Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ccdc28a

Gene Name Gene ID Reads Annotation
ccdc28a ENSDARG00000022983, ENSDARG00000091471 1449 coiled-coil domain containing 28A [Source:ZFIN;Acc:ZDB-GENE-030131-5007]










Genes with expression patterns similar to ccdc28a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc28a ENSDARG00000022983, ENSDARG00000091471 1449 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 28A [Source:ZFIN;Acc:ZDB-GENE-030131-5007]
2. rab11al ENSDARG00000014340 2116 2.49 0.772 0.864 - - - 0.854 - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
3. sirt2 ENSDARG00000011488 5389 2.289 - 0.806 - - - 0.720 0.763 - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
4. caspb ENSDARG00000052039 4329 1.784 - 0.890 - - - 0.894 - - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
5. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 1.745 0.819 0.926 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
6. cmasb 499 1.719 - 0.944 - - - 0.775 - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
7. eppk1 ENSDARG00000096359 4315 1.707 - 0.831 - - - 0.876 - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
8. hdac4 ENSDARG00000098349 1370 1.686 - - - - - 0.868 0.818 - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
9. afap1 ENSDARG00000055284 730 1.682 - 0.908 - - - 0.774 - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
10. fam105bb fam105bb 1253 1.678 - 0.934 - - - 0.744 - - -
11. si:dkeyp-13a3.10 ENSDARG00000092225 1054 1.663 - 0.932 - - - 0.731 - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
12. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.66 - 0.904 - - - 0.756 - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
13. RAPGEFL1 ENSDARG00000079912 1074 1.66 - 0.837 - - - 0.823 - - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
14. tmem238 tmem238 1403 1.657 - 0.802 - - - 0.855 - - -
15. grk5 ENSDARG00000032801 490 1.641 - 0.915 - - - 0.726 - - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
16. sptssa ENSDARG00000071203 2306 1.628 - 0.808 - - - 0.820 - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
17. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 1.621 - 0.889 - - - 0.732 - - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
18. aim1b 1360 1.617 0.828 - - - - 0.789 - - - crystallin beta-gamma domain containing 1b
19. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.616 - - - - - 0.842 0.774 - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
20. wdfy4 ENSDARG00000077009 802 1.615 - 0.875 - - - 0.740 - - - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
21. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 1.615 0.767 - - - - 0.848 - - - vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
22. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.61 - - - - - 0.834 0.776 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
23. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.61 - 0.907 - - - 0.703 - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
24. unc93a ENSDARG00000041554 427 1.608 - 0.890 - - - 0.718 - - - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
25. elovl6l ENSDARG00000038639 1184 1.6 - 0.827 - - - 0.773 - - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
26. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.592 - 0.858 - - - 0.734 - - -
27. fryl ENSDARG00000040001 3256 1.589 - - - - - 0.861 0.728 - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
28. acat1 ENSDARG00000045888 1488 1.587 - 0.788 - - - 0.799 - - - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
29. anxa3a ENSDARG00000009196, ENSDARG00000112919 2143 1.585 0.723 - - - - 0.862 - - - annexin A3a [Source:ZFIN;Acc:ZDB-GENE-040912-58]
30. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.583 - - - - - 0.796 0.787 - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
31. nrp2b ENSDARG00000038446 783 1.578 - 0.844 - - - - 0.734 - - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
32. tmem50a ENSDARG00000015757 3244 1.574 - 0.814 - - - 0.760 - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
33. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.572 - - - - - 0.757 0.815 - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
34. si:ch211-232i5.3 ENSDARG00000086874 1256 1.569 - 0.768 - - - 0.801 - - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
35. prkar1aa ENSDARG00000076128 6565 1.569 - - - - - 0.820 0.749 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
36. bhlhe40 ENSDARG00000004060 2107 1.568 - 0.765 - - - 0.803 - - - basic helix-loop-helix family, member e40 [Source:ZFIN;Acc:ZDB-GENE-030131-3133]
37. eml2 ENSDARG00000008808 706 1.564 - 0.817 - - - 0.747 - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
38. ufc1 ENSDARG00000022340 2618 1.56 - 0.703 - - - 0.857 - - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
39. xkrx ENSDARG00000044011 1788 1.559 - - - - - 0.744 0.815 - - XK related X-linked [Source:ZFIN;Acc:ZDB-GENE-041114-108]
40. CARKD 1398 1.558 - 0.800 - - - 0.758 - - - carbohydrate kinase domain containing, transcript variant X7
41. arhgap10 ENSDARG00000078326 994 1.556 - - - - - 0.779 0.777 - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
42. sc:d173 sc:d173 1279 1.552 - 0.819 - - - 0.733 - - -
43. lrba ENSDARG00000031108 2136 1.536 0.771 - - - - 0.765 - - - LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
44. tbl1xr1b ENSDARG00000008966 2203 1.519 - 0.801 - - - 0.718 - - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
45. maff ENSDARG00000028957, ENSDARG00000111050 1809 1.517 - - - - - 0.762 0.755 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F [Source:ZFIN;Acc:ZDB-GENE-040426-1280]
46. cdc20 ENSDARG00000100741 3264 1.517 - 0.784 - - - 0.733 - - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
47. rnf128a ENSDARG00000016867 3146 1.506 - - - - - 0.801 - - 0.705 ring finger protein 128a [Source:ZFIN;Acc:ZDB-GENE-030131-1044]
48. ap3s2 ENSDARG00000039882 2149 1.499 - 0.755 - - - 0.744 - - - adaptor related protein complex 3 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-040718-274]
49. cmc1 ENSDARG00000103670 1197 1.49 - 0.772 - - - - 0.718 - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
50. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 1.485 - 0.760 - - - - 0.725 - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
51. phyhd1 ENSDARG00000029905 1394 1.473 - 0.758 - - - - 0.715 - - phytanoyl-CoA dioxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-159]
52. mapk13 ENSDARG00000058470 1001 1.473 - 0.771 - - - 0.702 - - - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
53. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.465 - - - - - 0.750 0.715 - - ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
54. xpot ENSDARG00000099652 3026 1.465 - 0.704 - - - 0.761 - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
55. si:dkey-199f5.8 ENSDARG00000018853 3249 1.453 - - - - - 0.743 0.710 - - si:dkey-199f5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-4733]
56. fgfr2 ENSDARG00000058115 6743 1.448 - - - - - 0.732 0.716 - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
57. ch1073-291c23.1 2426 1.439 - - - - - 0.711 0.728 - - ch1073-291c23.1, transcript variant X6
58. C20H6orf58 C20H6orf58 1105 1.433 0.706 0.727 - - - - - - -
59. zfp36l1a ENSDARG00000016154 4305 1.433 - - - - - 0.724 0.709 - - zinc finger protein 36, C3H type-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9860]
60. soul2 ENSDARG00000039499 1469 0.954 - - - - - 0.954 - - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
61. lama5 ENSDARG00000058543 2782 0.939 - - - - - 0.939 - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
62. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.936 - 0.936 - - - - - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
63. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.935 - 0.935 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
64. cyp2aa1 ENSDARG00000099003 297 0.935 - 0.935 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
65. cflara ENSDARG00000055966 464 0.934 - 0.934 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
66. si:dkey-114b16.4 si:dkey-114b16.4 35 0.934 - 0.934 - - - - - - -
67. myhz1.2 ENSDARG00000067995 29117 0.934 - 0.934 - - - - - - - myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
68. CR376783.1 ENSDARG00000074235 259 0.932 - 0.932 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
69. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.932 - 0.932 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
70. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.932 - 0.932 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
71. kcnk13a ENSDARG00000008212 136 0.932 - 0.932 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
72. C12H10orf2 C12H10orf2 245 0.931 - 0.931 - - - - - - -
73. IKZF2 ENSDARG00000069111 1366 0.931 - 0.931 - - - - - - - IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
74. BX005085.1 ENSDARG00000089947 230 0.931 - 0.931 - - - - - - -
75. usp45 ENSDARG00000075013 227 0.931 - 0.931 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
76. CABZ01066717.1 CABZ01066717.1 351 0.931 - 0.931 - - - - - - -
77. smdt1 smdt1 99 0.93 - 0.930 - - - - - - -
78. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.93 - 0.930 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
79. fam63b 484 0.93 - 0.930 - - - - - - - family with sequence similarity 63, member B
80. ZP2 ZP2 14 0.929 - 0.929 - - - - - - -
81. si:ch211-39a7.1 ENSDARG00000037427 31 0.929 - 0.929 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
82. dirc2 ENSDARG00000009783 484 0.929 - 0.929 - - - - - - - disrupted in renal carcinoma 2 [Source:ZFIN;Acc:ZDB-GENE-040912-167]
83. si:ch1073-155h21.1 ENSDARG00000007582 137 0.929 - 0.929 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
84. CABZ01109624.1 CABZ01109624.1 25 0.929 - 0.929 - - - - - - -
85. U3_5 U3_5 67 0.929 - 0.929 - - - - - - -
86. ppapdc2 ppapdc2 67 0.929 - 0.929 - - - - - - -
87. si:dkey-228i19.34 si:dkey-228i19.34 43 0.929 - 0.929 - - - - - - -
88. SLC38A9 ENSDARG00000032769 35 0.928 - 0.928 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
89. alg9 ENSDARG00000012840 631 0.928 - 0.928 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
90. trmt1l ENSDARG00000042057 466 0.928 - 0.928 - - - - - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
91. si:dkey-154p10.3 ENSDARG00000068366 153 0.928 - 0.928 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
92. pgap2 ENSDARG00000044596 60 0.928 - 0.928 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
93. MAP3K2 ENSDARG00000062884 34 0.928 - 0.928 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
94. CABZ01114089.1 CABZ01114089.1 127 0.927 - 0.927 - - - - - - -
95. rnf34a ENSDARG00000038300 179 0.927 - 0.927 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
96. CT573322.1 CT573322.1 38 0.927 - 0.927 - - - - - - -
97. cd74a ENSDARG00000009087 20 0.927 - 0.927 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
98. si:ch211-105d18.6 si:ch211-105d18.6 59 0.927 - 0.927 - - - - - - -
99. casp3b ENSDARG00000055045 54 0.926 - 0.926 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
100. TM2D2 ENSDARG00000035515 561 0.926 - 0.926 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]

There are 999 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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