Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc12

Gene Name Gene ID Reads Annotation
ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]










Genes with expression patterns similar to ccdc12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
2. ercc1 ENSDARG00000031680 900 2.343 - 0.817 - - - - 0.740 0.786 - excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
3. prp19 prp19 4804 2.307 - - - - - 0.713 0.883 0.711 -
4. vangl2 ENSDARG00000027397 2418 2.191 - - - - - 0.719 0.766 - 0.706 VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
5. sdhaf2 ENSDARG00000062971, ENSDARG00000114840 1320 1.679 - 0.775 - - - - 0.904 - - succinate dehydrogenase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7564]
6. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 1.647 - 0.827 - - - - 0.820 - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
7. ZNF70_2 ZNF70_2 1866 1.646 - - - - - - 0.842 0.804 -
8. phf17 phf17 790 1.646 - 0.716 - - - - 0.930 - -
9. rnmt ENSDARG00000070553 1743 1.645 - 0.903 - - - - 0.742 - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
10. CASKIN2_1 CASKIN2_1 2299 1.633 - 0.835 - - - - - 0.798 -
11. JHDM1D JHDM1D 2277 1.632 - - - - - - 0.711 0.921 -
12. zgc:112962 ENSDARG00000069102 431 1.624 - - - - - - 0.820 0.804 - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
13. asnsd1 830 1.622 - - - - - - 0.819 0.803 - asparagine synthetase domain containing 1, transcript variant X1
14. tmub1 ENSDARG00000038787 1012 1.621 - 0.702 - - - - 0.919 - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
15. pak2b ENSDARG00000018476 4331 1.618 - 0.785 - - - 0.833 - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
16. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.617 - - - - - 0.756 0.861 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
17. si:ch211-113p18.3 ENSDARG00000087835 377 1.613 - - - - - - 0.807 0.806 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
18. sarnp ENSDARG00000059357 4768 1.611 - - - - - 0.754 0.857 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
19. smcr8a ENSDARG00000052818 559 1.606 - - - - - - 0.804 0.802 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
20. ptges3b ENSDARG00000089626 5666 1.597 0.763 - - - - - 0.834 - - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
21. arhgap5 ENSDARG00000061294 2228 1.594 - 0.779 - - - - 0.815 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
22. prmt1 ENSDARG00000010246 11311 1.587 - 0.862 - - - 0.725 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
23. TIMM22 ENSDARG00000091413 957 1.582 - 0.772 - - - - 0.810 - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
24. NAT16 ENSDARG00000086222 4682 1.576 - - - - - 0.785 - 0.791 - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
25. trmt112 ENSDARG00000071878, ENSDARG00000109878 930 1.575 - 0.795 - - - - 0.780 - - tRNA methyltransferase 11-2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-30]
26. C21H5orf15 C21H5orf15 2318 1.575 - - - - - - 0.815 0.760 -
27. yaf2 ENSDARG00000015966 1905 1.574 - - - - - 0.740 0.834 - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
28. eya4 ENSDARG00000012397, ENSDARG00000117039 887 1.571 - 0.779 - - - - - 0.792 - EYA transcriptional coactivator and phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-050327-93]
29. lrrc8a lrrc8a 674 1.565 - 0.767 - - - - 0.798 - -
30. mybbp1a ENSDARG00000078214 2458 1.565 - 0.772 - - - - - 0.793 - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
31. atad5a ENSDARG00000070568 1840 1.561 - 0.753 - - - - 0.808 - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
32. gps1 ENSDARG00000040650 3893 1.561 - - - - - 0.774 0.787 - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
33. popdc3 ENSDARG00000058551 538 1.558 - 0.806 - - - - 0.752 - - popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]
34. glmna ENSDARG00000058267 597 1.557 - 0.774 - - - - 0.783 - - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
35. elavl1 11672 1.553 - - - - - 0.824 - 0.729 - ELAV like RNA binding protein 1, transcript variant X3
36. cadm1a ENSDARG00000031075 2484 1.553 - 0.721 - - - - - 0.832 - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
37. AMBRA1_1 AMBRA1_1 2179 1.553 - 0.724 - - - - 0.829 - -
38. aqp1a.1 ENSDARG00000023713 3237 1.553 - 0.778 - - - - - 0.775 - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
39. lig4 ENSDARG00000060620 369 1.55 - - - - - - 0.742 0.808 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
40. syne1b ENSDARG00000063068 786 1.548 - - - - - - 0.749 0.799 - spectrin repeat containing, nuclear envelope 1b [Source:ZFIN;Acc:ZDB-GENE-071218-4]
41. eif4ba ENSDARG00000017439, ENSDARG00000117080 1882 1.546 - - - - - - 0.761 0.785 - eukaryotic translation initiation factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-060629-1]
42. gemin2 ENSDARG00000015638 886 1.541 - 0.741 - - - - 0.800 - - gem (nuclear organelle) associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3756]
43. dnajc5ab ENSDARG00000004836 2923 1.541 - 0.719 - - - - 0.822 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
44. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.54 - 0.813 - - - - 0.727 - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
45. pl10 pl10 10795 1.54 - - - - - 0.839 0.701 - -
46. CABZ01043370.1 CABZ01043370.1 2013 1.54 - - - - - - 0.761 0.779 -
47. eif4h ENSDARG00000042252 6742 1.538 - 0.785 - - - - - 0.753 - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
48. ccar1 ENSDARG00000074759, ENSDARG00000114899 1329 1.536 - 0.805 - - - 0.731 - - - cell division cycle and apoptosis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-146]
49. FAM114A2 ENSDARG00000079508 1226 1.533 - - - - - - 0.742 0.791 - family with sequence similarity 114, member A2 [Source:ZFIN;Acc:ZDB-GENE-030131-6308]
50. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.529 - 0.700 - - - 0.829 - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
51. ZNF337_25 ZNF337_25 1713 1.529 - - - - - 0.773 0.756 - -
52. dennd5a ENSDARG00000017006 3426 1.523 - 0.817 - - - - 0.706 - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
53. arid1aa ENSDARG00000101710 3644 1.521 - - - 0.721 - 0.800 - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
54. ppig ENSDARG00000044431 3427 1.521 - - - - - - 0.774 0.747 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
55. rad21a ENSDARG00000006092 393 1.518 0.730 - - - - 0.788 - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
56. pmpca ENSDARG00000102607 1024 1.515 - 0.717 - - - - - 0.798 - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
57. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 1.514 - 0.706 - - - 0.808 - - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
58. kirrela 1170 1.511 - 0.760 - - - - 0.751 - - kin of IRRE like a, transcript variant X2
59. BX088524.2 ENSDARG00000103268 564 1.51 0.725 - - - - - 0.785 - -
60. ep300b ENSDARG00000061108 5173 1.509 - - - - - - 0.733 0.776 - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
61. gins1 ENSDARG00000007624 1421 1.506 - 0.732 - - - - 0.774 - - GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
62. phgdh ENSDARG00000001873 8325 1.506 - 0.779 - - - 0.727 - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
63. nras ENSDARG00000038225 450 1.504 - 0.705 - - - - 0.799 - - NRAS proto-oncogene, GTPase [Source:ZFIN;Acc:ZDB-GENE-990415-166]
64. prnprs3 ENSDARG00000003705 1854 1.504 0.705 - - - - 0.799 - - - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
65. gpx7 ENSDARG00000091511 3045 1.502 - 0.705 - - - - 0.797 - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
66. papola ENSDARG00000009585 9567 1.502 - 0.713 - - - - 0.789 - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
67. tbl3 ENSDARG00000052344 1530 1.501 - 0.700 - - - - - 0.801 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
68. klhl41a ENSDARG00000068888 1034 1.501 - 0.716 - - - - 0.785 - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
69. hipk2 ENSDARG00000042518, ENSDARG00000111166 3099 1.498 0.782 - - - - - 0.716 - - homeodomain interacting protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031125-4]
70. rdh14b ENSDARG00000002467 991 1.497 - 0.708 - - - - - 0.789 - retinol dehydrogenase 14b [Source:ZFIN;Acc:ZDB-GENE-030131-6605]
71. zfand6 ENSDARG00000098443 2507 1.497 0.706 - - - - - 0.791 - - zinc finger, AN1-type domain 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8405]
72. ptpn21 ENSDARG00000062248 2010 1.486 - 0.701 - - - - - 0.785 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
73. gpd1l ENSDARG00000040024 2182 1.485 - 0.715 - - - - - 0.770 - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
74. st13 ENSDARG00000021973 7787 1.484 - - - - - 0.713 0.771 - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
75. tmem127 ENSDARG00000030981 1389 1.478 - - - - - - 0.737 0.741 - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
76. psmc1a ENSDARG00000030537 2799 1.477 - 0.738 - - - - 0.739 - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
77. pcif1 ENSDARG00000099084 2851 1.477 - 0.721 - - - 0.756 - - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
78. kdm5c ENSDARG00000006124 4389 1.476 - 0.753 - - - 0.723 - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
79. fntb ENSDARG00000027916 736 1.476 - 0.706 - - - - 0.770 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
80. hmbsb ENSDARG00000055991 3037 1.475 - 0.706 - - - - - 0.769 - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
81. asap1a ENSDARG00000029463 1566 1.474 - 0.712 - - - - 0.762 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
82. CCDC134 CCDC134 477 1.473 - 0.752 - - - - 0.721 - -
83. BX085195.1 BX085195.1 995 1.469 0.707 0.762 - - - - - - -
84. mrps10 ENSDARG00000045913 1453 1.468 - 0.733 - - - - 0.735 - - mitochondrial ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040914-39]
85. mif ENSDARG00000071336 1328 1.467 - 0.758 - - - - 0.709 - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
86. ndufaf5 ENSDARG00000061629 421 1.467 - 0.755 - - - - 0.712 - - NADH:ubiquinone oxidoreductase complex assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-070410-110]
87. lphn3.1 lphn3.1 756 1.465 - 0.734 - - - 0.731 - - -
88. u2af1 ENSDARG00000015325 3217 1.465 - 0.758 - - - 0.707 - - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
89. nucks1a ENSDARG00000078473 28285 1.465 - 0.725 - - - 0.740 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
90. bcl7bb ENSDARG00000040396, ENSDARG00000116093 764 1.459 - 0.717 - - - 0.742 - - - BCL tumor suppressor 7Bb [Source:ZFIN;Acc:ZDB-GENE-010328-17]
91. vgll4b ENSDARG00000103730 5266 1.459 - - - - - - 0.705 0.754 - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
92. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.456 - 0.713 - - - - 0.743 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
93. azi2 ENSDARG00000102419 1380 1.454 - - - 0.709 - - 0.745 - - 5-azacytidine induced 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2097]
94. mcm5 ENSDARG00000019507 6407 1.452 - 0.713 - - - - - - 0.739 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
95. HYAL2 HYAL2 936 1.45 - 0.709 - - - - 0.741 - -
96. CU633849.1 CU633849.1 590 1.449 - - - - - 0.708 0.741 - -
97. polr2k ENSDARG00000075616 2047 1.448 - 0.734 - - - - 0.714 - - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
98. CU929408.1 CU929408.1 714 1.446 - 0.724 - - - - 0.722 - -
99. snrpe ENSDARG00000033175 7462 1.438 - 0.730 - - - - 0.708 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
100. si:dkey-238c7.16 ENSDARG00000069537, ENSDARG00000111432 5140 1.436 - 0.729 - - - - 0.707 - - si:dkey-238c7.16 [Source:ZFIN;Acc:ZDB-GENE-030131-4169]

There are 1804 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA