Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ccdc25

Gene Name Gene ID Reads Annotation
ccdc25 ENSDARG00000021753 3837 coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]










Genes with expression patterns similar to ccdc25

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc25 ENSDARG00000021753 3837 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
2. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 2.512 - 0.735 0.997 - - - 0.780 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
3. vapal ENSDARG00000115862 3108 2.511 0.775 - 0.997 - - - 0.739 - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
4. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 2.183 - 0.726 - 0.755 - - 0.702 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
5. si:ch211-152p11.4 ENSDARG00000079705 2341 1.991 - - 0.997 0.994 - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
6. si:rp71-45k5.4 ENSDARG00000035679 10411 1.972 - - 0.994 0.978 - - - - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
7. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.934 - - 0.983 - - 0.951 - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
8. bc2 5213 1.91 - - 0.998 - - 0.912 - - - putative breast adenocarcinoma marker
9. tfam ENSDARG00000063145 4524 1.896 - - - 0.984 - 0.912 - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
10. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 1.894 - - 0.983 0.911 - - - - -
11. chtopa ENSDARG00000057234 3287 1.885 - - - 0.994 - 0.891 - - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
12. bcar1 ENSDARG00000056525 6563 1.866 - - - 0.983 - 0.883 - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
13. tspan18b ENSDARG00000015015 1433 1.837 - - - 0.996 - 0.841 - - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
14. hat1 ENSDARG00000034916 5712 1.774 0.781 - 0.993 - - - - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
15. anxa1c ENSDARG00000104359 23181 1.75 - - - 0.936 - 0.814 - - - annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
16. rwdd ENSDARG00000068256 964 1.748 0.778 - - - - 0.970 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
17. anapc16 ENSDARG00000013822 5857 1.747 - - - 0.966 - - 0.781 - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
18. mif ENSDARG00000071336 1328 1.736 - 0.771 - - - 0.965 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
19. gdap1l1 ENSDARG00000028628 233 1.729 0.765 - - - - 0.964 - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
20. pygma ENSDARG00000055518 15972 1.722 - 0.757 0.965 - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
21. scamp2 ENSDARG00000010279 2325 1.71 - - 0.938 - - 0.772 - - - secretory carrier membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2702]
22. prep ENSDARG00000057151 3016 1.706 - - - 0.990 - 0.716 - - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
23. ptp4a1 ENSDARG00000006242 10267 1.7 - - - 0.941 - - 0.759 - - protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
24. cldnf ENSDARG00000043133 1006 1.682 0.744 - - - - 0.938 - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
25. grp ENSDARG00000043074 747 1.681 0.732 - - - - 0.949 - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
26. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.679 - - - - - 0.925 0.754 - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
27. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.676 - 0.702 0.974 - - - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
28. dnajc5ga ENSDARG00000041896 1478 1.674 - - - - - 0.910 0.764 - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
29. phf14 ENSDARG00000061458 492 1.673 0.729 - - - - 0.944 - - - PHD finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-1796]
30. magt1 ENSDARG00000058062 3903 1.667 0.756 - - - - 0.911 - - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
31. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.666 - 0.771 - - - 0.895 - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
32. si:ch211-264e16.1 ENSDARG00000068947 1358 1.66 0.780 - - - - 0.880 - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
33. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.658 - 0.801 - - - 0.857 - - - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
34. C2H6orf52 C2H6orf52 2847 1.656 - 0.722 - - - 0.934 - - -
35. vta1 ENSDARG00000013732 6072 1.656 0.827 - - - - 0.829 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
36. serp1 ENSDARG00000099439 23682 1.654 - - - 0.927 - 0.727 - - - stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
37. ptp4a3 ENSDARG00000039997 1964 1.653 - 0.803 - - - 0.850 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
38. me3 ENSDARG00000002305 3305 1.648 - - - - - 0.850 0.798 - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
39. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.644 - 0.721 - - - 0.923 - - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
40. TNRC6A ENSDARG00000079688 14433 1.642 - - - 0.922 - - 0.720 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
41. dchs1b ENSDARG00000079850 831 1.64 - - - - - 0.928 0.712 - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
42. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 1.637 - - - - - 0.924 0.713 - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
43. knop1 ENSDARG00000077721 2198 1.629 - 0.819 - - - 0.810 - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
44. akirin2 ENSDARG00000058729 13245 1.625 0.848 - - - - - 0.777 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
45. si:dkey-169i5.4 ENSDARG00000077862 511 1.618 0.743 - - - - 0.875 - - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
46. slc39a7 ENSDARG00000104451 6368 1.61 - - - - - 0.886 0.724 - - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
47. TIMM22 ENSDARG00000091413 957 1.609 0.841 0.768 - - - - - - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
48. ppapdc1b ppapdc1b 2866 1.609 - - - - - 0.865 - - 0.744
49. ccnk ENSDARG00000034146 1255 1.601 0.720 - - - - 0.881 - - - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
50. gpx7 ENSDARG00000091511 3045 1.597 - 0.762 - - - 0.835 - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
51. ube2f ENSDARG00000025754 1946 1.589 0.825 - - - - - 0.764 - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
52. CARKD 1398 1.584 0.827 - - - - 0.757 - - - carbohydrate kinase domain containing, transcript variant X7
53. lypla2 ENSDARG00000053656 8971 1.577 0.784 - - - - - 0.793 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
54. brd8 ENSDARG00000025071 2605 1.569 - 0.713 - - - 0.856 - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
55. srpk3 ENSDARG00000005916 1546 1.562 - 0.733 - - - 0.829 - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
56. tom1 ENSDARG00000104581 1457 1.555 0.702 - - - - 0.853 - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
57. eif2s1a ENSDARG00000005827 5992 1.549 0.730 - - - - 0.819 - - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
58. lyrm4 ENSDARG00000078352 2245 1.544 0.824 - - - - - 0.720 - - LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]
59. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.538 0.708 - - - - 0.830 - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
60. suz12a ENSDARG00000070256 2229 1.533 0.827 0.706 - - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
61. ajuba ENSDARG00000077842 1152 1.53 0.774 - - - - 0.756 - - - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
62. snrnp70 ENSDARG00000077126 5921 1.528 0.823 0.705 - - - - - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
63. COL13A1 1565 1.525 0.797 0.728 - - - - - - - collagen, type XIII, alpha 1, transcript variant X1
64. nr2f6b ENSDARG00000003165 5855 1.524 0.806 0.718 - - - - - - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
65. eef1db ENSDARG00000030053 5185 1.512 0.779 - - - - - 0.733 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
66. PTS ENSDARG00000045269 2185 1.511 - 0.804 - - - 0.707 - - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
67. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.506 0.784 - - - - - 0.722 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
68. krr1 ENSDARG00000011246 1624 1.503 0.800 0.703 - - - - - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
69. map3k7 ENSDARG00000020469 2845 1.498 0.763 - - - - - 0.735 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
70. ppig ENSDARG00000044431 3427 1.497 - - - - - 0.753 0.744 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
71. fkbp3 ENSDARG00000098059 5428 1.496 - - - - - 0.763 0.733 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
72. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.493 0.789 0.704 - - - - - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
73. TSPAN4 TSPAN4 941 1.492 - 0.724 - - - 0.768 - - -
74. gstm gstm 4064 1.492 - 0.718 - - - 0.774 - - -
75. bysl ENSDARG00000001057 2621 1.483 0.745 - - - - - 0.738 - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
76. mrpl44 ENSDARG00000094277 1778 1.463 - 0.751 - - - - 0.712 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
77. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.462 0.709 - - - - 0.753 - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
78. nucks1b ENSDARG00000012777 4468 1.46 - 0.702 - - - - 0.758 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
79. nedd8 ENSDARG00000007989 3896 1.459 - - - - - 0.714 0.745 - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
80. slc20a1b ENSDARG00000010641 2564 1.446 - - - - - 0.707 0.739 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
81. meis2b ENSDARG00000077840 5166 1.445 0.701 - - - - 0.744 - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
82. adam17a ENSDARG00000043213 1305 1.443 - 0.729 - - - 0.714 - - - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
83. mars ENSDARG00000034396 3618 1.443 - 0.734 - - - - 0.709 - - methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
84. tmem70 ENSDARG00000078773 1290 1.442 - 0.716 - - - - 0.726 - - transmembrane protein 70 [Source:ZFIN;Acc:ZDB-GENE-070912-593]
85. psmd11a ENSDARG00000060150 4529 0.999 - - 0.999 - - - - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
86. prkag3b ENSDARG00000000369 1945 0.998 - - 0.998 - - - - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
87. CU695232.1 ENSDARG00000098286 1266 0.998 - - 0.998 - - - - - - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
88. C13H10orf11 1209 0.998 - - 0.998 - - - - - - c13h10orf11 homolog (H. sapiens), transcript variant X2
89. btbd2 btbd2 1296 0.998 - - 0.998 - - - - - -
90. mtor ENSDARG00000053196 2156 0.998 - - 0.998 - - - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
91. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.998 - - 0.998 - - - - - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
92. ddah2 ENSDARG00000105009 4570 0.997 - - 0.997 - - - - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
93. mknk2b ENSDARG00000015164 2158 0.997 - - 0.997 - - - - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
94. igf2bp2a ENSDARG00000003421 2810 0.997 - - 0.997 - - - - - - insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
95. CPAMD8 ENSDARG00000056530 3481 0.997 - - 0.997 - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
96. mphosph10 ENSDARG00000012495 1679 0.997 - - - 0.997 - - - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
97. CT485993.2 CT485993.2 1419 0.997 - - 0.997 - - - - - -
98. tbcela ENSDARG00000002682 1179 0.997 - - 0.997 - - - - - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
99. sdad1 ENSDARG00000105117 2819 0.997 - - 0.997 - - - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
100. ITFG3 ITFG3 1803 0.997 - - 0.997 - - - - - -

There are 1564 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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