Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cbx3b

Gene Name Gene ID Reads Annotation
cbx3b ENSDARG00000092158 1976 chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]










Genes with expression patterns similar to cbx3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cbx3b ENSDARG00000092158 1976 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
2. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.964 0.980 - - 0.984 - - - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
3. hnrpdl 14288 1.868 0.907 - - 0.961 - - - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
4. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.854 0.985 - - - - - 0.869 - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
5. tctex1d1 ENSDARG00000103545 409 1.845 0.995 - - - - - - 0.850 - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
6. wdr3 ENSDARG00000011079 1403 1.775 0.992 - - - - - - 0.783 - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
7. ugp2b ENSDARG00000008200, ENSDARG00000110864 1516 1.765 0.986 - - - - - 0.779 - - UDP-glucose pyrophosphorylase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6352]
8. llgl2 ENSDARG00000023920 2617 1.756 - - - 0.997 - - 0.759 - - lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
9. piezo1 ENSDARG00000076870 4704 1.751 - - - 0.996 - - 0.755 - - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
10. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.748 0.910 - - 0.838 - - - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
11. RNF214 RNF214 816 1.746 0.994 - - - - - - 0.752 -
12. fam102bb ENSDARG00000002333 1483 1.743 - 0.858 - - - - - 0.885 - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
13. calr ENSDARG00000076290 13987 1.739 0.893 - - - - - - 0.846 - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
14. gabarapl2 ENSDARG00000027200 5120 1.735 0.962 - - - - - 0.773 - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
15. nucks1b ENSDARG00000012777 4468 1.735 - 0.743 - 0.992 - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
16. pdcd2 ENSDARG00000007892 223 1.733 - 0.832 - - - - - 0.901 - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
17. nt5c2b ENSDARG00000058231 3822 1.73 - - - 0.995 - - 0.735 - - 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
18. BX004880.1 BX004880.1 638 1.714 0.980 - - - - - - 0.734 -
19. rnf146 ENSDARG00000089981 715 1.713 0.974 - - - - - - 0.739 - ring finger protein 146 [Source:ZFIN;Acc:ZDB-GENE-030131-5997]
20. snap25b ENSDARG00000058117 469 1.71 - 0.846 - - - - - 0.864 - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
21. cers2b ENSDARG00000058992 5319 1.701 - - - 0.993 - - 0.708 - - ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]
22. ANKRD40 ENSDARG00000076490 748 1.696 - - - - - - 0.832 0.864 - ankyrin repeat domain 40 [Source:ZFIN;Acc:ZDB-GENE-120612-2]
23. FRRS1 FRRS1 80 1.692 - 0.824 - - - - - 0.868 -
24. MARK4 ENSDARG00000024966 3377 1.672 0.967 - - - - - 0.705 - - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
25. selt1a 9746 1.666 0.939 - - - - - 0.727 - - selenoprotein T, 1a
26. crfb8 crfb8 392 1.653 - 0.836 - - - - 0.817 - -
27. perp ENSDARG00000063572 6423 1.647 0.946 - - - - - 0.701 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
28. polh ENSDARG00000070231, ENSDARG00000111719 154 1.638 - 0.767 - - - - - 0.871 - polymerase (DNA directed), eta [Source:ZFIN;Acc:ZDB-GENE-060421-4949]
29. si:ch211-229b6.1 ENSDARG00000093422 151 1.605 - 0.740 - - - - - 0.865 - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
30. SERP1_1 ENSDARG00000076223 6668 1.59 0.875 - - - - - 0.715 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
31. ZDHHC20_1 ZDHHC20_1 440 1.577 - 0.707 - - - - - 0.870 -
32. si:ch211-264e16.1 ENSDARG00000068947 1358 1.576 - - - - - - 0.742 0.834 - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
33. pdrg1 ENSDARG00000045017 628 1.564 - 0.707 - - - - - 0.857 - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
34. si:ch211-10a23.2 ENSDARG00000060656 471 1.564 - 0.785 - - - - - 0.779 - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
35. KHDRBS3 ENSDARG00000101020 408 1.562 - 0.825 - - 0.737 - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
36. xdh ENSDARG00000055240 250 1.549 - 0.812 - - - - 0.737 - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
37. DTX3 DTX3 303 1.547 - - - - 0.716 - - 0.831 -
38. DAGLB ENSDARG00000089888 304 1.544 - - - - 0.751 - - 0.793 - diacylglycerol lipase, beta [Source:ZFIN;Acc:ZDB-GENE-070619-2]
39. CERS4 CERS4 319 1.542 - - - - - - 0.768 0.774 -
40. glb1l ENSDARG00000029955 736 1.516 - 0.704 - - - - - 0.812 - galactosidase, beta 1-like [Source:ZFIN;Acc:ZDB-GENE-050309-196]
41. terf1 ENSDARG00000058710 317 1.505 - 0.805 - - 0.700 - - - - telomeric repeat binding factor (NIMA-interacting) 1 [Source:ZFIN;Acc:ZDB-GENE-090612-2]
42. exosc1 ENSDARG00000059841 6895 1.505 - - - - - 0.764 0.741 - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
43. si:ch211-161h7.6 si:ch211-161h7.6 129 1.493 - 0.761 - - - - 0.732 - -
44. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 1.474 - - - - 0.732 - - 0.742 - plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
45. lrrfip1b ENSDARG00000095170 293 1.466 - 0.762 - - - - - 0.704 - leucine rich repeat (in FLII) interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-050208-324]
46. fstl1a ENSDARG00000015559 1687 1.464 - 0.741 - - - - 0.723 - - follistatin-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4148]
47. krt5 ENSDARG00000058371, ENSDARG00000112017 32812 1.444 - - - 0.730 0.714 - - - - keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
48. abcc2 ENSDARG00000014031, ENSDARG00000116140 1158 0.999 - - - 0.999 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1523]
49. cpt2 ENSDARG00000038618, ENSDARG00000112216 1040 0.999 - - - 0.999 - - - - - carnitine palmitoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6719]
50. exosc8 ENSDARG00000068755 951 0.999 - - - 0.999 - - - - - exosome component 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1736]
51. mbtps2 ENSDARG00000057577 1285 0.999 - - - 0.999 - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
52. greb1 ENSDARG00000070794 1741 0.999 - - - 0.999 - - - - - growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]
53. ccdc22 ENSDARG00000052379 2276 0.999 - - - 0.999 - - - - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
54. ZNF628 1104 0.999 - - - 0.999 - - - - - zinc finger protein 628, transcript variant X3
55. atat1 ENSDARG00000004472 700 0.999 - - - 0.999 - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
56. ppp2r5a ENSDARG00000027017 2397 0.999 - - - 0.999 - - - - - protein phosphatase 2, regulatory subunit B', alpha isoform [Source:ZFIN;Acc:ZDB-GENE-040724-174]
57. angptl4 ENSDARG00000035859 2701 0.998 - - - 0.998 - - - - - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
58. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 0.998 - - - 0.998 - - - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
59. creb1a ENSDARG00000053586 5068 0.998 - - - 0.998 - - - - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
60. eif4ba ENSDARG00000017439, ENSDARG00000117080 1882 0.998 - - - 0.998 - - - - - eukaryotic translation initiation factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-060629-1]
61. wu:fj13e08 1223 0.998 - - - 0.998 - - - - - wu:fj13e08
62. usp4 ENSDARG00000014770 1684 0.998 - - - 0.998 - - - - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
63. RAPGEF2 ENSDARG00000005482 2068 0.998 - - - 0.998 - - - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
64. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.998 - - - 0.998 - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
65. C13H9orf72 C13H9orf72 2310 0.998 - - - 0.998 - - - - -
66. rcc1 ENSDARG00000037158 1165 0.998 - - - 0.998 - - - - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
67. nin ENSDARG00000060298 1558 0.998 - - - 0.998 - - - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
68. rars ENSDARG00000054530 1495 0.997 - - - 0.997 - - - - - arginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9014]
69. syf2 ENSDARG00000004706 2463 0.997 - - - 0.997 - - - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
70. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 0.997 0.997 - - - - - - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
71. hexb ENSDARG00000034368 3505 0.997 - - - 0.997 - - - - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
72. ncoa4 ENSDARG00000021439 4581 0.997 - - - 0.997 - - - - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
73. ip6k2 ip6k2 3926 0.997 - - - 0.997 - - - - -
74. kdsr ENSDARG00000012021 1560 0.997 - - - 0.997 - - - - - 3-ketodihydrosphingosine reductase [Source:ZFIN;Acc:ZDB-GENE-040426-853]
75. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.997 - - - 0.997 - - - - - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
76. si:ch73-367f21.4 ENSDARG00000071097 862 0.996 0.996 - - - - - - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
77. elmod2 ENSDARG00000101669 3101 0.996 - - - 0.996 - - - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
78. thoc7 ENSDARG00000015394 3824 0.996 - - - 0.996 - - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
79. sema4e ENSDARG00000052997 607 0.996 0.996 - - - - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
80. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.996 0.996 - - - - - - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
81. zgc:77262 ENSDARG00000044545 5563 0.996 - - - 0.996 - - - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
82. eppk1 ENSDARG00000096359 4315 0.996 - - - 0.996 - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
83. hoxb7a ENSDARG00000056030 1212 0.996 0.996 - - - - - - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
84. ARFGAP1 ENSDARG00000101616 2952 0.996 - - - 0.996 - - - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
85. HDAC5 ENSDARG00000075139 1287 0.996 0.996 - - - - - - - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
86. cylda ENSDARG00000060058 768 0.996 0.996 - - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
87. lig3 ENSDARG00000052553 2665 0.996 - - - 0.996 - - - - - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
88. TMEM150A_2 TMEM150A_2 739 0.995 0.995 - - - - - - - -
89. cpped1 ENSDARG00000031968, ENSDARG00000112438 693 0.995 0.995 - - - - - - - - calcineurin-like phosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-118]
90. lsm14ab ENSDARG00000100553 3837 0.995 - - - 0.995 - - - - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
91. phf12a ENSDARG00000074303 1025 0.995 0.995 - - - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
92. atg4b ENSDARG00000052104 758 0.995 0.995 - - - - - - - - autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
93. napa napa 4444 0.995 - - - 0.995 - - - - -
94. slc22a2 ENSDARG00000030530 313 0.995 0.995 - - - - - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
95. daam2 ENSDARG00000028393 226 0.995 0.995 - - - - - - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
96. slc25a5 ENSDARG00000092553 626 0.995 0.995 - - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
97. myo6a ENSDARG00000044016 847 0.995 0.995 - - - - - - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
98. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 0.995 - - - 0.995 - - - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
99. atp1b3a ENSDARG00000015790 12310 0.995 - - - 0.995 - - - - - ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
100. meis3 ENSDARG00000002795 2509 0.995 - - - 0.995 - - - - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]

There are 1247 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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