Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc3

Gene Name Gene ID Reads Annotation
ccdc3 ccdc3 559










Genes with expression patterns similar to ccdc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc3 ccdc3 559 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. man1a1 ENSDARG00000005652 877 3.021 - 0.710 - 0.776 - - 0.762 0.773 - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
3. cyp2aa3 ENSDARG00000103347 880 2.521 - 0.860 - - - 0.789 0.872 - - cytochrome P450, family 2, subfamily AA, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-031030-8]
4. si:ch211-226m16.2 ENSDARG00000036785 2163 2.394 - 0.786 - - - - 0.780 - 0.828 si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
5. ppp1r13l ENSDARG00000013777 2260 2.329 0.751 - - - - 0.739 0.839 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
6. EPHA2 EPHA2 867 2.307 - - - - - 0.736 0.736 - 0.835
7. waslb ENSDARG00000006283 2160 2.285 - - - - - 0.781 0.762 0.742 - Wiskott-Aldrich syndrome-like b [Source:ZFIN;Acc:ZDB-GENE-040426-718]
8. rhbdf1 rhbdf1 1608 2.253 - - - - - 0.706 0.710 0.837 -
9. wu:fb17f05 wu:fb17f05 13622 2.222 - - - - 0.774 0.718 0.730 - -
10. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.844 - - - - - - - 0.934 0.910 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
11. MYO1D ENSDARG00000036863 768 1.832 - - - - - 0.899 - 0.933 - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
12. eve1 ENSDARG00000056012 144 1.829 - - - - 0.887 - - - 0.942 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
13. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.817 - - - - - - - 0.917 0.900 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
14. slc25a39 ENSDARG00000007449 630 1.779 - - - - - - - 0.883 0.896 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
15. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.777 - - - - - - - 0.865 0.912 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
16. si:dkey-15h14.4 si:dkey-15h14.4 118 1.764 - - - 0.819 - - - 0.945 -
17. and2 ENSDARG00000079302 20939 1.756 - - - - - 0.879 0.877 - - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
18. pelo ENSDARG00000055477 1927 1.756 - - - - - - - 0.904 0.852 pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
19. cplx4c ENSDARG00000094889 253 1.735 - - - 0.796 - - - 0.939 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
20. itgb1b.1 ENSDARG00000053232 4721 1.719 - - - - - 0.875 0.844 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
21. SLC27A2_1 SLC27A2_1 974 1.718 - - - - - 0.865 - - 0.853
22. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.717 - - - - - - - 0.898 0.819 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
23. ddx27 ENSDARG00000091831 1471 1.707 - - - - - - - 0.831 0.876 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
24. CSK ENSDARG00000067996 476 1.703 - 0.809 - - - - - 0.894 - C-terminal Src kinase [Source:ZFIN;Acc:ZDB-GENE-061103-493]
25. tcea2 ENSDARG00000012927 440 1.697 - 0.773 - - - - - - 0.924 transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985]
26. ap1s3b ENSDARG00000027966 1064 1.691 - - - - - 0.842 0.849 - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
27. zhx2 zhx2 365 1.687 - - - 0.753 - - - 0.934 -
28. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.683 - - - - - - 0.762 0.921 - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
29. cbr1l ENSDARG00000021149 1934 1.682 - - - - - 0.913 - 0.769 - carbonyl reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9642]
30. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.676 - - - - - 0.882 0.794 - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
31. smox ENSDARG00000036967 3816 1.676 - - - - - - 0.820 - 0.856 spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
32. cwc25 ENSDARG00000003382 2134 1.674 - - - - - - 0.790 0.884 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
33. rnf170 ENSDARG00000104069 838 1.674 - - - - - 0.766 - - 0.908 ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
34. CU633910.1 CU633910.1 828 1.673 - - - - - - 0.816 - 0.857
35. erbb3a ENSDARG00000006202 903 1.672 - - - - - 0.736 - - 0.936 erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
36. dhdhl ENSDARG00000028336 844 1.669 - 0.824 - - - - 0.845 - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
37. il21r il21r 74 1.669 - - - - 0.729 - - 0.940 -
38. C5H9orf78 C5H9orf78 1550 1.667 - - - - - - - 0.825 0.842
39. zdhhc3 zdhhc3 152 1.666 - - - - 0.717 - - 0.949 -
40. nxnl2 ENSDARG00000003934 386 1.662 0.750 - - - - - - - 0.912 nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
41. diabloa ENSDARG00000104172 2192 1.662 - - - - - 0.819 0.843 - - diablo, IAP-binding mitochondrial protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1303]
42. b3gnt2l ENSDARG00000068219 1875 1.661 - - - - - 0.799 0.862 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
43. CR848664.2 CR848664.2 876 1.66 - - - - - - 0.804 - 0.856
44. CABZ01080098.1 ENSDARG00000110680 10942 1.66 - - - - - - 0.810 - 0.850
45. mmp2 ENSDARG00000017676 2347 1.66 - - - - 0.780 - - - 0.880 matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
46. xrcc5_1 ENSDARG00000099298 1533 1.659 - - - - - - - 0.861 0.798 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
47. pon1 ENSDARG00000032496 1375 1.657 - - - - - - 0.804 - 0.853 paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
48. cx35.4 ENSDARG00000042866 685 1.655 - - - - - 0.765 - - 0.890 connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
49. lamp2 ENSDARG00000014914 5035 1.655 - - - - - 0.798 0.857 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
50. lsr ENSDARG00000099291 881 1.653 - - - - - - 0.738 - 0.915 lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
51. nek7 ENSDARG00000056966 816 1.652 - - - - - 0.908 0.744 - - NIMA-related kinase 7 [Source:ZFIN;Acc:ZDB-GENE-040801-136]
52. cyp2aa9 ENSDARG00000098890 839 1.651 - - - - - 0.877 0.774 - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
53. FBXO48 ENSDARG00000086184 110 1.65 - - - - 0.712 - - 0.938 - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
54. C5H9orf142 C5H9orf142 548 1.648 - - - - - 0.710 - 0.938 -
55. cd2ap ENSDARG00000015224 2830 1.644 - - - - - 0.834 0.810 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
56. si:ch73-52f15.5 ENSDARG00000095400 1368 1.643 - 0.779 - - - - 0.864 - - si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
57. bambia ENSDARG00000055381 2922 1.641 - - - - - 0.856 0.785 - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
58. armc7 ENSDARG00000061197 310 1.637 - 0.913 - 0.724 - - - - - armadillo repeat containing 7 [Source:ZFIN;Acc:ZDB-GENE-060929-288]
59. zgc:109868 zgc:109868 7474 1.636 - - - - - - 0.783 - 0.853
60. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 1.635 - - - - - 0.832 0.803 - - fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
61. cln3 ENSDARG00000037865 539 1.627 - - - - - 0.806 0.821 - - ceroid-lipofuscinosis, neuronal 3 [Source:ZFIN;Acc:ZDB-GENE-041114-174]
62. fn1b ENSDARG00000006526 9542 1.626 - - - - - 0.849 0.777 - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
63. si:ch211-203c7.2 si:ch211-203c7.2 885 1.625 - - - - 0.761 0.864 - - -
64. CABZ01074130.1 ENSDARG00000105274 26501 1.624 - - - - 0.767 - 0.857 - -
65. slu7 ENSDARG00000038870 1311 1.624 - - - - - 0.806 - - 0.818 SLU7 homolog, splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-62]
66. zgc:136410 ENSDARG00000102241 8433 1.623 - - - - - 0.859 0.764 - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
67. myo1eb ENSDARG00000009133, ENSDARG00000109491 2396 1.619 - - - - - - 0.823 - 0.796 myosin IE, b [Source:ZFIN;Acc:ZDB-GENE-040426-1347]
68. pnpla7b ENSDARG00000040002 1217 1.617 - - - - - - - 0.717 0.900 patatin-like phospholipase domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-050309-66]
69. adpgk2 ENSDARG00000062785 8229 1.616 - - - - - 0.801 - - 0.815 ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
70. rac2 ENSDARG00000038010 5837 1.613 - - - - - - 0.808 - 0.805 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
71. cst3 ENSDARG00000007795 13753 1.609 - - - - - 0.847 0.762 - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
72. mafbb ENSDARG00000070542, ENSDARG00000099120 1317 1.608 - - - - - 0.736 0.872 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Bb [Source:ZFIN;Acc:ZDB-GENE-010605-4]
73. sorbs3 ENSDARG00000037476 511 1.608 - - - - - 0.742 - - 0.866 sorbin and SH3 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-1]
74. LIMD2 ENSDARG00000078092 3414 1.608 - - - - - 0.829 0.779 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
75. osbpl7 ENSDARG00000012981, ENSDARG00000112388 1507 1.605 - - - - - 0.729 0.876 - - oxysterol binding protein-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-212]
76. TMC6 TMC6 773 1.605 - 0.764 - - - - 0.841 - -
77. serpind1 ENSDARG00000021208 665 1.602 - - - - - 0.787 0.815 - - serpin peptidase inhibitor, clade D (heparin cofactor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030711-2]
78. vtnb ENSDARG00000053831 2364 1.601 - - - - - 0.807 0.794 - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
79. SGPP1 ENSDARG00000060534 1802 1.601 - - - - - 0.710 - - 0.891 sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
80. pcbd1 ENSDARG00000031981 3373 1.6 - - - - - 0.714 0.886 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
81. apom ENSDARG00000076838 4732 1.6 - - - - - 0.774 0.826 - - apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
82. amotl2b ENSDARG00000061948 974 1.599 - - - - - 0.706 - - 0.893 angiomotin like 2b [Source:ZFIN;Acc:ZDB-GENE-061103-307]
83. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 1.597 - - - - - 0.704 0.893 - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
84. piezo1 ENSDARG00000076870 4704 1.597 - - - - - - 0.747 - 0.850 piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
85. ctsh ENSDARG00000041108 2873 1.597 - - - - - 0.785 0.812 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
86. asap2b ENSDARG00000019564 1660 1.596 - - - - - 0.880 0.716 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
87. cdc42ep4b ENSDARG00000045036 1295 1.594 - - - - - 0.845 - 0.749 - CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
88. psph ENSDARG00000040314 1359 1.594 - - - - - - 0.700 - 0.894 phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
89. ctsll ENSDARG00000011701, ENSDARG00000112885 6970 1.591 - - - - - 0.785 0.806 - - cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
90. depdc7 232 1.591 - - - 0.837 - 0.754 - - - DEP domain containing 7, transcript variant X1
91. ctsla ENSDARG00000007836 67814 1.59 - - - - - 0.837 0.753 - - cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
92. f10 ENSDARG00000088581 4968 1.59 - - - - - 0.831 0.759 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
93. bambib ENSDARG00000099677 4267 1.589 - - - - - 0.744 0.845 - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
94. yif1a ENSDARG00000019636 2215 1.586 - - - - - - 0.768 - 0.818 Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
95. mical1 ENSDARG00000011809 586 1.582 - - - - - 0.723 - - 0.859 microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081022-3]
96. mmp14b ENSDARG00000008388, ENSDARG00000111313 2125 1.579 - - - - - 0.780 - - 0.799 matrix metallopeptidase 14b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-2]
97. fn1 fn1 2538 1.578 - - - - 0.834 0.744 - - -
98. tmem59 ENSDARG00000019033 2692 1.577 - - - - - 0.726 - - 0.851 transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
99. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.574 - - - - - 0.813 0.761 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
100. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.572 - - - - - 0.759 0.813 - - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]

There are 1962 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA