Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc40

Gene Name Gene ID Reads Annotation
ccdc40 ENSDARG00000100584, ENSDARG00000113983 167 coiled-coil domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-060503-723]










Genes with expression patterns similar to ccdc40

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc40 ENSDARG00000100584, ENSDARG00000113983 167 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-060503-723]
2. CABZ01039235.1 CABZ01039235.1 207 1.584 - 0.737 - - - 0.847 - - -
3. gtpbp2 272 1.54 0.764 0.776 - - - - - - - GTP binding protein 2
4. NOG NOG 324 1.534 - - - - - 0.716 0.818 - -
5. agpat9 agpat9 938 1.477 0.719 - - - - - 0.758 - -
6. BX890577.1 BX890577.1 257 1.476 - - - - 0.757 0.719 - - -
7. gpib ENSDARG00000103826 19 1.447 0.716 - - - - 0.731 - - - glucose-6-phosphate isomerase b [Source:ZFIN;Acc:ZDB-GENE-020513-3]
8. trmt6 ENSDARG00000042344 224 1.446 0.704 - - - - - 0.742 - - tRNA methyltransferase 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051120-141]
9. si:dkeyp-87a6.1 si:dkeyp-87a6.1 118 1.442 - - - - - 0.717 0.725 - -
10. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1.441 0.726 - - - - - 0.715 - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
11. CABZ01067072.1 CABZ01067072.1 17 1.44 0.725 - - - 0.715 - - - -
12. si:ch211-152p23.2 ENSDARG00000094519 4 1.435 0.725 - - - - - 0.710 - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
13. glipr2 ENSDARG00000041724 41 1.433 - - - - - 0.706 - 0.727 - GLI pathogenesis-related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4424]
14. wdyhv1 ENSDARG00000070403 42 1.432 - - - - 0.711 0.721 - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
15. si:dkey-3b8.4 si:dkey-3b8.4 13 1.426 0.725 - - - - - - 0.701 -
16. si:dkey-11c5.11 ENSDARG00000096637 130 0.948 0.948 - - - - - - - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
17. SGSM2 ENSDARG00000063307, ENSDARG00000110752 150 0.93 - 0.930 - - - - - - - small G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-131119-52]
18. FP245511.1 FP245511.1 247 0.911 0.911 - - - - - - - -
19. LOX LOX 7 0.891 - - - - - - - 0.891 -
20. mvd mvd 105 0.888 - - - - - - - 0.888 -
21. CCDC37 CCDC37 10 0.881 - - - - - - - 0.881 -
22. cog6 ENSDARG00000103149 39 0.879 0.879 - - - - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
23. si:ch211-278p9.1 ENSDARG00000087532 18 0.877 - - - - - - - 0.877 - si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
24. lrp1bb ENSDARG00000061517 172 0.877 0.877 - - - - - - - - low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
25. ints10 ENSDARG00000043031 455 0.873 - - - - - 0.873 - - - integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
26. si:ch211-209j12.4 si:ch211-209j12.4 43 0.872 - - - - - - - 0.872 -
27. st3gal1l ENSDARG00000079310 10 0.872 - - - - - - - 0.872 - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
28. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 0.863 - - - - - - 0.863 - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
29. TESK1 TESK1 109 0.86 - - - - - - 0.860 - -
30. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 0.859 - - - - - - - 0.859 -
31. soul4 ENSDARG00000101008 147 0.855 - 0.855 - - - - - - - heme-binding protein soul4 [Source:ZFIN;Acc:ZDB-GENE-110718-1]
32. postna ENSDARG00000043806 143 0.855 - 0.855 - - - - - - - periostin, osteoblast specific factor a [Source:ZFIN;Acc:ZDB-GENE-091113-23]
33. ofd1 ENSDARG00000000529 203 0.854 - 0.854 - - - - - - - oral-facial-digital syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5427]
34. noc3l ENSDARG00000002487 230 0.852 - - - - - - 0.852 - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
35. zeb1a ENSDARG00000016788 48 0.847 - 0.847 - - - - - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
36. si:dkey-78o7.6 si:dkey-78o7.6 137 0.846 - - - - - - 0.846 - -
37. btbd9 ENSDARG00000068983 356 0.846 - - - - - - 0.846 - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
38. nek8 ENSDARG00000045626, ENSDARG00000117017 67 0.844 - - - - - - - 0.844 - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
39. si:ch211-232d10.2 si:ch211-232d10.2 9 0.843 - - - - - - - 0.843 -
40. si:dkey-234k7.1 si:dkey-234k7.1 2 0.843 - - - - - - - 0.843 -
41. asb2a_1 asb2a_1 6 0.843 - - - - - - - 0.843 -
42. cx55.5 13 0.843 - - - - - - - 0.843 - connexin 55.5, transcript variant X1
43. DNAI1 DNAI1 11 0.843 - - - - - - - 0.843 -
44. BX294190.1 BX294190.1 17 0.843 - - - - - - - 0.843 -
45. si:dkey-30c15.2 ENSDARG00000069540, ENSDARG00000111398 3 0.843 - - - - - - - 0.843 - si:dkey-30c15.2 [Source:ZFIN;Acc:ZDB-GENE-060503-543]
46. C4H12orf55 C4H12orf55 14 0.843 - - - - - - - 0.843 -
47. badb ENSDARG00000054937, ENSDARG00000114609 11 0.843 - - - - - - - 0.843 - BCL2 associated agonist of cell death b [Source:ZFIN;Acc:ZDB-GENE-000616-1]
48. CR790368.1 ENSDARG00000100936 20 0.843 - - - - - - - 0.843 - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
49. trim35-29 ENSDARG00000055730 24 0.843 - - - - - - - 0.843 - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
50. BX470196.1 BX470196.1 9 0.843 - - - - - - - 0.843 -
51. rad51c ENSDARG00000068919 98 0.841 - - - - - - - 0.841 - RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204]
52. SAYSD1 SAYSD1 149 0.838 - - - - - - - 0.838 -
53. edn3b ENSDARG00000086669 8 0.835 - - - - - - - 0.835 - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
54. immp1l ENSDARG00000045935 175 0.835 - - - - - - 0.835 - - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
55. KIF3A ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 95 0.831 - - - - - - 0.831 - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
56. CABZ01066772.1 CABZ01066772.1 299 0.831 0.831 - - - - - - - -
57. paplnb ENSDARG00000042186 18 0.827 - - - - - - - 0.827 - papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
58. si:dkey-114b16.4 si:dkey-114b16.4 35 0.826 - - - - - - - 0.826 -
59. cdk15 ENSDARG00000006093 252 0.826 - - - - - - 0.826 - - cyclin-dependent kinase 15 [Source:ZFIN;Acc:ZDB-GENE-060421-7193]
60. ptk6a ENSDARG00000017947 682 0.824 - - - - - - - 0.824 - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
61. fbxo36b ENSDARG00000039152 7 0.824 - - - - - - - 0.824 - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
62. arhgef19 ENSDARG00000078853 17 0.824 - - - - - - - 0.824 - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
63. GRAMD1B_1 GRAMD1B_1 10 0.824 - - - - - - - 0.824 -
64. hspb7 ENSDARG00000104441 1417 0.823 - - - - - - 0.823 - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
65. IGFN1_1 IGFN1_1 29 0.822 - - - - - - - 0.822 -
66. ufd1l ENSDARG00000010051 893 0.822 - - - - - 0.822 - - - ubiquitin recognition factor in ER associated degradation 1 [Source:ZFIN;Acc:ZDB-GENE-040718-150]
67. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 0.822 - - - - - - - 0.822 - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
68. cftr ENSDARG00000041107, ENSDARG00000110312 56 0.821 0.821 - - - - - - - - cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:ZFIN;Acc:ZDB-GENE-050517-20]
69. sod2 ENSDARG00000042644 1382 0.82 - - - - - - 0.820 - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
70. C10H11orf63 C10H11orf63 65 0.819 - - - - - 0.819 - - -
71. znf711 ENSDARG00000071868, ENSDARG00000111963 75 0.819 - 0.819 - - - - - - - zinc finger protein 711 [Source:ZFIN;Acc:ZDB-GENE-081107-49]
72. ell ENSDARG00000000568 1404 0.819 - - - - - 0.819 - - - elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
73. atmin ENSDARG00000068601 24 0.818 - - - - - 0.818 - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
74. slc12a9 ENSDARG00000060366 293 0.818 - 0.818 - - - - - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
75. ppil6 ENSDARG00000042157 45 0.816 - - - - - - - 0.816 - peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
76. FP017194.1 FP017194.1 52 0.815 - - - - - - 0.815 - -
77. gig2p ENSDARG00000088260 5 0.815 - - - - - - - 0.815 - grass carp reovirus (GCRV)-induced gene 2p [Source:ZFIN;Acc:ZDB-GENE-070705-490]
78. WNT7A WNT7A 320 0.814 - - - - - - - 0.814 -
79. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 0.814 - - - - - - 0.814 - - plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
80. LAYN LAYN 94 0.813 - - - - - - - 0.813 -
81. nop16 ENSDARG00000044402 3645 0.812 - - - - - 0.812 - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
82. rab3db ENSDARG00000101534 45 0.81 0.810 - - - - - - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
83. lmo1 ENSDARG00000034504 260 0.81 0.810 - - - - - - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
84. FTCDNL1 FTCDNL1 224 0.809 - 0.809 - - - - - - -
85. si:dkey-56m15.5 ENSDARG00000103420 229 0.809 - - - - - 0.809 - - - si:dkey-56m15.5 [Source:ZFIN;Acc:ZDB-GENE-110913-134]
86. mlh3 ENSDARG00000056334 142 0.807 0.807 - - - - - - - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
87. cox5b2 ENSDARG00000068738 182 0.806 0.806 - - - - - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
88. nfatc3b ENSDARG00000051729 239 0.805 - 0.805 - - - - - - - nuclear factor of activated T cells 3b [Source:ZFIN;Acc:ZDB-GENE-100922-25]
89. CLIP4 ENSDARG00000096961 363 0.805 - 0.805 - - - - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
90. pacrg ENSDARG00000087556 25 0.805 - - - - - - - 0.805 - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
91. mir21-2 18 0.804 - - - - - - 0.804 - - microRNA 21-2
92. si:dkey-45d16.4 72 0.803 - - - - - - - 0.803 - si:dkey-45d16.4
93. gchfr ENSDARG00000098588 169 0.803 - 0.803 - - - - - - - GTP cyclohydrolase I feedback regulator [Source:ZFIN;Acc:ZDB-GENE-040426-1731]
94. SNX20 ENSDARG00000045554 77 0.803 - - - - - 0.803 - - - sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
95. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 0.802 0.802 - - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
96. si:dkey-18p12.4 ENSDARG00000079703 21 0.802 0.802 - - - - - - - - si:dkey-18p12.4 [Source:ZFIN;Acc:ZDB-GENE-070912-408]
97. gdf10b ENSDARG00000073891 116 0.802 - - - - - - - 0.802 - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
98. zgc:173713 17 0.802 0.802 - - - - - - - - zgc:173713, transcript variant X2
99. TP53BP2 TP53BP2 217 0.802 - 0.802 - - - - - - -
100. rrs1 ENSDARG00000003941 1257 0.801 - - - - - - 0.801 - - RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-9345]

There are 514 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA