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Results for ccdc28b

Gene Name Gene ID Reads Annotation
ccdc28b ENSDARG00000011222 528 coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]










Genes with expression patterns similar to ccdc28b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc28b ENSDARG00000011222 528 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
2. her4.1 ENSDARG00000056732 1264 3.837 0.834 - - 0.765 - 0.702 0.742 0.794 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
3. nrarpb ENSDARG00000018958 6225 3.367 0.835 - - - 0.917 0.757 0.858 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
4. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.336 0.755 - - - 0.973 0.822 0.786 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
5. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 3.298 0.739 - - - 0.973 0.772 0.814 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
6. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 3.253 0.842 - - - 0.783 - 0.858 0.770 - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
7. amph ENSDARG00000007663 599 3.024 0.753 - - - - 0.706 0.854 0.711 - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
8. mllt11 ENSDARG00000071026 2518 3.006 0.759 - - - - 0.710 0.818 0.719 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
9. zic5 ENSDARG00000016022 1034 2.678 - - - - 0.982 0.863 0.833 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
10. atp6v0cb ENSDARG00000036577 3472 2.609 0.757 - - - 0.975 - 0.877 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
11. pkib ENSDARG00000053110 527 2.563 0.849 - - - - 0.828 0.886 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
12. nefma ENSDARG00000021351 790 2.541 0.826 - - - 0.998 0.717 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
13. CT030046.1 CT030046.1 190 2.51 0.872 - - - - 0.880 0.758 - -
14. prph ENSDARG00000028306 242 2.506 0.914 - - - - 0.790 0.802 - - peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]
15. cnrip1a ENSDARG00000091683 1491 2.505 - - - - - 0.807 0.860 0.838 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
16. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 2.485 0.721 - - - 0.982 - 0.782 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
17. rgs20 ENSDARG00000038859 331 2.482 - 0.775 - - - 0.859 0.848 - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
18. mapk12b ENSDARG00000006409 2246 2.477 0.757 - - - - 0.856 0.864 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
19. TUSC5_1 TUSC5_1 320 2.476 0.713 - - - 0.996 0.767 - - -
20. st18 663 2.475 - - - - - 0.833 0.785 0.857 - suppression of tumorigenicity 18, zinc finger
21. si:ch73-21g5.7 ENSDARG00000093156 9412 2.473 - - - - - 0.852 0.853 0.768 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
22. marcksa ENSDARG00000004049 2518 2.465 - - - - 0.943 - 0.773 0.749 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
23. ADAM22 ENSDARG00000060532 2259 2.459 - - - - - 0.831 0.839 0.789 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
24. irx5b ENSDARG00000074070 459 2.452 0.897 - - - - 0.763 0.792 - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
25. hmp19 2554 2.447 0.864 - - - - 0.791 0.792 - - HMP19 protein
26. scn1lab ENSDARG00000062744 155 2.433 0.764 - - - - 0.827 0.842 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
27. plp1a ENSDARG00000103732 3544 2.432 0.799 - - - - 0.799 0.834 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
28. pou3f2a ENSDARG00000070220 817 2.414 - - - - - - 0.872 0.804 0.738 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
29. slc17a6b ENSDARG00000041150 823 2.412 0.829 - - - - 0.710 0.873 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
30. gfap ENSDARG00000025301 5584 2.399 0.808 - - - - 0.741 0.850 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
31. clstn3 ENSDARG00000073883 590 2.398 0.707 0.884 - - - - 0.807 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
32. lhx5 ENSDARG00000057936 785 2.396 - - - - - 0.779 0.776 0.841 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
33. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.396 0.868 - - - - 0.767 0.761 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
34. fez1 ENSDARG00000023174 701 2.394 - - - - - 0.804 0.793 0.797 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
35. calm1a ENSDARG00000021811 4791 2.393 - - - - 0.893 0.710 0.790 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
36. RPH3A RPH3A 309 2.393 0.810 - - - - 0.770 0.813 - -
37. stmn1b ENSDARG00000033655 9491 2.39 0.740 - - - - 0.818 0.832 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
38. adarb1a ENSDARG00000041609 476 2.385 - 0.720 - - - 0.792 0.873 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
39. irx1b ENSDARG00000056594 2224 2.384 0.767 - - - - 0.729 0.888 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
40. DTX4 ENSDARG00000076302 2642 2.382 0.832 - - - - 0.776 0.774 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
41. lrrc4.1 ENSDARG00000069402 323 2.382 0.809 - - - - 0.707 0.866 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
42. SBK1 SBK1 154 2.372 0.843 - - - - - 0.789 0.740 -
43. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 2.372 - - - - 0.858 - - 0.781 0.733 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
44. MAP6 MAP6 643 2.369 0.820 - - - - 0.749 0.800 - -
45. tox ENSDARG00000032317 9126 2.368 0.845 - - - - - 0.802 - 0.721 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
46. CYTH2 ENSDARG00000028800 2349 2.368 - - - - - 0.834 0.791 - 0.743 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
47. sox21b ENSDARG00000008540 1460 2.368 0.789 - - - - - 0.854 0.725 - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
48. tuba1c ENSDARG00000055216 8384 2.363 0.787 - - - - 0.720 0.856 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
49. KCNIP4 ENSDARG00000088100 86 2.36 0.736 - - - - 0.762 0.862 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
50. bsk146 ENSDARG00000099069 274 2.354 0.783 - - - - 0.790 0.781 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
51. st8sia2 ENSDARG00000018788 2183 2.347 0.718 - - - - 0.847 0.782 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
52. prdm12b ENSDARG00000007430 914 2.343 0.811 - - - - 0.735 0.797 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
53. st8sia5 ENSDARG00000036584 529 2.34 0.791 - - - - 0.803 0.746 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
54. C7H4orf48 C7H4orf48 1455 2.331 - - - - - 0.782 0.775 0.774 -
55. hoxc4a ENSDARG00000070338 1382 2.329 0.734 0.788 - - - - 0.807 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
56. rcor2 ENSDARG00000008278 1678 2.327 - - - - - 0.760 0.755 0.812 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
57. sox2 ENSDARG00000070913 2763 2.325 0.740 - - - - 0.809 0.776 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
58. b4galt2 ENSDARG00000077994 480 2.321 0.827 - - - - 0.754 0.740 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
59. clvs2 ENSDARG00000053122 1390 2.318 0.746 - - - - - 0.801 0.771 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
60. mex3b ENSDARG00000058369 1867 2.316 - - - - - 0.740 0.865 0.711 - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
61. bhlhe22 ENSDARG00000058039 1673 2.315 0.723 - - - - - 0.866 0.726 - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
62. syt11a ENSDARG00000057913 1145 2.314 0.706 - - - - 0.804 0.804 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
63. adcyap1b ENSDARG00000027740 1539 2.309 - - - - - 0.741 0.836 0.732 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
64. tmem35 ENSDARG00000052567 5685 2.309 0.710 - - - 0.735 - 0.864 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
65. olfm1b ENSDARG00000014053 1392 2.307 0.801 - - - - 0.706 0.800 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
66. dbx1a ENSDARG00000086393 3161 2.307 0.841 - - - 0.710 - 0.756 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
67. CU928222.1 ENSDARG00000097436 1662 2.301 0.750 - - - - 0.704 0.847 - -
68. lrp11 ENSDARG00000034076 313 2.299 - 0.767 - - - 0.729 0.803 - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
69. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.296 - - - - - 0.709 0.766 0.821 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
70. ppp2r2ba 321 2.291 0.725 - - - - 0.816 0.750 - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
71. slc32a1 ENSDARG00000059775 1092 2.289 0.706 - - - - 0.763 0.820 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
72. fsd1 ENSDARG00000062017 207 2.289 0.818 - - - - - 0.748 0.723 - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
73. EFCC1 ENSDARG00000077826 1359 2.285 0.746 - - - - 0.719 0.820 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
74. ebf3 ebf3 4238 2.284 0.714 0.783 - - - - 0.787 - -
75. atp6ap1a ENSDARG00000041417 898 2.275 0.701 - - - - 0.835 0.739 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
76. her4.3 ENSDARG00000070770 613 2.267 - - - - - - 0.764 0.768 0.735 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
77. cacng8b ENSDARG00000070626 176 2.261 0.773 - - - - 0.705 0.783 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
78. sncgb ENSDARG00000109715 1014 2.248 0.721 - - - - 0.757 0.770 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
79. kcnj11l ENSDARG00000031438 369 2.246 0.723 - - - - 0.779 0.744 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
80. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 2.244 0.704 - - - - 0.736 0.804 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
81. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 2.237 - - - - - 0.785 0.747 0.705 - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
82. snap25a ENSDARG00000020609 4537 2.231 0.726 - - - - 0.705 0.800 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
83. vsnl1a ENSDARG00000023228 1584 2.227 0.736 - - - - 0.761 0.730 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
84. ric8a ENSDARG00000007247 229 2.225 0.712 - - - - 0.770 0.743 - - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
85. atp6v0a2a ENSDARG00000035538 278 2.223 0.761 - - - - 0.719 0.743 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
86. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.184 0.704 - - - - 0.703 0.777 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
87. ephb3a ENSDARG00000031548 1872 2.164 - - - - 0.732 - 0.732 0.700 - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
88. si:ch211-278j3.3 ENSDARG00000020284 478 2.159 0.704 - - - - 0.728 0.727 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
89. UBE2QL1 ENSDARG00000079276 3474 1.838 - - - - 0.985 - 0.853 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
90. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 1.832 - - - - 0.993 - 0.839 - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
91. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.814 - - - - 0.973 - 0.841 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
92. msi1 ENSDARG00000010710 2634 1.801 - - - - 0.894 - 0.907 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
93. odz4 odz4 822 1.786 - - - - 0.992 - 0.794 - -
94. GJD2 GJD2 1351 1.785 0.919 - - - - - 0.866 - -
95. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.783 - - - - 0.947 0.836 - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
96. C24H17orf96 C24H17orf96 1538 1.777 - - - - 0.971 - 0.806 - -
97. TUBB8P7_1 TUBB8P7_1 2722 1.759 - - - - 0.981 - 0.778 - -
98. meis2b ENSDARG00000077840 5166 1.753 - - - - 0.826 - 0.927 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
99. UNKL ENSDARG00000037838 1086 1.75 - - - - 0.966 0.784 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
100. trim3a ENSDARG00000063711 44 1.745 0.856 0.889 - - - - - - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]

There are 2138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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