Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cbx3a

Gene Name Gene ID Reads Annotation
cbx3a ENSDARG00000003860 4922 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]










Genes with expression patterns similar to cbx3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cbx3a ENSDARG00000003860 4922 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
2. arid2 ENSDARG00000007413 4413 2.602 - 0.815 0.917 - - - - 0.870 - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
3. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 2.454 - - 0.871 - 0.823 - 0.760 - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
4. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 2.429 - 0.712 - - - 0.988 - - 0.729 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
5. arhgap1 ENSDARG00000024324 6904 2.419 - - - - - - 0.769 0.907 0.743 Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
6. ldb1a ENSDARG00000010137 3035 2.414 - - 0.897 - - - 0.737 - 0.780 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
7. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.41 - - 0.800 - - 0.840 - - 0.770 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
8. cse1l ENSDARG00000006963 3261 2.408 - - - 0.700 - - 0.839 0.869 - CSE1 chromosome segregation 1-like (yeast) [Source:ZFIN;Acc:ZDB-GENE-990603-1]
9. wu:fc51f04 wu:fc51f04 7074 2.408 - - 0.702 - 0.868 - - - 0.838
10. marcksa ENSDARG00000004049 2518 2.387 - - - 0.742 0.848 - - - 0.797 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
11. tmpob ENSDARG00000022978 8121 2.386 - - - 0.744 - - - 0.794 0.848 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
12. srrm1 ENSDARG00000001244 4972 2.365 - 0.735 - - - - 0.810 0.820 - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
13. LPHN2 LPHN2 1971 2.354 - - 0.854 0.768 - - - - 0.732
14. eif4h ENSDARG00000042252 6742 2.346 - 0.726 - - - - - 0.899 0.721 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
15. supt6h ENSDARG00000006524 3221 2.335 - 0.721 - - 0.806 - - - 0.808 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
16. lfng ENSDARG00000037879 11783 2.303 - - 0.702 0.737 - - - - 0.864 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
17. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 2.296 - 0.752 - 0.808 - - - - 0.736 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
18. CREBZF ENSDARG00000089787 4261 2.29 0.704 - - - - - - 0.855 0.731 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
19. JHDM1D JHDM1D 2277 2.273 - 0.733 - - - - - 0.820 0.720
20. whsc1l1 8544 2.256 - - - 0.700 - - 0.711 - 0.845 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
21. ddx39ab ENSDARG00000015111 11619 2.246 - 0.740 - - - - - 0.798 0.708 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
22. smek1 ENSDARG00000042187 3509 2.241 - 0.791 - - - - 0.709 - 0.741 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
23. cnot3a ENSDARG00000007135 3084 2.188 - 0.716 0.747 - - - - - 0.725 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
24. mcm5 ENSDARG00000019507 6407 2.154 - 0.736 - - - - - 0.717 0.701 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
25. atad2b ENSDARG00000060537 3050 2.143 - 0.739 - 0.700 - - - - 0.704 ATPase family, AAA domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110411-210]
26. prc1a ENSDARG00000100918 1746 1.903 - - - - - 0.990 - 0.913 - protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
27. gspt1l ENSDARG00000098627 8381 1.872 - - 0.905 - - 0.967 - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
28. kdm1a ENSDARG00000060679 6152 1.865 - - - - 0.878 0.987 - - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
29. txnl4a ENSDARG00000036190 2048 1.827 - - - - - 0.994 - 0.833 - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
30. tmed7 ENSDARG00000046022 2435 1.823 - - - - - 0.994 - 0.829 - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
31. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.822 - - - - 0.829 0.993 - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
32. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.811 - - - - 0.841 0.970 - - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
33. axin2 ENSDARG00000100149 4223 1.809 - - - - 0.826 0.983 - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
34. brms1la ENSDARG00000006235 2011 1.803 - - - - 0.821 0.982 - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
35. Mar-07 Mar-07 2926 1.801 - 0.808 - - - 0.993 - - -
36. hoxb3a ENSDARG00000029263 5493 1.784 - - 0.865 - - 0.919 - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
37. tuba1c ENSDARG00000055216 8384 1.78 - - 0.912 - - - - - 0.868 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
38. onecutl ENSDARG00000040253 2143 1.778 - - 0.866 - - - - 0.912 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
39. insm1a ENSDARG00000091756 1838 1.776 - - - - - 0.989 - - 0.787 insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
40. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.771 - - - 0.778 - 0.993 - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
41. nova2 ENSDARG00000017673 7685 1.766 - - 0.876 - - - - - 0.890 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
42. zgc:77262 ENSDARG00000044545 5563 1.76 - - - - - 0.982 - 0.778 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
43. foxq1b ENSDARG00000055395 549 1.753 - - - - - 0.993 0.760 - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
44. cacybp ENSDARG00000014731 2650 1.749 - 0.757 - - - 0.992 - - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
45. maf1 ENSDARG00000013122 3365 1.747 - - - - - 0.986 0.761 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
46. xylt1 ENSDARG00000061248 2357 1.744 - - 0.865 - - - - 0.879 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
47. CABZ01072954.1 CABZ01072954.1 2330 1.737 - - 0.852 - - - - 0.885 -
48. pank1b ENSDARG00000010098 3202 1.734 - - 0.825 - - - - 0.909 - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
49. llgl1 ENSDARG00000009693 4205 1.734 - - - - - 0.970 - - 0.764 lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
50. si:ch211-51e12.7 ENSDARG00000045914 9598 1.728 - - 0.907 - 0.821 - - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
51. stk35l ENSDARG00000057497 3582 1.728 - - - - - - 0.831 0.897 - serine/threonine kinase 35, like [Source:ZFIN;Acc:ZDB-GENE-041212-52]
52. dnajc15 ENSDARG00000038309 1274 1.725 - - - - 0.749 0.976 - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
53. nrf1 ENSDARG00000000018 4683 1.719 - 0.734 - - - 0.985 - - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
54. psmb6 ENSDARG00000002240 8015 1.711 - - - - 0.784 - - 0.927 - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
55. atp6v1ab ENSDARG00000076318, ENSDARG00000112815 3858 1.711 - - 0.724 - - 0.987 - - - ATPase H+ transporting V1 subunit Ab [Source:ZFIN;Acc:ZDB-GENE-030131-9529]
56. nkd1 ENSDARG00000020053 4450 1.709 - 0.727 - - - 0.982 - - - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
57. eif2s3 ENSDARG00000008292 17051 1.708 - 0.805 - - - 0.903 - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
58. cbfa2t2 ENSDARG00000074337 4323 1.707 - - 0.871 - 0.836 - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
59. vrk1 ENSDARG00000018006 1759 1.706 - - 0.866 - - - - 0.840 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
60. fh ENSDARG00000075132 1340 1.702 - 0.716 - - - 0.986 - - - fumarate hydratase [Source:ZFIN;Acc:ZDB-GENE-010724-6]
61. ano10a ENSDARG00000057736 1306 1.699 - 0.709 - - - 0.990 - - - anoctamin 10a [Source:ZFIN;Acc:ZDB-GENE-050913-43]
62. znf292a ENSDARG00000016763 2253 1.694 - - 0.905 - - - - - 0.789 zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
63. cenpf ENSDARG00000055133 5267 1.693 - - 0.892 - 0.801 - - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
64. gpd1l ENSDARG00000040024 2182 1.692 - - - - - - 0.799 0.893 - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
65. tdg tdg 3269 1.69 - 0.833 0.857 - - - - - -
66. sulf2l sulf2l 4980 1.69 - - - - - 0.983 - - 0.707
67. palm3 ENSDARG00000071215 1776 1.686 - - - - 0.706 0.980 - - - paralemmin 3 [Source:ZFIN;Acc:ZDB-GENE-061215-74]
68. plp1a ENSDARG00000103732 3544 1.683 - - 0.853 - - - - - 0.830 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
69. ube2v1 ENSDARG00000041875 5739 1.679 - - 0.854 - 0.825 - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
70. prpf4bb ENSDARG00000040310 2260 1.674 - - - - - - - 0.905 0.769 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
71. srsf2a ENSDARG00000057484 25721 1.669 - - - - - 0.899 - - 0.770 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
72. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.667 - - 0.780 - - - - - 0.887 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
73. lbr ENSDARG00000014013 4835 1.667 - - 0.929 - - - - - 0.738 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
74. tox ENSDARG00000032317 9126 1.667 - - 0.921 - - - - - 0.746 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
75. vdac1 ENSDARG00000045132 8051 1.666 - - 0.877 - - - - - 0.789 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
76. MKI67 ENSDARG00000091150 11038 1.665 - - 0.800 - - - - - 0.865 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
77. rnf2 ENSDARG00000010381 3427 1.662 - - 0.871 - - - 0.791 - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
78. ctnnbip1 ENSDARG00000038954 2519 1.661 - - 0.854 - - - - - 0.807 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
79. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.659 - - - - 0.895 - - - 0.764 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
80. SCML2 ENSDARG00000012949 1310 1.652 - - - - - - - 0.883 0.769 Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
81. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.645 - - 0.890 - - - - - 0.755 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
82. slbp ENSDARG00000100558 3405 1.645 - - - - - - 0.832 - 0.813 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
83. wu:fb17g07 wu:fb17g07 10567 1.645 - - 0.870 - - - - - 0.775
84. paxip1 ENSDARG00000005606 1417 1.642 - - 0.875 - 0.767 - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
85. wu:fk48d07 wu:fk48d07 13245 1.639 - - - - - 0.882 - - 0.757
86. Sep-06 Sep-06 5465 1.638 - 0.834 - - - - 0.804 - -
87. setdb1a ENSDARG00000041243 1952 1.636 - - 0.858 - - - 0.778 - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
88. CASKIN2_1 CASKIN2_1 2299 1.635 - 0.727 - - - - - 0.908 -
89. hdgfrp2 7462 1.633 - 0.750 - - - - - - 0.883 hepatoma-derived growth factor-related protein 2, transcript variant X1
90. TMEM218 ENSDARG00000027129 716 1.632 - - - - - - 0.732 0.900 - transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
91. meis1 meis1 6937 1.631 - 0.738 - - - 0.893 - - -
92. lhx1a ENSDARG00000014018 958 1.63 - - - - - - - 0.918 0.712 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
93. rhogc ENSDARG00000028401 2671 1.629 - - 0.849 - 0.780 - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
94. mybbp1a ENSDARG00000078214 2458 1.629 - 0.708 - - - - - 0.921 - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
95. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 1.623 - - - - - - 0.711 0.912 - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
96. GUSB ENSDARG00000063126 2712 1.623 0.775 - 0.848 - - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
97. ptpn21 ENSDARG00000062248 2010 1.618 - 0.730 - - - - - 0.888 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
98. ddi2 ENSDARG00000006477 4190 1.618 - - - - 0.779 - - 0.839 - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
99. cd99l2 ENSDARG00000056722 5036 1.618 - - 0.830 - - - - - 0.788 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
100. PROSER1 ENSDARG00000086302 1935 1.616 - - - - - - - 0.854 0.762 proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]

There are 1721 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA