Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for casq1b

Gene Name Gene ID Reads Annotation
casq1b ENSDARG00000018105 2643 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]










Genes with expression patterns similar to casq1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. casq1b ENSDARG00000018105 2643 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
2. mybpc2b ENSDARG00000021265 9618 5.618 0.764 0.884 0.731 0.796 - - 0.894 0.727 0.822 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
3. atp2a1 ENSDARG00000020574 291561 5.379 0.811 - 0.778 0.754 0.791 - 0.767 0.715 0.763 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
4. chrnd ENSDARG00000019342 2728 5.052 0.839 0.761 - - - 0.985 0.915 0.832 0.720 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
5. tnnt2d ENSDARG00000002988 7590 4.86 0.752 0.823 0.815 - - - 0.908 0.750 0.812 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
6. pygmb ENSDARG00000013317 5454 4.786 - 0.736 - 0.720 0.788 - 0.903 0.818 0.821 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
7. eno3 ENSDARG00000039007 11355 4.71 - 0.806 0.777 0.713 0.774 - 0.844 - 0.796 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
8. tnnt3a ENSDARG00000030270 112506 4.631 0.837 - 0.727 0.706 0.703 - 0.795 - 0.863 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
9. myhz1.3 ENSDARG00000067997 155509 4.471 0.807 - 0.758 0.721 0.755 - - 0.725 0.705 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
10. hhatla ENSDARG00000039051 6598 4.337 0.816 0.859 - - - - 0.953 0.877 0.832 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
11. sh3bgr ENSDARG00000021633 3498 4.209 0.877 0.767 - - - - 0.953 0.889 0.723 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
12. usp28 ENSDARG00000008880 1850 4.188 0.813 0.733 0.731 - - 0.987 0.924 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
13. pygma ENSDARG00000055518 15972 4.152 0.839 0.843 - - 0.761 - 0.936 - 0.773 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
14. pvalb4 ENSDARG00000024433 35736 4.132 0.868 - 0.724 0.850 0.765 - 0.925 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
15. myoz2a ENSDARG00000012311 1373 4.081 0.811 0.777 - - - - 0.921 0.804 0.768 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
16. si:ch211-114n24.7 si:ch211-114n24.7 2544 4.066 0.795 0.858 - 0.725 0.764 - 0.924 - -
17. trim55a ENSDARG00000029596 2858 4.065 0.797 0.828 - - - - 0.901 0.787 0.752 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
18. srl ENSDARG00000104587 11126 4.011 0.801 0.803 0.737 0.709 - - 0.961 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
19. jph2 ENSDARG00000028625 6706 4.01 0.739 - - 0.752 0.721 - 0.951 - 0.847 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
20. CR847973.1 ENSDARG00000115516 8754 3.981 0.738 - - 0.754 - - 0.899 0.836 0.754
21. tpma ENSDARG00000033683 752432 3.947 0.808 - 0.766 0.834 0.720 - 0.819 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
22. trdn ENSDARG00000041779 4283 3.934 0.794 0.761 0.731 - - - 0.901 - 0.747 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
23. MYOM1 MYOM1 3870 3.931 0.730 0.785 0.745 - - - 0.931 - 0.740
24. ryr3 ENSDARG00000071331 6795 3.896 0.750 0.818 - - 0.702 - 0.905 - 0.721 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
25. chrna1 ENSDARG00000009021 2931 3.887 0.712 0.811 - - - - 0.922 0.738 0.704 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
26. si:ch211-226o13.2 84923 3.852 - - 0.731 0.774 0.771 - - 0.706 0.870 si:ch211-226o13.2
27. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.757 0.779 - - 0.783 0.700 - - 0.728 0.767 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
28. epyc ENSDARG00000056950 7783 3.652 0.750 0.733 - - 0.729 - 0.724 - 0.716 epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
29. ryr1b ENSDARG00000023797 5693 3.501 - 0.802 - - - 0.942 0.945 - 0.812 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
30. pcmt ENSDARG00000015201 5132 3.448 - 0.806 - - - 0.985 0.911 - 0.746 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
31. txlnbb ENSDARG00000076241 6396 3.442 0.821 0.844 - - - - 0.922 - 0.855 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
32. PTPLA PTPLA 4044 3.423 0.847 0.811 - - - - 0.927 - 0.838
33. BX294434.1 ENSDARG00000061272 6493 3.406 0.761 0.856 - - - - 0.947 - 0.842 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
34. CU633479.5 ENSDARG00000114818 1815 3.362 0.907 0.792 - - - - 0.923 0.740 -
35. cap2 ENSDARG00000104478 3266 3.335 0.797 0.792 - - - - 0.934 - 0.812 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
36. myod1 ENSDARG00000030110 6019 3.315 0.759 0.835 - - - - 0.952 - 0.769 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
37. hspg2 ENSDARG00000076564 3440 3.304 0.815 0.850 - - - - 0.903 0.736 - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
38. mdh1b ENSDARG00000018008 3196 3.282 0.809 - - 0.720 - - 0.969 - 0.784 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
39. si:ch211-156j16.1 ENSDARG00000092035 7441 3.271 0.825 - - 0.733 - - 0.975 - 0.738 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
40. tgm2a ENSDARG00000070157 4516 3.267 0.840 - - - 0.729 - 0.930 - 0.768 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
41. rtn2a ENSDARG00000016088 12184 3.254 0.797 - - 0.730 0.760 - 0.967 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
42. znf106a ENSDARG00000016651 6049 3.253 0.718 0.761 - - - - 0.930 - 0.844 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
43. adss ENSDARG00000002071 5497 3.233 0.757 - - - - - 0.930 0.808 0.738 adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
44. CR354540.2 ENSDARG00000117517 18452 3.23 0.829 - 0.734 - - - 0.909 - 0.758
45. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 3.229 0.845 0.851 - - - - - 0.703 0.830 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
46. actn3b ENSDARG00000001431 15747 3.228 0.854 0.817 0.742 0.815 - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
47. eef2l2 ENSDARG00000035256 6815 3.223 0.795 0.846 - 0.814 - - 0.768 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
48. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 3.221 0.838 0.774 - - 0.754 - - - 0.855 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
49. fitm1 ENSDARG00000056464 1759 3.195 0.724 0.879 - - - - 0.891 - 0.701 fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
50. jph1a ENSDARG00000058603 2852 3.191 - 0.756 - - - - 0.929 0.786 0.720 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
51. tnnt3b ENSDARG00000068457 101827 3.184 - 0.888 0.774 0.803 - - - 0.719 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
52. vcl vcl 6667 3.175 0.810 0.813 0.785 - - - - - 0.767
53. cmya5 ENSDARG00000061379 1423 3.17 0.713 0.738 - - - - 0.936 - 0.783 cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
54. casq2 ENSDARG00000008982 21802 3.16 0.849 - 0.805 0.726 0.780 - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
55. klhl41a ENSDARG00000068888 1034 3.155 0.732 0.739 - - - 0.980 - 0.704 - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
56. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.145 0.742 - 0.718 - - - 0.930 - 0.755 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
57. TRIM63 TRIM63 1600 3.127 0.724 0.766 - - - - 0.929 0.708 -
58. BX530018.3 ENSDARG00000107022 614 3.124 0.738 0.717 - - - - 0.887 - 0.782
59. mir133b_1 671 3.111 0.725 0.759 - - - - 0.846 0.781 - microRNA 133b
60. tgm1l1 ENSDARG00000102106 1437 3.108 0.793 0.842 - - - - 0.772 - 0.701 transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
61. mylz3 ENSDARG00000017441 303597 3.105 0.780 - - - 0.794 - 0.742 - 0.789 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
62. arpp21 ENSDARG00000061081 892 3.104 0.860 0.729 - - - - 0.742 0.773 - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
63. mylpfb ENSDARG00000002589 70167 3.101 - 0.852 0.748 0.760 0.741 - - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
64. jph1b ENSDARG00000038826 7416 3.099 - 0.840 0.748 - - - 0.749 0.762 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
65. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.084 0.727 - - 0.739 0.827 - - - 0.791 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
66. znf648 ENSDARG00000104823 1918 3.08 0.768 0.705 - - - - 0.857 - 0.750 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
67. ank1 ank1 5209 3.076 0.834 0.723 - - 0.728 - - - 0.791
68. tnni2a.4 ENSDARG00000029069 122344 3.059 0.838 - 0.740 - 0.737 - - - 0.744 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
69. apobec2a ENSDARG00000018881 4790 2.993 0.715 0.860 - 0.709 - - - - 0.709 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
70. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 2.962 0.731 0.706 - - - - 0.811 - 0.714 neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
71. ckmb ENSDARG00000040565 505935 2.901 0.735 - 0.704 0.717 0.745 - - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
72. BX324201.1 BX324201.1 3302 2.705 0.783 - - - - 0.976 0.946 - -
73. MUSTN1 MUSTN1 1882 2.69 0.847 0.891 - - - - 0.952 - -
74. C13H10orf71 3489 2.677 0.881 0.880 - - - - 0.916 - - chromosome 13 C10orf71 homolog
75. sptb ENSDARG00000030490 7128 2.646 0.841 0.853 - - - - 0.952 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
76. serpinf1 ENSDARG00000069048 2083 2.639 - 0.730 - - - 0.989 0.920 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
77. prx ENSDARG00000017246 6183 2.604 0.824 0.842 - - - - 0.938 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
78. NRAP ENSDARG00000009341 3565 2.603 0.835 0.823 - - - - 0.945 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
79. murcb murcb 13655 2.596 0.851 - - 0.791 - - 0.954 - -
80. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.584 0.757 - - - - - 0.977 - 0.850 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
81. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.573 - 0.787 - - - - 0.939 - 0.847 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
82. TMPO TMPO 3264 2.572 0.834 0.798 - - - - 0.940 - -
83. txn2 ENSDARG00000034777 4071 2.558 - 0.750 - - - 0.978 0.830 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
84. klhl41b ENSDARG00000006757 10762 2.55 0.806 - - - - - 0.971 - 0.773 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
85. zgc:92113 1738 2.55 0.771 - - - - - 0.954 - 0.825 zgc:92113
86. zgc:92518 ENSDARG00000016343 3837 2.546 0.851 - - - - - 0.963 - 0.732 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
87. txnipb ENSDARG00000070000 2365 2.539 - 0.857 - - - - 0.905 - 0.777 thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
88. smtnl1 ENSDARG00000041257 7410 2.537 0.847 - - 0.755 - - 0.935 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
89. nexn ENSDARG00000057317 10972 2.532 0.806 - - - - - 0.953 - 0.773 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
90. pbxip1a ENSDARG00000071015 4960 2.527 0.820 0.779 - - - - 0.928 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
91. COL22A1 COL22A1 4473 2.517 - 0.750 - - 0.805 - 0.962 - -
92. hapln1a ENSDARG00000089769 12334 2.51 0.771 0.846 - - - - 0.893 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
93. PHB2 PHB2 3755 2.502 0.845 0.839 - - - - 0.818 - -
94. ITGB1BP2 ENSDARG00000030176 2472 2.501 0.853 0.754 - - - - 0.894 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
95. EHBP1L1 EHBP1L1 2500 2.499 0.740 0.813 - - - - 0.946 - -
96. si:ch1073-184j22.2 ENSDARG00000078598 707 2.495 - 0.879 - - - - 0.815 0.801 - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
97. gypc ENSDARG00000041546 1487 2.489 0.749 0.813 - - - - 0.927 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
98. mybphb ENSDARG00000003081 5208 2.488 - 0.802 - - - - 0.910 - 0.776 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
99. zgc:158296 ENSDARG00000070923 3935 2.487 - 0.786 - - - - 0.940 - 0.761 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
100. camk2d2 ENSDARG00000014273 2840 2.486 0.787 0.858 - - - - 0.841 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]

There are 1648 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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