Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc153

Gene Name Gene ID Reads Annotation
ccdc153 ENSDARG00000077161 93 coiled-coil domain containing 153 [Source:ZFIN;Acc:ZDB-GENE-080204-16]










Genes with expression patterns similar to ccdc153

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc153 ENSDARG00000077161 93 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 153 [Source:ZFIN;Acc:ZDB-GENE-080204-16]
2. trim3a ENSDARG00000063711 44 2.256 0.737 - - 0.801 - 0.718 - - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
3. chrm2a ENSDARG00000098612 5 1.758 0.780 - - - - 0.978 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
4. ncanb ENSDARG00000005783 22 1.758 0.780 - - - - 0.978 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
5. crygm2d14 ENSDARG00000087301 66 1.729 - - - 0.751 - 0.978 - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
6. zgc:92249 14 1.707 - - - - - 0.978 - - 0.729 zgc:92249
7. JAKMIP1 ENSDARG00000076090 55 1.689 0.711 - - - - 0.978 - - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
8. im:7140055 ENSDARG00000092181 450 1.658 - - - - - 0.800 0.858 - - im:7140055 [Source:ZFIN;Acc:ZDB-GENE-041111-101]
9. WNK2 ENSDARG00000104989 429 1.643 0.748 - - - - 0.895 - - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
10. GALNT9 ENSDARG00000006832 120 1.628 0.780 - - - - 0.848 - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
11. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 1.619 0.833 - - - - 0.786 - - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
12. evx2 ENSDARG00000059255 317 1.592 - - - 0.765 - 0.827 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
13. KCTD5 KCTD5 109 1.581 - - - - - 0.785 0.796 - -
14. CT025910.1 CT025910.1 143 1.572 0.850 - - - - - 0.722 - -
15. rab11bb ENSDARG00000090086 43 1.562 0.777 - - - - 0.785 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
16. slc12a5b ENSDARG00000078187 329 1.556 0.761 - - - - 0.795 - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
17. AL929239.1 AL929239.1 54 1.545 - - - - - 0.723 0.822 - -
18. porcnl_1 ENSDARG00000052455 683 1.527 0.774 - - - - - 0.753 - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
19. CABZ01028287.1 CABZ01028287.1 626 1.525 0.764 - - 0.761 - - - - -
20. nhlh2 ENSDARG00000025495 1860 1.514 0.802 - - - - 0.712 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
21. BSN_1 BSN_1 21 1.504 0.780 - - - - 0.724 - - -
22. PRKAR2B ENSDARG00000036446 812 1.484 0.751 - - - - 0.733 - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
23. myf5 ENSDARG00000007277 1051 1.468 - - 0.750 - - - 0.718 - - myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]
24. Sep-03 Sep-03 1124 1.456 0.703 - - - - 0.753 - - -
25. her4.1 ENSDARG00000056732 1264 1.431 0.708 - - - - 0.723 - - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
26. tbx6 ENSDARG00000011785 132 1.418 - - 0.716 - - 0.702 - - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
27. MTMR11 ENSDARG00000069755 917 1.405 0.702 - - - - - 0.703 - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
28. cspg5b ENSDARG00000099793 67 0.999 - - - - - 0.999 - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
29. galnt13 ENSDARG00000099227 1059 0.999 - - - - - 0.999 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
30. ankk1 ENSDARG00000056921 119 0.999 - - - - - 0.999 - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
31. snx8b ENSDARG00000078057 15 0.999 - - - - - 0.999 - - - sorting nexin 8b [Source:ZFIN;Acc:ZDB-GENE-090313-317]
32. sez6l ENSDARG00000100594 35 0.994 - - - - - 0.994 - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
33. nsmfa ENSDARG00000060025 70 0.991 - - - - - 0.991 - - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
34. prepl ENSDARG00000017853, ENSDARG00000114415 4 0.978 - - - - - 0.978 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
35. skor1a ENSDARG00000069030 19 0.978 - - - - - 0.978 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
36. trim9 ENSDARG00000039123 53 0.978 - - - - - 0.978 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
37. ACSL6 12 0.978 - - - - - 0.978 - - - acyl-CoA synthetase long-chain family member 6
38. barhl1b ENSDARG00000019013, ENSDARG00000113145 101 0.978 - - - - - 0.978 - - - BarH-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-060118-2]
39. BX005294.2 ENSDARG00000109361 3 0.978 - - - - - 0.978 - - -
40. nmu ENSDARG00000043299 67 0.978 - - - - - 0.978 - - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
41. mapk9 ENSDARG00000077364 38 0.978 - - - - - 0.978 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
42. si:dkey-4c15.6 si:dkey-4c15.6 6 0.978 - - - - - 0.978 - - -
43. pygo1 ENSDARG00000098687 4 0.978 - - - - - 0.978 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
44. FAM177A1 ENSDARG00000079636 19 0.978 - - - - - 0.978 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
45. TDRD6 ENSDARG00000070052 1 0.978 - - - - - 0.978 - - - tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
46. BX248324.1 ENSDARG00000096489 3 0.978 - - - - - 0.978 - - -
47. ZNF337_16 ZNF337_16 22 0.978 - - - - - 0.978 - - -
48. BX323448.1 ENSDARG00000116236 10 0.978 - - - - - 0.978 - - -
49. zgc:77112 ENSDARG00000015657 24 0.978 - - - - - 0.978 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
50. GPR114 GPR114 1 0.978 - - - - - 0.978 - - -
51. RIC3_1 ENSDARG00000105549 2 0.978 - - - - - 0.978 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
52. zgc:165582 ENSDARG00000074362 198 0.978 - - - - - 0.978 - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
53. si:dkeyp-33c10.5 11 0.978 - - - - - 0.978 - - - si:dkeyp-33c10.5, transcript variant X2
54. npy4r ENSDARG00000043341, ENSDARG00000113787 1 0.978 - - - - - 0.978 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
55. nr1d4a ENSDARG00000031161 24 0.978 - - - - - 0.978 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
56. si:ch211-207c7.6 si:ch211-207c7.6 23 0.978 - - - - - 0.978 - - -
57. FAM120B ENSDARG00000030804 1 0.978 - - - - - 0.978 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
58. OSBPL1A ENSDARG00000105147 16 0.978 - - - - - 0.978 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
59. PLCB1 2 0.978 - - - - - 0.978 - - - phospholipase C beta 1
60. CR678040.1 CR678040.1 117 0.978 - - - - - 0.978 - - -
61. GAS2 18 0.978 - - - - - 0.978 - - - growth arrest specific 2, transcript variant X1
62. CABZ01063402.1 CABZ01063402.1 64 0.978 - - - - - 0.978 - - -
63. syt9b ENSDARG00000029239 31 0.978 - - - - - 0.978 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
64. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 0.978 - - - - - 0.978 - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
65. si:ch211-274p24.3 si:ch211-274p24.3 72 0.978 - - - - - 0.978 - - -
66. si:ch211-195i24.1 si:ch211-195i24.1 10 0.978 - - - - - 0.978 - - -
67. si:dkey-284p5.3 ENSDARG00000095638 4 0.978 - - - - - 0.978 - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
68. psmb11 psmb11 5 0.978 - - - - - 0.978 - - -
69. si:ch211-208f21.4 si:ch211-208f21.4 4 0.978 - - - - - 0.978 - - -
70. grin2ca ENSDARG00000078149 13 0.978 - - - - - 0.978 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
71. trpa1b ENSDARG00000031875 39 0.978 - - - - - 0.978 - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
72. purg ENSDARG00000099187, ENSDARG00000114450 33 0.978 - - - - - 0.978 - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
73. si:ch211-59g22.2 si:ch211-59g22.2 7 0.978 - - - - - 0.978 - - -
74. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 0.978 - - - - - 0.978 - - -
75. fgf11b ENSDARG00000043907 16 0.978 - - - - - 0.978 - - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
76. zgc:113263 ENSDARG00000045842 51 0.978 - - - - - 0.978 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
77. SYT17 ENSDARG00000060741 1 0.978 - - - - - 0.978 - - - synaptotagmin XVII [Source:ZFIN;Acc:ZDB-GENE-090527-1]
78. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 0.978 - - - - - 0.978 - - - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
79. FBLN7 ENSDARG00000089519 4 0.978 - - - - - 0.978 - - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
80. si:dkey-11e23.3 si:dkey-11e23.3 3 0.978 - - - - - 0.978 - - -
81. HIST1H4J HIST1H4J 31 0.978 - - - - - 0.978 - - -
82. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 0.978 - - - - - 0.978 - - - leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
83. tnk2b ENSDARG00000104409 1 0.978 - - - - - 0.978 - - - tyrosine kinase, non-receptor, 2b [Source:ZFIN;Acc:ZDB-GENE-110411-165]
84. zgc:165453 ENSDARG00000078183 3 0.978 - - - - - 0.978 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
85. ARHGEF10L ARHGEF10L 18 0.978 - - - - - 0.978 - - -
86. si:dkey-122c11.4 si:dkey-122c11.4 13 0.978 - - - - - 0.978 - - -
87. cecr1b 2 0.978 - - - - - 0.978 - - - cat eye syndrome chromosome region, candidate 1b
88. CABZ01009626.1 CABZ01009626.1 2 0.978 - - - - - 0.978 - - -
89. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 0.978 - - - - - 0.978 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
90. ccr7 ENSDARG00000044561 2 0.978 - - - - - 0.978 - - - chemokine (C-C motif) receptor 7 [Source:ZFIN;Acc:ZDB-GENE-060522-2]
91. 5S_rRNA_15 5S_rRNA_15 9 0.978 - - - - - 0.978 - - -
92. wu:fe11b02_1 wu:fe11b02_1 7 0.978 - - - - - 0.978 - - -
93. si:dkey-272j9.2 si:dkey-272j9.2 91 0.978 - - - - - 0.978 - - -
94. si:ch211-168h21.3 10 0.978 - - - - - 0.978 - - - si:ch211-168h21.3
95. nsfa ENSDARG00000007654 16 0.978 - - - - - 0.978 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
96. wnt10b ENSDARG00000040925 162 0.978 - - - - - 0.978 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
97. shank3a ENSDARG00000063332 5 0.978 - - - - - 0.978 - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
98. wfs1b ENSDARG00000074617 69 0.978 - - - - - 0.978 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
99. PRKCA_1 ENSDARG00000099841 12 0.978 - - - - - 0.978 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
100. si:ch211-214c7.4 ENSDARG00000069595 56 0.978 - - - - - 0.978 - - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]

There are 919 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA