Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cbx1b

Gene Name Gene ID Reads Annotation
cbx1b ENSDARG00000054442 1206 chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]










Genes with expression patterns similar to cbx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cbx1b ENSDARG00000054442 1206 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
2. BX511121.1 ENSDARG00000029997 1774 2.647 0.890 - - - - - 0.799 - 0.958
3. atp6ap1a ENSDARG00000041417 898 2.394 0.703 - - 0.833 - - 0.858 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
4. unc119b ENSDARG00000044362 1528 2.37 0.731 - - 0.861 - - 0.778 - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
5. lamb2l ENSDARG00000033950 952 2.354 - 0.864 - - - 0.771 0.719 - - laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
6. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.342 - - - 0.920 - 0.711 0.711 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
7. ZC3H4 ENSDARG00000078355 1888 2.337 - - - 0.747 - 0.839 0.751 - - zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
8. smo ENSDARG00000002952 6411 2.315 - - - 0.844 - 0.768 0.703 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
9. CDK5R1 CDK5R1 562 2.27 0.708 - - 0.830 - - 0.732 - -
10. marcksa ENSDARG00000004049 2518 2.264 - - - 0.825 - - 0.721 0.718 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
11. fzd3a ENSDARG00000021664 1958 2.259 0.777 - - - - 0.711 0.771 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
12. SHC3 ENSDARG00000098909 332 2.246 0.788 - - 0.709 - - 0.749 - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
13. nkx6.1 ENSDARG00000022569 3779 2.241 0.799 - - 0.705 - - 0.737 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
14. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.236 0.753 - - - - 0.738 0.745 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
15. wu:fb30e12 wu:fb30e12 1254 2.232 - 0.760 - 0.706 - - 0.766 - -
16. gfra1b ENSDARG00000102564 821 2.201 0.704 - - - - 0.782 0.715 - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
17. hoxd9a ENSDARG00000059274 3414 2.198 0.708 - - - - 0.713 0.777 - - homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
18. scoca ENSDARG00000087333 1739 1.846 - - - 0.903 - - - - 0.943 short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
19. CU929394.1 CU929394.1 405 1.755 - 0.794 - - - - - - 0.961
20. klf7a ENSDARG00000073857 1226 1.749 - - - 0.806 - - - - 0.943 Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
21. CABZ01038514.1 CABZ01038514.1 724 1.732 - 0.803 - 0.929 - - - - -
22. lhfpl2b_1 ENSDARG00000098153 1596 1.732 - - - 0.767 - - - - 0.965 LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
23. siah1 ENSDARG00000030871 1590 1.72 - - - - - - 0.769 - 0.951 siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
24. C11H19orf25 C11H19orf25 491 1.715 - - - 0.735 - - - - 0.980
25. aacs ENSDARG00000012468 1138 1.712 - - - - - - 0.755 - 0.957 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
26. si:ch73-7i4.1 ENSDARG00000094554 771 1.691 0.749 - - - - - - - 0.942 si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
27. RIBC2 ENSDARG00000075177 445 1.684 - 0.729 - - - - - - 0.955 RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
28. dpysl5b ENSDARG00000059311 600 1.68 - - - - - - 0.714 - 0.966 dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
29. st18 663 1.678 - - - 0.875 - - 0.803 - - suppression of tumorigenicity 18, zinc finger
30. ptk6b ENSDARG00000059956 44 1.675 - 0.823 - 0.852 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
31. msl2a ENSDARG00000038909 1357 1.665 - - - - - 0.824 0.841 - - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
32. ncana 1537 1.655 - - - - - - 0.717 - 0.938 neurocan a
33. rapgef2 ENSDARG00000005482 2586 1.654 - - - - - - 0.761 - 0.893 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
34. vgf ENSDARG00000105529 247 1.653 0.864 - - - - - 0.789 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
35. gipc1 ENSDARG00000104483 2913 1.649 - - - 0.791 - - - - 0.858 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
36. sfi1 ENSDARG00000053992 1075 1.647 - 0.773 - 0.874 - - - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
37. ttyh2 ENSDARG00000016934 1868 1.647 - 0.828 - - - - 0.819 - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
38. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.64 - 0.707 - - - - - - 0.933 nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
39. CABZ01051991.1 CABZ01051991.1 346 1.634 - - - 0.858 - - 0.776 - -
40. epha3l epha3l 1441 1.634 0.895 - - - - - 0.739 - -
41. trappc2 ENSDARG00000097660 760 1.633 - 0.829 - 0.804 - - - - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
42. hoxa9b ENSDARG00000056819 3081 1.632 - - - - - 0.806 0.826 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
43. kidins220b ENSDARG00000017338 1937 1.627 - - - - - - 0.701 - 0.926 kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
44. slc12a5b ENSDARG00000078187 329 1.626 0.902 - - - - - 0.724 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
45. NHSL1 NHSL1 182 1.625 0.749 - - 0.876 - - - - -
46. SLC5A7 SLC5A7 453 1.624 0.907 - - - - - 0.717 - -
47. ctbp2 ctbp2 3255 1.623 - - - - - 0.786 - - 0.837
48. atp1b4 ENSDARG00000053262 1337 1.613 - - - 0.857 - - 0.756 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
49. si:ch211-10a23.2 ENSDARG00000060656 471 1.611 - - - 0.872 - - 0.739 - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
50. TDG TDG 1191 1.61 - 0.755 - 0.855 - - - - -
51. PPP1R9B PPP1R9B 855 1.603 0.790 - - - - - 0.813 - -
52. rad21a ENSDARG00000006092 393 1.602 - 0.811 - - - 0.791 - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
53. SYNGAP1_1 SYNGAP1_1 66 1.602 0.749 - - 0.853 - - - - -
54. eef1a1a ENSDARG00000039502 234 1.601 0.745 - - 0.856 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
55. smad5 ENSDARG00000037238 1684 1.6 - 0.743 - - - - - - 0.857 SMAD family member 5 [Source:ZFIN;Acc:ZDB-GENE-990603-9]
56. olig2 ENSDARG00000040946 1405 1.6 0.845 - - - - - 0.755 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
57. gad2 ENSDARG00000015537 724 1.598 0.816 - - - - - 0.782 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
58. anapc7 ENSDARG00000063005 1139 1.596 - 0.725 - 0.871 - - - - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
59. adam23a ENSDARG00000062323 580 1.595 - - - 0.815 - - 0.780 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
60. slc6a1b ENSDARG00000039647 1301 1.593 0.873 - - - - - 0.720 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
61. rnf8 ENSDARG00000044949 751 1.589 0.750 - - - - - 0.839 - - ring finger protein 8, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-849]
62. syngr3a ENSDARG00000014871 405 1.588 - - - 0.858 - - 0.730 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
63. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.588 0.865 - - - - - 0.723 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
64. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.587 - - - - - - 0.706 - 0.881 regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
65. atp1b2a ENSDARG00000099203 4010 1.586 - - - 0.726 - - 0.860 - - ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
66. PRKAR2B ENSDARG00000036446 812 1.585 0.865 - - - - - 0.720 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
67. C8H1orf106 C8H1orf106 2690 1.585 - - - 0.825 - - 0.760 - -
68. PCYOX1L ENSDARG00000069003 420 1.581 - 0.762 - - - - 0.819 - - prenylcysteine oxidase 1 like [Source:ZFIN;Acc:ZDB-GENE-141212-302]
69. pdzrn4 ENSDARG00000045687 362 1.578 - - - - - 0.819 0.759 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
70. dcp1a ENSDARG00000100136 714 1.573 - - - 0.850 - 0.723 - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
71. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.573 - - - - - 0.757 0.816 - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
72. mb21d2a mb21d2a 421 1.571 - - - 0.870 - - 0.701 - -
73. iqcb1 ENSDARG00000101032 310 1.569 - - - 0.841 - - 0.728 - - IQ motif containing B1 [Source:ZFIN;Acc:ZDB-GENE-041212-47]
74. CHL1 CHL1 1553 1.568 0.865 - - - - - 0.703 - -
75. ptprna ENSDARG00000058646 1327 1.567 - - - - - 0.796 0.771 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
76. TAF2 ENSDARG00000102307 1401 1.567 - - - 0.866 - 0.701 - - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
77. uvrag ENSDARG00000023815 424 1.563 - 0.716 - 0.847 - - - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
78. hectd2 ENSDARG00000061194 559 1.563 0.824 - - - - - 0.739 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
79. cwc25 ENSDARG00000003382 2134 1.563 - - - 0.847 - 0.716 - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
80. prrt1 ENSDARG00000062208 368 1.562 - - - - - 0.809 0.753 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
81. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.562 - - - 0.858 - - 0.704 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
82. ZFHX3 ENSDARG00000103057 7759 1.561 - - - 0.755 - - 0.806 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
83. SLC2A13 SLC2A13 74 1.56 - 0.789 - - - - 0.771 - -
84. EFCC1 ENSDARG00000077826 1359 1.557 0.792 - - - - 0.765 - - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
85. prkx ENSDARG00000060716 530 1.556 - 0.780 - 0.776 - - - - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
86. BX539313.3 ENSDARG00000098016 638 1.554 - - 0.700 0.854 - - - - -
87. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.553 0.845 - - - - - 0.708 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
88. CPEB2 ENSDARG00000052604 2646 1.552 - - - 0.769 - 0.783 - - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
89. dld ENSDARG00000020219 4928 1.55 0.793 - - - - - 0.757 - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
90. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.549 - - - 0.802 - - 0.747 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
91. golga7ba ENSDARG00000036295 1460 1.548 0.790 - - - - - 0.758 - - golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
92. lingo2 lingo2 67 1.545 0.749 0.796 - - - - - - -
93. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.543 - - - 0.843 - - 0.700 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
94. C19H7orf41 C19H7orf41 2243 1.543 - - - 0.813 - - 0.730 - -
95. ZNF281 ZNF281 1946 1.542 - - - 0.734 - - 0.808 - -
96. smarce1 ENSDARG00000016871 9628 1.541 - - - - - 0.840 0.701 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
97. C2CD4A ENSDARG00000061416 61 1.541 0.801 - - - - - 0.740 - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
98. GNAL ENSDARG00000045415 568 1.537 - 0.726 - 0.811 - - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
99. mapre1b ENSDARG00000002659 9119 1.536 - - - - - 0.774 - 0.762 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
100. MPP3_1 MPP3_1 88 1.536 0.832 - - - - - 0.704 - -

There are 2044 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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