Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ccdc43

Gene Name Gene ID Reads Annotation
ccdc43 ENSDARG00000054446 757 coiled-coil domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1587]










Genes with expression patterns similar to ccdc43

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc43 ENSDARG00000054446 757 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1587]
2. med13b ENSDARG00000003910 1143 2.291 - 0.708 - 0.864 - - 0.719 - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
3. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.609 - 0.770 - 0.839 - - - - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
4. ndufa5 ENSDARG00000039346 2617 1.601 - 0.805 - 0.796 - - - - - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
5. PACS1 PACS1 2061 1.585 - 0.773 - - - - 0.812 - -
6. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.541 0.756 0.785 - - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
7. setd3 ENSDARG00000016513 1507 1.516 - 0.741 - - - 0.775 - - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
8. spty2d1 ENSDARG00000033889, ENSDARG00000115786 1219 1.508 - 0.718 - - - - 0.790 - - SPT2 chromatin protein domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-212]
9. COL13A1 1565 1.481 - 0.738 - 0.743 - - - - - collagen, type XIII, alpha 1, transcript variant X1
10. yars ENSDARG00000035913, ENSDARG00000113430 2043 1.451 0.750 - - - - 0.701 - - - tyrosyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030425-2]
11. zcchc10 ENSDARG00000091092 1333 1.45 - 0.743 - 0.707 - - - - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
12. pcyt1aa ENSDARG00000011233 1985 1.444 - 0.724 - - - 0.720 - - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
13. rbm17 ENSDARG00000031346 2079 1.443 - - - 0.714 - - 0.729 - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
14. nol12 ENSDARG00000038027 2288 1.434 - 0.734 - - - - 0.700 - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
15. fam96b 2255 1.432 - 0.707 - - - 0.725 - - - family with sequence similarity 96, member B
16. ERRFI1 ERRFI1 664 1.421 - 0.702 - - - 0.719 - - -
17. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.411 - 0.709 - - - 0.702 - - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
18. commd7 ENSDARG00000036784, ENSDARG00000111683 997 0.92 - - - 0.920 - - - - - COMM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040801-96]
19. pcgf6 ENSDARG00000069681 2382 0.89 - - - 0.890 - - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
20. pgk1 ENSDARG00000054191 7652 0.885 - 0.885 - - - - - - - phosphoglycerate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2711]
21. fam107b ENSDARG00000026865, ENSDARG00000113209, ENSDARG00000116517 861 0.881 - - - 0.881 - - - - - family with sequence similarity 107, member B [Source:ZFIN;Acc:ZDB-GENE-031030-12]
22. nf2b ENSDARG00000025567 1441 0.881 - - - - - 0.881 - - - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
23. znf648 ENSDARG00000104823 1918 0.881 - 0.881 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
24. grm4 ENSDARG00000040156 342 0.88 - - - 0.880 - - - - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
25. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 0.879 - - - 0.879 - - - - - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
26. si:dkey-225d17.2 si:dkey-225d17.2 361 0.876 - - - 0.876 - - - - -
27. fut8 fut8 652 0.873 - - - 0.873 - - - - -
28. asap1a ENSDARG00000029463 1566 0.87 - 0.870 - - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
29. rfx1b ENSDARG00000075904 1175 0.869 - - - 0.869 - - - - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
30. nol7 ENSDARG00000075795 1559 0.857 - 0.857 - - - - - - - nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
31. fibpa ENSDARG00000016058 2148 0.854 - - - - - - 0.854 - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
32. rad21a ENSDARG00000006092 393 0.847 - - - - - - 0.847 - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
33. casc4 ENSDARG00000074490 2019 0.835 - 0.835 - - - - - - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
34. CU638714.1 ENSDARG00000100303 2132 0.835 - 0.835 - - - - - - -
35. TXNDC15 ENSDARG00000110357 492 0.834 - - - - - - 0.834 - - thioredoxin domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-070615-36]
36. zgc:66427 ENSDARG00000023303, ENSDARG00000114732 1239 0.833 - - - - - - 0.833 - - zgc:66427 [Source:ZFIN;Acc:ZDB-GENE-040426-1913]
37. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 0.832 - - - - - - 0.832 - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
38. ssbp1 ENSDARG00000039350 809 0.831 - 0.831 - - - - - - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
39. gmfb ENSDARG00000028327 6522 0.831 - - - 0.831 - - - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
40. CR388002.1 CR388002.1 1998 0.83 - 0.830 - - - - - - -
41. CABZ01097761.1 ENSDARG00000116119 445 0.828 - - - 0.828 - - - - - dual specificity protein phosphatase 13-like [Source:NCBI gene;Acc:100537679]
42. hmox2b ENSDARG00000078452, ENSDARG00000117010 884 0.828 - - - - - 0.828 - - - heme oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-091118-52]
43. kcnma1a ENSDARG00000079840 2584 0.828 - 0.828 - - - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
44. ism1 ENSDARG00000020541 1241 0.827 - 0.827 - - - - - - - isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
45. nt5dc3 ENSDARG00000062949 816 0.826 - 0.826 - - - - - - - 5'-nucleotidase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080523-3]
46. FP236812.4 FP236812.4 1244 0.826 - 0.826 - - - - - - -
47. phkg2 ENSDARG00000054208 442 0.824 - - - - - - 0.824 - - phosphorylase kinase, gamma 2 (testis) [Source:ZFIN;Acc:ZDB-GENE-040426-825]
48. trim101 ENSDARG00000018264 827 0.824 - 0.824 - - - - - - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
49. glmna ENSDARG00000058267 597 0.823 - - - - - 0.823 - - - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
50. plecb ENSDARG00000021987 13621 0.823 - 0.823 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
51. abi1b ENSDARG00000062991 1564 0.822 - 0.822 - - - - - - - abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
52. pycr1 pycr1 1258 0.821 - - - - - - 0.821 - -
53. ipo7 ENSDARG00000035751 7095 0.821 - 0.821 - - - - - - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
54. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.82 - - - 0.820 - - - - - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
55. smyd2b ENSDARG00000005629 8181 0.819 - 0.819 - - - - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
56. igdcc4 ENSDARG00000076919 1303 0.818 - 0.818 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
57. CR387996.2 CR387996.2 1272 0.818 - - - 0.818 - - - - -
58. cs ENSDARG00000103364 833 0.817 - - - - - 0.817 - - - citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]
59. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 0.816 - 0.816 - - - - - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
60. fam46ba 4575 0.816 - 0.816 - - - - - - - family with sequence similarity 46, member Ba
61. rars ENSDARG00000054530 1495 0.816 - 0.816 - - - - - - - arginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9014]
62. sik2b ENSDARG00000062315 1303 0.815 - - - 0.815 - - - - - salt-inducible kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071012-1]
63. twist2 ENSDARG00000078266 499 0.815 - 0.815 - - - - - - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
64. slc25a12 ENSDARG00000102362 2773 0.814 - 0.814 - - - - - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
65. mrpl44 ENSDARG00000094277 1778 0.813 - 0.813 - - - - - - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
66. ggctb ENSDARG00000005085 704 0.812 - 0.812 - - - - - - - gamma-glutamylcyclotransferase b [Source:ZFIN;Acc:ZDB-GENE-040426-1939]
67. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 0.812 - 0.812 - - - - - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
68. surf4l ENSDARG00000035131 3648 0.811 - - - - - - 0.811 - - surfeit gene 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-172]
69. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 0.811 - - - - - - 0.811 - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
70. UACA UACA 1218 0.811 - 0.811 - - - - - - -
71. si:dkey-246i21.1 197 0.81 - 0.810 - - - - - - - si:dkey-246i21.1, transcript variant X2
72. tra2b ENSDARG00000002168 3218 0.81 - - - 0.810 - - - - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
73. rgma ENSDARG00000012248 2238 0.808 - 0.808 - - - - - - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
74. nmrk2 ENSDARG00000067848 10293 0.808 - 0.808 - - - - - - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
75. mmp14a ENSDARG00000002235 911 0.807 - - - - - 0.807 - - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
76. dpp9 ENSDARG00000052606 2279 0.807 - 0.807 - - - - - - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
77. srpk3 ENSDARG00000005916 1546 0.806 - 0.806 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
78. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 0.806 - - - - - 0.806 - - - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
79. dact1 ENSDARG00000101635 1303 0.805 - - - 0.805 - - - - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
80. ankra2 ENSDARG00000035399, ENSDARG00000111289 1303 0.804 - - - - - - 0.804 - - ankyrin repeat, family A (RFXANK-like), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2141]
81. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 0.804 - - - - - - 0.804 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
82. dnajb12b ENSDARG00000087473 3811 0.803 - - - - - - 0.803 - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
83. GIGYF1 1830 0.802 - - - - - - 0.802 - - GRB10 interacting GYF protein 1, transcript variant X6
84. grwd1 ENSDARG00000004806, ENSDARG00000109608 1567 0.802 - 0.802 - - - - - - - glutamate-rich WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9844]
85. SHISA2 1782 0.802 - - - - - 0.802 - - - shisa family member 2, transcript variant X2
86. ITGB1BP2 ENSDARG00000030176 2472 0.802 - 0.802 - - - - - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
87. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 0.802 - 0.802 - - - - - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
88. larp4aa ENSDARG00000078401 2526 0.801 - 0.801 - - - - - - - La ribonucleoprotein domain family, member 4Aa [Source:ZFIN;Acc:ZDB-GENE-090313-50]
89. zgc:66479 ENSDARG00000008732 3347 0.8 - 0.800 - - - - - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
90. CABZ01100187.1 CABZ01100187.1 191 0.8 - - - - - 0.800 - - -
91. lemd3 ENSDARG00000015824 2868 0.799 - - - 0.799 - - - - - LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
92. arfgap2 ENSDARG00000067601 6801 0.799 - - - - - - 0.799 - - ADP-ribosylation factor GTPase activating protein 2 [Source:ZFIN;Acc:ZDB-GENE-051120-177]
93. xrcc1 ENSDARG00000009494 1346 0.799 - - - - - - 0.799 - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
94. eef2l2 ENSDARG00000035256 6815 0.798 - 0.798 - - - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
95. trim33 ENSDARG00000016181 1718 0.798 - - - - - - 0.798 - - tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
96. PKN2 ENSDARG00000101293 358 0.798 - - - - - - 0.798 - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
97. si:dkeyp-55f12.3 ENSDARG00000042345 1812 0.798 - - - - - - 0.798 - - si:dkeyp-55f12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-118]
98. dnajc8 ENSDARG00000059373 1858 0.797 - 0.797 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
99. foxc1b ENSDARG00000055398 1499 0.797 - 0.797 - - - - - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
100. wnk1b ENSDARG00000039392 3587 0.797 - 0.797 - - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]

There are 608 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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