Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc127b

Gene Name Gene ID Reads Annotation
ccdc127b ENSDARG00000008946 141 coiled-coil domain containing 127b [Source:ZFIN;Acc:ZDB-GENE-060503-656]










Genes with expression patterns similar to ccdc127b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc127b ENSDARG00000008946 141 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 127b [Source:ZFIN;Acc:ZDB-GENE-060503-656]
2. ttr ENSDARG00000037191 11 1.608 0.767 - - - - - 0.841 - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
3. si:ch211-130m23.2 ENSDARG00000095136 121 1.601 - 0.759 - - - - 0.842 - - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
4. zgc:110434_1 30 1.592 - 0.764 - - - - 0.828 - - zgc:110434
5. tada2b ENSDARG00000003769 507 1.586 - - - - - 0.769 0.817 - - transcriptional adaptor 2B [Source:ZFIN;Acc:ZDB-GENE-050522-557]
6. med29 ENSDARG00000026448, ENSDARG00000109733 972 1.582 - 0.704 - - - - 0.878 - - mediator complex subunit 29 [Source:ZFIN;Acc:ZDB-GENE-021217-1]
7. zgc:158852 ENSDARG00000102076 65 1.543 0.738 - - - - - 0.805 - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
8. dars2 ENSDARG00000060861 137 1.542 0.788 - - - - - 0.754 - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
9. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.54 0.767 - - - - - 0.773 - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
10. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 1.505 0.756 - - - - - 0.749 - - laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
11. snrpb2 ENSDARG00000039424 1597 1.476 - 0.765 - - - - 0.711 - - small nuclear ribonucleoprotein polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-060616-2]
12. gstm3 gstm3 1164 1.473 - 0.705 - - - - 0.768 - -
13. chl1a ENSDARG00000077881 1488 1.472 - 0.710 - - - - 0.762 - - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
14. tctex1d1 ENSDARG00000103545 409 1.456 - 0.702 - - - - 0.754 - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
15. ramp2 ENSDARG00000037895 633 1.451 - 0.744 - - - - 0.707 - - receptor (G protein-coupled) activity modifying protein 2 [Source:ZFIN;Acc:ZDB-GENE-080204-79]
16. efcab1 ENSDARG00000061377 234 1.427 0.713 - - - - 0.714 - - - EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-040914-40]
17. gadd45aa ENSDARG00000043581 114 0.97 - - - - - - 0.970 - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
18. abcb10 ENSDARG00000061591 253 0.959 - - - - - - 0.959 - - ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Source:ZFIN;Acc:ZDB-GENE-040525-2]
19. nudt1 ENSDARG00000030573 268 0.94 - - - - - - 0.940 - - nudix (nucleoside diphosphate linked moiety X)-type motif 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2757]
20. dnajc3 dnajc3 802 0.937 - - - - - - 0.937 - -
21. slc6a4a ENSDARG00000061165 206 0.934 - - - - - - 0.934 - - solute carrier family 6 (neurotransmitter transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060314-1]
22. trim25l ENSDARG00000020863 292 0.925 - - - - - - 0.925 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
23. SIPA1L3 ENSDARG00000061699 268 0.92 - - - - - - 0.920 - - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
24. ikbkb ENSDARG00000079123 498 0.916 - - - - - - 0.916 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
25. si:ch211-250c4.3 si:ch211-250c4.3 677 0.916 - - - - - - 0.916 - -
26. pdxkb ENSDARG00000036546 721 0.915 - - - - - - 0.915 - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
27. pomgnt1 ENSDARG00000052025, ENSDARG00000111516 983 0.912 - - - - - - 0.912 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:ZFIN;Acc:ZDB-GENE-070112-991]
28. nsmaf ENSDARG00000051920 474 0.912 - - - - - - 0.912 - - neutral sphingomyelinase (N-SMase) activation associated factor [Source:ZFIN;Acc:ZDB-GENE-050417-342]
29. nck1b ENSDARG00000075369 1596 0.911 - - - - - - 0.911 - - NCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
30. zgc:77486 ENSDARG00000013711, ENSDARG00000093978, ENSDARG00000111468, ENSDARG00000116962 139 0.908 - - - - - - 0.908 - - zgc:77486 [Source:ZFIN;Acc:ZDB-GENE-040426-2056]
31. tfcp2 ENSDARG00000060306 1024 0.908 - - - - - - 0.908 - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
32. prom2 ENSDARG00000039406 278 0.906 - - - - - - 0.906 - - prominin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-16]
33. arhgef25b ENSDARG00000014465 669 0.906 - - - - - - 0.906 - - Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
34. nox1 ENSDARG00000087574 60 0.906 - - - - - - 0.906 - - NADPH oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-070404-1]
35. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 0.904 - - - - - - 0.904 - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
36. phip ENSDARG00000015970 1080 0.902 - - - - - - 0.902 - - pleckstrin homology domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-261]
37. si:dkey-17e16.17 615 0.902 - - - - - - 0.902 - - si:dkey-17e16.17
38. defbl1 ENSDARG00000075161 211 0.9 - - - - - - 0.900 - - defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
39. chmp3 ENSDARG00000038064 577 0.894 - - - - - - 0.894 - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
40. prmt10 prmt10 312 0.894 - - - - - - 0.894 - -
41. zbtb21 ENSDARG00000043285 380 0.893 - 0.893 - - - - - - - zinc finger and BTB domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-050411-7]
42. tom1 ENSDARG00000104581 1457 0.891 - - - - - - 0.891 - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
43. sema6dl ENSDARG00000011533 319 0.887 - - - - - 0.887 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like [Source:ZFIN;Acc:ZDB-GENE-050417-171]
44. vcana ENSDARG00000103515 611 0.887 - - - - - - 0.887 - - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
45. fam83b ENSDARG00000078309 318 0.886 - - - - - - 0.886 - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
46. fam134c fam134c 1550 0.884 - - - - - - 0.884 - -
47. twist3 ENSDARG00000019646 1221 0.882 - 0.882 - - - - - - - twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
48. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 0.882 - - - - - - 0.882 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
49. cx44.2 ENSDARG00000034207, ENSDARG00000113651 431 0.881 - - - - - - 0.881 - - connexin 44.2 [Source:ZFIN;Acc:ZDB-GENE-010619-1]
50. bcap29 ENSDARG00000016231 299 0.879 - - - - - - 0.879 - - B cell receptor associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-050522-468]
51. dre-mir-26a-2 ENSDARG00000086601 1267 0.878 - 0.878 - - - - - - - dre-mir-26a-2 [Source:miRBase;Acc:MI0001925]
52. stk16 ENSDARG00000037777 255 0.878 - - - - - - 0.878 - - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
53. bag1 ENSDARG00000020895 1660 0.878 - - - - - - 0.878 - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
54. C3 C3 46 0.876 - 0.876 - - - - - - -
55. wu:fb63a08 38 0.875 - 0.875 - - - - - - - wu:fb63a08
56. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 0.874 - - - - - - 0.874 - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
57. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 0.874 - 0.874 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
58. zgc:174651 zgc:174651 90 0.873 - - - - - - 0.873 - -
59. gpd1c ENSDARG00000036942 869 0.872 - - - - - - 0.872 - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
60. MIER3_1 MIER3_1 756 0.87 - - - - - - 0.870 - -
61. gclm ENSDARG00000018953 1712 0.869 - 0.869 - - - - - - - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
62. wash wash 172 0.869 - 0.869 - - - - - - -
63. AIM1L AIM1L 899 0.869 - - - - - - 0.869 - -
64. CU655970.1 CU655970.1 2123 0.869 - - - - - - 0.869 - -
65. si:ch211-87m7.2 ENSDARG00000030129 223 0.868 - - - - - - 0.868 - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
66. GANAB_2 GANAB_2 3210 0.866 - - - - - - 0.866 - -
67. BX296557.2 BX296557.2 1083 0.866 - - - - - - 0.866 - -
68. IFI30 ENSDARG00000056378, ENSDARG00000112359 73 0.865 - - - - - - 0.865 - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
69. lpar6b ENSDARG00000069441 65 0.864 - - - - - - 0.864 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
70. CU928070.1 CU928070.1 1152 0.863 - - - - - - 0.863 - -
71. tbc1d19 ENSDARG00000013842 253 0.862 - 0.862 - - - - - - - TBC1 domain family, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1265]
72. ZBTB11 ENSDARG00000017886 817 0.862 - - - - - - 0.862 - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
73. zgc:113452 ENSDARG00000074146 759 0.862 - - - - - - 0.862 - - zgc:113452 [Source:ZFIN;Acc:ZDB-GENE-050913-16]
74. slc38a6 ENSDARG00000054312 112 0.861 - - - - - - 0.861 - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
75. dhrs13l1 ENSDARG00000098746 102 0.86 - - - - - - 0.860 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
76. popdc3 ENSDARG00000058551 538 0.86 - - - - - - 0.860 - - popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]
77. lace1b lace1b 126 0.86 0.860 - - - - - - - -
78. si:ch211-259i2.2 si:ch211-259i2.2 45 0.86 - - - - - - 0.860 - -
79. si:ch211-219f7.3 si:ch211-219f7.3 48 0.859 - - - - - - 0.859 - -
80. srpx2 ENSDARG00000034559 452 0.859 - - - - - - 0.859 - - sushi-repeat containing protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-110411-231]
81. atg4c ENSDARG00000044373 979 0.857 - 0.857 - - - - - - - autophagy related 4C, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040625-84]
82. ttc39c ENSDARG00000102308, ENSDARG00000115554 748 0.856 - 0.856 - - - - - - - tetratricopeptide repeat domain 39C [Source:ZFIN;Acc:ZDB-GENE-050522-194]
83. cmah ENSDARG00000057714 852 0.855 - 0.855 - - - - - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
84. U3 U3 287 0.855 - - - - - - 0.855 - -
85. mettl14 ENSDARG00000070278, ENSDARG00000112383 278 0.853 - 0.853 - - - - - - - methyltransferase like 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2328]
86. CU570791.5 CU570791.5 872 0.851 - - - - - - 0.851 - -
87. tmem168a ENSDARG00000068705 498 0.851 - - - - - - 0.851 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
88. kif14 ENSDARG00000062187, ENSDARG00000112389 653 0.848 - 0.848 - - - - - - - kinesin family member 14 [Source:ZFIN;Acc:ZDB-GENE-030131-5759]
89. cyp26c1 ENSDARG00000056029 1426 0.848 - - - - - - 0.848 - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
90. tnfaip6 ENSDARG00000093440, ENSDARG00000111060 91 0.848 - - - - - - 0.848 - - tumor necrosis factor, alpha-induced protein 6 [Source:ZFIN;Acc:ZDB-GENE-060421-2654]
91. dennd2c ENSDARG00000073738 161 0.848 - - - - - - 0.848 - - DENN/MADD domain containing 2C [Source:ZFIN;Acc:ZDB-GENE-081105-71]
92. ajuba ENSDARG00000077842 1152 0.848 - - - - - - 0.848 - - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
93. DTX2 ENSDARG00000032933, ENSDARG00000109243 909 0.845 - - - - - - 0.845 - - deltex 2, E3 ubiquitin ligase [Source:ZFIN;Acc:ZDB-GENE-081022-150]
94. zgc:136439 ENSDARG00000009267 720 0.845 - - - - - - 0.845 - - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
95. BX470254.1_1 ENSDARG00000097402 50 0.845 - - - - - - 0.845 - -
96. fam184b ENSDARG00000055099 199 0.845 0.845 - - - - - - - - family with sequence similarity 184, member B [Source:ZFIN;Acc:ZDB-GENE-090313-380]
97. pnkd ENSDARG00000071032 447 0.845 - - - - - - 0.845 - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
98. fam5b fam5b 45 0.844 - - - - - - 0.844 - -
99. lpcat4 ENSDARG00000035028 167 0.844 - - - - - - 0.844 - - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
100. abrab ENSDARG00000033854 380 0.843 0.843 - - - - - - - - actin binding Rho activating protein b [Source:ZFIN;Acc:ZDB-GENE-040822-7]

There are 832 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA