Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc22

Gene Name Gene ID Reads Annotation
ccdc22 ENSDARG00000052379 2276 coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]










Genes with expression patterns similar to ccdc22

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc22 ENSDARG00000052379 2276 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
2. RAPGEF2 ENSDARG00000005482 2068 1.988 - - - 0.999 - - 0.989 - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
3. znf296 ENSDARG00000077897 658 1.986 - - - - - - 0.994 - 0.992 zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
4. fastk ENSDARG00000077075 1619 1.976 - - - - - - 0.988 - 0.988 Fas-activated serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-680]
5. fkbp8 ENSDARG00000001734 1709 1.973 - - - - - - 0.989 - 0.984 FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
6. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.936 - - - 0.996 - - 0.940 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
7. pdcd4a ENSDARG00000021702 7293 1.906 - - - 0.988 - - - - 0.918 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
8. usp4 ENSDARG00000014770 1684 1.881 - - - 0.999 - - - 0.882 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
9. acad11 ENSDARG00000045411 350 1.867 - 0.872 - - - - 0.995 - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
10. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.858 - 0.863 - - - - - - 0.995 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
11. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.851 - 0.864 - - - - - - 0.987 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
12. ripk1l ENSDARG00000006677 593 1.85 - 0.857 - - - - 0.993 - - receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
13. ncoa6 ENSDARG00000071272 759 1.843 - - - - - - 0.996 0.847 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
14. eppk1 ENSDARG00000096359 4315 1.836 - 0.839 - 0.997 - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
15. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 1.834 - 0.840 - - - - 0.994 - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
16. trappc3 ENSDARG00000045364 1021 1.82 - - - - - - 0.995 0.825 - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
17. timm10 ENSDARG00000069116 4459 1.799 - - - - - - - 0.877 0.922 translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
18. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.789 - 0.834 - - - - - - 0.955 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
19. med14 ENSDARG00000009953 1383 1.786 - - - - - - 0.997 0.789 - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
20. NBR1 NBR1 752 1.781 - 0.787 - - - - 0.994 - -
21. rpa1 ENSDARG00000003938 4403 1.778 - - - - - - 0.825 - 0.953 replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
22. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 1.774 - 0.791 - - - - - - 0.983 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
23. zgc:171775 ENSDARG00000058381, ENSDARG00000114470 5760 1.771 - 0.860 - - - - - - 0.911 zgc:171775 [Source:ZFIN;Acc:ZDB-GENE-030131-4309]
24. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 1.769 - 0.774 - - - - 0.995 - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
25. cstf3 ENSDARG00000018904 6111 1.759 - - - 0.792 - - 0.967 - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
26. acot11a ENSDARG00000058229 531 1.756 - - - - - 0.761 0.995 - - acyl-CoA thioesterase 11a [Source:ZFIN;Acc:ZDB-GENE-050522-538]
27. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.753 - - - - - - 0.957 - 0.796 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
28. pex16 ENSDARG00000058202 486 1.752 - 0.888 - - - - - 0.864 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
29. cyt1 ENSDARG00000092947 1717 1.742 - - - - - - - 0.764 0.978 type I cytokeratin, enveloping layer [Source:ZFIN;Acc:ZDB-GENE-991008-6]
30. si:ch73-110p20.1 5932 1.741 - - - 0.993 - - - - 0.748 si:ch73-110p20.1
31. eif4ebp3l ENSDARG00000041607 5257 1.739 - - - - - - 0.793 - 0.946 eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
32. mri1 ENSDARG00000075754 2567 1.729 - 0.773 - - - - - - 0.956 methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
33. ppib ENSDARG00000092798 21969 1.728 - - - 0.831 - - 0.897 - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
34. ipmkb ENSDARG00000029291 625 1.718 - 0.723 - - - - 0.995 - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
35. CWC15 ENSDARG00000013382 8969 1.715 - 0.756 - - - - 0.959 - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
36. GRB10 GRB10 1496 1.711 - - - - - - 0.982 0.729 -
37. LRP10 ENSDARG00000054539 1895 1.711 - 0.720 - - - - 0.991 - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
38. ino80c ENSDARG00000055719 1512 1.71 - - - - - 0.715 0.995 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
39. tfdp1b ENSDARG00000016304 3071 1.71 0.725 - - - - - - - 0.985 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
40. sh3bgrl3 ENSDARG00000098075 3071 1.708 - 0.727 - - - - 0.981 - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
41. atf6 ENSDARG00000012656 3873 1.705 - - - - - 0.721 - - 0.984 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
42. ppp2r2d ENSDARG00000102009 5710 1.702 - - - - - 0.778 - - 0.924 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
43. rassf1 ENSDARG00000004840 1248 1.702 - - - - - - 0.992 0.710 - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
44. gbgt1l4 ENSDARG00000068503 1009 1.697 - 0.709 - - - - - - 0.988 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-031204-4]
45. lmo2 ENSDARG00000095019 1098 1.691 - - - - - - - 0.700 0.991 LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
46. gapdhs ENSDARG00000039914 8760 1.691 - - - - - - 0.964 - 0.727 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
47. nrp2b ENSDARG00000038446 783 1.683 - 0.822 - - - - - 0.861 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
48. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.681 - - - - - - 0.951 - 0.730 structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
49. sap30l ENSDARG00000030213 5795 1.658 - 0.854 - - - - - 0.804 - sap30-like [Source:ZFIN;Acc:ZDB-GENE-030131-5287]
50. rab35 rab35 1287 1.656 - 0.929 - - - - - 0.727 -
51. C22H6orf89 C22H6orf89 1076 1.654 - - - - - - 0.837 0.817 -
52. prpf8 ENSDARG00000026180 7026 1.653 - - - - - - 0.910 - 0.743 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
53. chst12a ENSDARG00000028786 598 1.652 0.791 - - - - - - 0.861 - carbohydrate (chondroitin 4) sulfotransferase 12a [Source:ZFIN;Acc:ZDB-GENE-081022-13]
54. mfsd5 ENSDARG00000015997 570 1.65 0.756 0.894 - - - - - - - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
55. ATP5J 343 1.635 - 0.812 - - - - - 0.823 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
56. ENSDARG00000086641 ENSDARG00000086641 1819 1.635 - 0.765 - - - - 0.870 - -
57. bola1 ENSDARG00000039915 658 1.633 - 0.835 - - - - - 0.798 - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
58. myh14 ENSDARG00000073732 502 1.629 0.761 0.868 - - - - - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
59. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 1.626 0.775 0.851 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
60. ck2a2a ck2a2a 1695 1.623 - 0.866 - - - - - 0.757 -
61. dad1 ENSDARG00000102105 14788 1.618 - 0.713 - - - - - - 0.905 defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
62. prmt1 ENSDARG00000010246 11311 1.616 - - - 0.889 - - - - 0.727 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
63. ddx39b ENSDARG00000036069 1151 1.607 - 0.733 - - - - - 0.874 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:ZFIN;Acc:ZDB-GENE-040426-1259]
64. lysmd1 ENSDARG00000054789 277 1.597 0.769 - - - - - - 0.828 - LysM, putative peptidoglycan-binding, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1094]
65. HYKK HYKK 261 1.576 0.717 - - - - - - 0.859 -
66. adh8b ENSDARG00000024278, ENSDARG00000116820 8008 1.57 - 0.849 - - - - 0.721 - - alcohol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-030529-2]
67. fbxo42 ENSDARG00000087545 262 1.568 - 0.860 - - - 0.708 - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
68. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.565 - - - 0.836 - - - - 0.729 ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
69. col16a1 ENSDARG00000009194 5600 1.562 - - - - - - 0.725 - 0.837 collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
70. tnk1 ENSDARG00000069433 639 1.552 0.719 - - - - 0.833 - - - tyrosine kinase, non-receptor, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7427]
71. acat1 ENSDARG00000045888 1488 1.545 - 0.834 - - - - - 0.711 - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
72. tcf25 ENSDARG00000040861 1506 1.535 - 0.700 - - - - 0.835 - - transcription factor 25 (basic helix-loop-helix) [Source:ZFIN;Acc:ZDB-GENE-040905-2]
73. ripply1 ENSDARG00000054103 367 1.519 0.800 - - - - 0.719 - - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
74. pnpla2 ENSDARG00000089390 129 1.518 0.716 0.802 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
75. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 1.514 - 0.793 - - - 0.721 - - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
76. camk2g1 ENSDARG00000071395 10456 1.514 - - - - - - 0.766 - 0.748 calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 1 [Source:ZFIN;Acc:ZDB-GENE-050913-146]
77. rnf44 ENSDARG00000068582 1612 1.507 - - - - - 0.735 - 0.772 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
78. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.506 - 0.749 - - - - - 0.757 - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
79. fkbp14 ENSDARG00000040695 7725 1.501 - - - - - - 0.744 - 0.757 FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
80. kansl1a ENSDARG00000090895 2593 1.485 - 0.702 - - - 0.783 - - - KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
81. ppp2r5a ENSDARG00000027017 2397 1 - - - 1.000 - - - - - protein phosphatase 2, regulatory subunit B', alpha isoform [Source:ZFIN;Acc:ZDB-GENE-040724-174]
82. atat1 ENSDARG00000004472 700 1 - - - 1.000 - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
83. cpt2 ENSDARG00000038618, ENSDARG00000112216 1040 1 - - - 1.000 - - - - - carnitine palmitoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6719]
84. abcc2 ENSDARG00000014031, ENSDARG00000116140 1158 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1523]
85. exosc8 ENSDARG00000068755 951 1 - - - 1.000 - - - - - exosome component 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1736]
86. cbx3b ENSDARG00000092158 1976 0.999 - - - 0.999 - - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
87. mbtps2 ENSDARG00000057577 1285 0.999 - - - 0.999 - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
88. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.999 - - - 0.999 - - - - - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
89. ZNF628 1104 0.999 - - - 0.999 - - - - - zinc finger protein 628, transcript variant X3
90. C13H9orf72 C13H9orf72 2310 0.999 - - - 0.999 - - - - -
91. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 0.999 - - - 0.999 - - - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
92. wu:fj13e08 1223 0.999 - - - 0.999 - - - - - wu:fj13e08
93. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.998 - - - 0.998 - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
94. greb1 ENSDARG00000070794 1741 0.998 - - - 0.998 - - - - - growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]
95. ip6k2 ip6k2 3926 0.998 - - - 0.998 - - - - -
96. RAB38 122 0.998 - - - - - - 0.998 - - RAB38, member RAS oncogene family
97. nin ENSDARG00000060298 1558 0.998 - - - 0.998 - - - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
98. kdsr ENSDARG00000012021 1560 0.998 - - - 0.998 - - - - - 3-ketodihydrosphingosine reductase [Source:ZFIN;Acc:ZDB-GENE-040426-853]
99. rcc1 ENSDARG00000037158 1165 0.998 - - - 0.998 - - - - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
100. syf2 ENSDARG00000004706 2463 0.998 - - - 0.998 - - - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]

There are 1631 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA