 - -
45. entpd1 ENSDARG00000045066 2930 1.593 - - - - - 0.795 0.798 - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-58]
46. pygmb ENSDARG00000013317 5454 1.593 0.826 0.767 - - - - - - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
47. GIT1 ENSDARG00000039489 1157 1.59 0.816 - - - - - 0.774 - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
48. col27a1a 1747 1.588 0.854 0.734 - - - - - - - collagen, type XXVII, alpha 1a
49. ncl ENSDARG00000002710 16951 1.588 0.735 0.853 - - - - - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
50. gps1 ENSDARG00000040650 3893 1.586 - - - - - 0.828 0.758 - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
51. rab5if ENSDARG00000074790 8807 1.586 - 0.847 - - - 0.739 - - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
52. gpx7 ENSDARG00000091511 3045 1.581 - 0.791 - - - - 0.790 - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
53. dnaja2 ENSDARG00000104066 11946 1.578 0.727 0.851 - - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
54. efna1a ENSDARG00000030326 1692 1.576 0.812 - - - - - 0.764 - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
55. rcor1 ENSDARG00000031434 2733 1.575 0.844 - - - - - 0.731 - - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
56. aurkaip1 ENSDARG00000074985 2214 1.572 0.859 0.713 - - - - - - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
57. kpna3 ENSDARG00000052641 5347 1.572 - 0.833 - - - 0.739 - - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
58. psmc1a ENSDARG00000030537 2799 1.57 - 0.810 - - - - 0.760 - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
59. hsbp1b ENSDARG00000041921 6170 1.569 - 0.837 - - - - 0.732 - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
60. slc25a12 ENSDARG00000102362 2773 1.569 - 0.845 - - - - 0.724 - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
61. hnrpl 6412 1.569 0.846 - - - - - 0.723 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
62. nop56 ENSDARG00000012820 15231 1.569 - 0.790 - - - 0.779 - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
63. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.568 0.834 - - - - - 0.734 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
64. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.567 - 0.814 - - - - 0.753 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
65. ncl1 2835 1.565 - 0.804 - - - - 0.761 - - nicalin, transcript variant X3
66. caprin1b ENSDARG00000054272 7033 1.565 - - - - - 0.727 0.838 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
67. papola ENSDARG00000009585 9567 1.564 - 0.806 - - - - 0.758 - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
68. smarca5 ENSDARG00000052348 15433 1.564 0.756 0.808 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
69. farp2 ENSDARG00000016429 3133 1.564 - 0.787 - - - - 0.777 - - FERM, RhoGEF and pleckstrin domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2993]
70. rbm8a ENSDARG00000016516 8789 1.563 0.787 - - - - - 0.776 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
71. ilk ENSDARG00000056964 6686 1.562 - 0.774 - - - 0.788 - - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
72. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.56 - - - - - 0.845 0.715 - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
73. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.556 - 0.817 - - - - 0.739 - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
74. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.554 - 0.784 - - - - 0.770 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
75. vbp1 ENSDARG00000030241 10619 1.554 - 0.709 - - - 0.845 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
76. mybphb ENSDARG00000003081 5208 1.552 0.850 0.702 - - - - - - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
77. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.551 - 0.828 - - - - 0.723 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
78. kmt2bb ENSDARG00000060697 5230 1.548 - 0.768 - - - 0.780 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
79. kmt2cb ENSDARG00000075560 4816 1.547 - 0.768 - - - - 0.779 - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
80. esd ENSDARG00000019496 3192 1.547 - 0.729 - - - 0.818 - - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
81. si:dkey-238c7.16 ENSDARG00000069537, ENSDARG00000111432 5140 1.546 - 0.737 - - - - 0.809 - - si:dkey-238c7.16 [Source:ZFIN;Acc:ZDB-GENE-030131-4169]
82. psma8 ENSDARG00000010965 8321 1.543 - 0.794 - - - 0.749 - - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
83. aldocb ENSDARG00000019702 2111 1.542 0.838 0.704 - - - - - - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
84. zgc:158296 ENSDARG00000070923 3935 1.541 0.831 - 0.710 - - - - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
85. dnajc19 ENSDARG00000044420 1756 1.541 - 0.733 - - - - 0.808 - - DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
86. cox6c ENSDARG00000038577 16845 1.54 - - - - - 0.721 0.819 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
87. znf865 ENSDARG00000036698 15532 1.54 - 0.746 - - - 0.794 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
88. rps8a ENSDARG00000055996 2785 1.538 - 0.769 - - - - 0.769 - - ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
89. tmem38a ENSDARG00000024047 41883 1.537 - - 0.801 - 0.736 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
90. ryr1b ENSDARG00000023797 5693 1.536 0.783 - 0.753 - - - - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
91. fat1 fat1 3934 1.536 - 0.829 - - - 0.707 - - -
92. spcs2 ENSDARG00000042823 10032 1.535 - - - - - 0.745 0.790 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
93. spry4 ENSDARG00000068732 2091 1.535 0.830 - - - - 0.705 - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
94. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.535 - 0.716 - - - - 0.819 - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
95. tmem258 ENSDARG00000078785 9578 1.531 0.772 - - - - - 0.759 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
96. reep3 reep3 2536 1.53 0.829 - - - - - 0.701 - -
97. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.528 - 0.780 - - - 0.748 - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
98. prkar1aa ENSDARG00000076128 6565 1.528 - - - - - - 0.764 - 0.764 protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
99. GABARAP GABARAP 8341 1.528 - 0.756 - - - - 0.772 - -
100. shfm1 7620 1.525 - 0.794 - - - - 0.731 - - split hand/foot malformation (ectrodactyly) type 1

There are 1214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA