Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for casq1a

Gene Name Gene ID Reads Annotation
casq1a ENSDARG00000038716, ENSDARG00000116662 6300 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]










Genes with expression patterns similar to casq1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
2. ryr3 ENSDARG00000071331 6795 6.476 0.797 0.934 0.733 0.751 0.761 0.934 - 0.716 0.850 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
3. mylz3 ENSDARG00000017441 303597 5.526 0.771 - 0.717 0.835 0.818 0.749 - 0.797 0.839 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
4. tnnt2d ENSDARG00000002988 7590 5.514 0.773 0.843 0.739 0.779 0.787 0.760 - - 0.833 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
5. atp2a1 ENSDARG00000020574 291561 5.358 0.767 - 0.746 0.800 0.769 0.720 - 0.724 0.832 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
6. mybpc2b ENSDARG00000021265 9618 4.957 0.764 0.929 0.808 0.858 0.737 - - - 0.861 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
7. tnnt3a ENSDARG00000030270 112506 4.943 0.831 - 0.722 0.842 - 0.816 - 0.819 0.913 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
8. si:ch211-226o13.2 84923 4.914 - - 0.734 0.909 0.833 0.752 - 0.775 0.911 si:ch211-226o13.2
9. znf648 ENSDARG00000104823 1918 4.838 0.782 0.874 - 0.752 - 0.853 - 0.778 0.799 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
10. ptrfa ptrfa 4363 4.785 - 0.840 0.722 0.772 - 0.920 - 0.739 0.792
11. ckma ENSDARG00000035327, ENSDARG00000114671 418792 4.695 0.702 - - 0.779 0.792 0.791 - 0.786 0.845 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
12. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 4.647 0.801 - 0.767 0.700 0.793 - - 0.787 0.799 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
13. ckmb ENSDARG00000040565 505935 4.641 0.754 - - 0.815 0.741 0.800 - 0.790 0.741 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
14. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 4.355 0.823 0.923 - 0.909 - - - 0.807 0.893 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
15. prx ENSDARG00000017246 6183 4.225 0.909 0.927 0.788 0.821 - - - - 0.780 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
16. tnnt3b ENSDARG00000068457 101827 4.217 - 0.916 0.800 0.870 0.798 - - 0.833 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
17. PTPLA PTPLA 4044 4.179 0.858 0.857 - - - 0.864 - 0.764 0.836
18. myoz1b ENSDARG00000071445 13381 4.114 0.824 - - 0.884 0.711 - - 0.800 0.895 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
19. BX294434.1 ENSDARG00000061272 6493 4.111 0.814 0.915 0.718 0.773 - - - - 0.891 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
20. cap2 ENSDARG00000104478 3266 4.028 0.831 0.779 - - - 0.771 - 0.784 0.863 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
21. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 3.993 - 0.802 - 0.810 - 0.920 - 0.702 0.759 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
22. tnni2a.4 ENSDARG00000029069 122344 3.929 0.821 - - 0.712 0.789 - - 0.821 0.786 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
23. CR847973.1 ENSDARG00000115516 8754 3.923 - 0.862 0.711 0.755 - 0.801 - - 0.794
24. pkmb ENSDARG00000099860 25094 3.878 0.785 - 0.708 0.882 - - - 0.778 0.725 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
25. myoz2a ENSDARG00000012311 1373 3.871 0.777 0.818 - 0.765 - 0.759 - - 0.752 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
26. myhz1.3 ENSDARG00000067997 155509 3.802 0.824 - - 0.772 0.734 0.736 - - 0.736 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
27. epyc ENSDARG00000056950 7783 3.795 - 0.910 - 0.712 0.772 0.700 - - 0.701 epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
28. tpma ENSDARG00000033683 752432 3.769 0.814 - - 0.753 0.735 - - 0.717 0.750 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
29. MYOM2_1 MYOM2_1 4054 3.725 - 0.706 - 0.744 - 0.776 - 0.711 0.788
30. NRAP ENSDARG00000009341 3565 3.45 0.826 0.942 - 0.798 - 0.884 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
31. txlnbb ENSDARG00000076241 6396 3.36 0.851 0.846 - - - 0.910 - - 0.753 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
32. SYNPO2L SYNPO2L 6697 3.346 0.741 - - 0.808 - 0.930 - - 0.867
33. smyd2b ENSDARG00000005629 8181 3.345 0.811 0.865 - - - 0.905 - - 0.764 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
34. AIMP1 ENSDARG00000060036 4136 3.329 0.807 0.846 - - - 0.862 - - 0.814 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
35. trdn ENSDARG00000041779 4283 3.327 0.802 0.852 - - - 0.884 - - 0.789 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
36. ttnb ttnb 73721 3.315 - - - 0.860 - 0.921 - 0.758 0.776
37. pygma ENSDARG00000055518 15972 3.315 0.814 0.891 - - 0.799 - - - 0.811 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
38. hhatla ENSDARG00000039051 6598 3.314 0.783 0.871 - 0.746 - - - - 0.914 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
39. si:ch211-255p10.3 ENSDARG00000096616 8336 3.303 - - 0.792 0.816 - 0.868 - - 0.827 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
40. CR392006.1 CR392006.1 1401 3.277 0.812 0.871 - - - 0.837 - - 0.757
41. myod1 ENSDARG00000030110 6019 3.268 0.769 0.844 - - - 0.896 - - 0.759 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
42. CR354540.2 ENSDARG00000117517 18452 3.268 0.848 - - 0.756 - - - 0.839 0.825
43. mylpfb ENSDARG00000002589 70167 3.246 - 0.851 - 0.897 - 0.759 - 0.739 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
44. jph1a ENSDARG00000058603 2852 3.227 - 0.786 - 0.785 - 0.902 - - 0.754 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
45. casq1b ENSDARG00000018105 2643 3.221 0.838 0.774 - - 0.754 - - - 0.855 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
46. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.213 0.710 0.871 - - - - - 0.757 0.875 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
47. EHBP1L1 EHBP1L1 2500 3.166 0.822 0.784 - 0.721 - 0.839 - - -
48. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 3.157 - - 0.737 0.882 0.777 - - - 0.761 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
49. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 3.155 0.801 - - - 0.704 0.838 - 0.812 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
50. trim55a ENSDARG00000029596 2858 3.137 0.821 0.846 - - - 0.711 - - 0.759 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
51. rtn2a ENSDARG00000016088 12184 3.125 0.817 - - 0.748 0.777 - - 0.783 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
52. mdh1b ENSDARG00000018008 3196 3.123 0.804 0.712 - - - 0.803 - - 0.804 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
53. CU463857.1 CU463857.1 5541 3.121 - - - - - 0.897 0.767 0.753 0.704
54. rtn2b ENSDARG00000057027 1391 3.114 - 0.790 - 0.783 - 0.777 - - 0.764 reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
55. sh3bgr ENSDARG00000021633 3498 3.105 0.747 0.804 - - - 0.831 - - 0.723 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
56. eno3 ENSDARG00000039007 11355 3.103 - 0.806 - 0.753 0.722 - - - 0.822 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
57. znf106a ENSDARG00000016651 6049 3.082 0.702 0.796 - - - - - 0.744 0.840 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
58. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 3.071 - - - 0.765 0.702 0.890 - 0.714 - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
59. sucla2 ENSDARG00000005359 5992 3.055 0.751 0.751 - - - 0.834 - - 0.719 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
60. PBLD_1 PBLD_1 585 3.042 - 0.709 - - - 0.899 - 0.709 0.725
61. PPP1R27 PPP1R27 646 3.027 - - - 0.718 - 0.797 - 0.810 0.702
62. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 2.996 - 0.739 0.749 - 0.743 0.765 - - - solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
63. sptb ENSDARG00000030490 7128 2.632 0.859 0.884 - - - 0.889 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
64. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.593 0.846 0.843 - - - 0.904 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
65. stac3 ENSDARG00000098883 1765 2.572 0.794 0.843 - - - 0.935 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
66. ryr1b ENSDARG00000023797 5693 2.556 - 0.864 - - - - - 0.819 0.873 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
67. si:ch211-32p8.1 si:ch211-32p8.1 3402 2.552 0.779 0.889 - - - 0.884 - - -
68. nexn ENSDARG00000057317 10972 2.549 0.845 - - - - 0.918 - - 0.786 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
69. myom1a ENSDARG00000061249 10230 2.521 - - - - - 0.890 - 0.771 0.860 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
70. klhl41b ENSDARG00000006757 10762 2.514 0.824 - - - - 0.879 - - 0.811 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
71. BX530018.3 ENSDARG00000107022 614 2.507 0.800 0.881 - - - - - - 0.826
72. chrna1 ENSDARG00000009021 2931 2.501 0.763 0.870 - - - 0.868 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
73. C13H10orf71 3489 2.496 0.816 0.909 - - - - - - 0.771 chromosome 13 C10orf71 homolog
74. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 2.495 0.836 - - 0.876 - - - 0.783 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
75. cacng1 cacng1 3118 2.485 0.810 0.872 - - - 0.803 - - -
76. IGFN1 IGFN1 5030 2.478 - 0.825 - - - - - 0.817 0.836
77. SYNPO2 SYNPO2 7382 2.468 - - - - - 0.957 - 0.704 0.807
78. neb ENSDARG00000032630, ENSDARG00000109273 19493 2.463 0.816 - - 0.801 - - - - 0.846 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
79. tgm2a ENSDARG00000070157 4516 2.461 0.841 - - - - 0.841 - - 0.779 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
80. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 2.45 0.876 0.715 - - - 0.859 - - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
81. zgc:92518 ENSDARG00000016343 3837 2.446 0.841 - - - - 0.882 - - 0.723 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
82. fitm1 ENSDARG00000056464 1759 2.445 0.737 0.813 - - - 0.895 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
83. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 2.444 - 0.943 - 0.756 - 0.745 - - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
84. smyd1b ENSDARG00000091253 4964 2.443 0.813 0.843 - - - 0.787 - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
85. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.441 - - - 0.801 - 0.819 - - 0.821 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
86. alpk3a ENSDARG00000078989 1992 2.432 0.822 0.815 - - - 0.795 - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
87. MUSTN1 MUSTN1 1882 2.43 0.779 0.851 - - - 0.800 - - -
88. tgm1l1 ENSDARG00000102106 1437 2.426 0.782 0.886 - - - 0.758 - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
89. eef2l2 ENSDARG00000035256 6815 2.423 0.822 0.851 - 0.750 - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
90. dtnba ENSDARG00000077694 5483 2.423 0.719 0.887 - - - 0.817 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
91. zgc:92113 1738 2.42 0.733 - - - - 0.850 - - 0.837 zgc:92113
92. gypc ENSDARG00000041546 1487 2.417 0.807 0.797 - - - 0.813 - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
93. obsl1b ENSDARG00000077388 2511 2.415 0.823 0.820 - - - 0.772 - - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
94. vcl vcl 6667 2.403 0.813 0.872 - - - - - - 0.718
95. zgc:158296 ENSDARG00000070923 3935 2.402 - 0.768 - - - 0.907 - - 0.727 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
96. jph1b ENSDARG00000038826 7416 2.398 - 0.878 - 0.726 - - - 0.794 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
97. klhl40a ENSDARG00000039052 2537 2.394 0.759 0.772 - - - 0.863 - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
98. xirp2a ENSDARG00000071113 7113 2.394 0.794 0.806 - - - 0.794 - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
99. murca murca 6614 2.392 0.802 - 0.716 - - 0.874 - - -
100. srl ENSDARG00000104587 11126 2.384 0.759 0.878 0.747 - - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]

There are 1226 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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