Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for casp6

Gene Name Gene ID Reads Annotation
casp6 ENSDARG00000093405, ENSDARG00000115863 11 caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]










Genes with expression patterns similar to casp6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. casp6 ENSDARG00000093405, ENSDARG00000115863 11 5 - 1.000 1.000 1.000 1.000 - - 1.000 - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
2. cobl ENSDARG00000091006 4 1.995 - 1.000 0.995 - - - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
3. cx39.4 ENSDARG00000070357 17 1.877 - 1.000 - - 0.877 - - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
4. nkiras2_1 ENSDARG00000052594 31 1.775 - 1.000 - - 0.775 - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
5. BX004964.2 BX004964.2 1 1.775 - 1.000 - - - - - 0.775 -
6. bco2b ENSDARG00000041715 13 1.774 - 0.889 0.885 - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
7. si:ch211-209j10.5 si:ch211-209j10.5 13 1.729 - - 0.954 - - - - 0.775 -
8. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
9. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
10. cdh10 cdh10 38 1 - 1.000 - - - - - - -
11. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - 1.000 - - - - - - -
12. si:dkey-42i9.8 ENSDARG00000071541 17 1 - 1.000 - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
13. SRCIN1 SRCIN1 5 1 - 1.000 - - - - - - -
14. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
15. si:ch211-113a14.15_1 2 1 - 1.000 - - - - - - - si:ch211-113a14.15
16. CDH8 172 1 - 1.000 - - - - - - - cadherin 8
17. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - 1.000 - - - - - - -
18. si:ch211-286b5.9 ENSDARG00000086166 27 1 - 1.000 - - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
19. lingo1b ENSDARG00000035899 86 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
20. APOBEC2 APOBEC2 9 1 - - 1.000 - - - - - -
21. BX548000.1 ENSDARG00000099044 45 1 - 1.000 - - - - - - -
22. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - 1.000 - - - - - - -
23. rbfox3l rbfox3l 34 1 - 1.000 - - - - - - -
24. CU570987.1 CU570987.1 7 1 - 1.000 - - - - - - -
25. foxq1a ENSDARG00000030896 121 1 - 1.000 - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
26. CABZ01084273.1 CABZ01084273.1 16 1 - 1.000 - - - - - - -
27. CU179703.1 CU179703.1 5 1 - 1.000 - - - - - - -
28. CT583679.2 CT583679.2 10 1 - 1.000 - - - - - - -
29. rims3 ENSDARG00000062305 202 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
30. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
31. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
32. CLDN20 26 1 - 1.000 - - - - - - - claudin 20, transcript variant X2
33. zeb2b ENSDARG00000078416 23 1 - 1.000 - - - - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
34. tekt1 ENSDARG00000101331 27 1 - 1.000 - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
35. camk1db ENSDARG00000017446 47 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
36. FRMPD1 34 1 - 1.000 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
37. tmem91 ENSDARG00000068456 81 1 - 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
38. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - 1.000 - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
39. si:dkey-93h22.6 si:dkey-93h22.6 7 1 - 1.000 - - - - - - -
40. fam219ab ENSDARG00000013813 591 1 - 1.000 - - - - - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
41. cyp2j20 ENSDARG00000094057 44 1 - 1.000 - - - - - - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
42. SCAMP5 SCAMP5 19 1 - 1.000 - - - - - - -
43. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
44. ACTR3_1 ACTR3_1 2 1 - 1.000 - - - - - - -
45. RIMS1 RIMS1 9 1 - 1.000 - - - - - - -
46. ccdc14 ENSDARG00000098734 3 1 - 1.000 - - - - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
47. klf5b ENSDARG00000062106 7 1 - 1.000 - - - - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
48. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
49. CLSTN2 ENSDARG00000060637 41 1 - 1.000 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
50. syt9b ENSDARG00000029239 31 1 - 1.000 - - - - - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
51. zgc:173713 17 1 - 1.000 - - - - - - - zgc:173713, transcript variant X2
52. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - 1.000 - - - - - - -
53. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
54. tecrl2 tecrl2 11 1 - 1.000 - - - - - - -
55. sst2 ENSDARG00000014190 617 1 - 1.000 - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
56. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
57. her3 ENSDARG00000076857 131 1 - 1.000 - - - - - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
58. zgc:195195 zgc:195195 6 1 - 1.000 - - - - - - -
59. PEG3_37 PEG3_37 4 1 - 1.000 - - - - - - -
60. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - 1.000 - - - - - - -
61. otpb ENSDARG00000058379 1143 1 - 1.000 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
62. PLCXD1_3 PLCXD1_3 35 1 - 1.000 - - - - - - -
63. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
64. cpeb1b ENSDARG00000008454 37 1 - 1.000 - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
65. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1 - 1.000 - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
66. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
67. KCNS3 KCNS3 82 1 - 1.000 - - - - - - -
68. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
69. USP43 USP43 14 1 - 1.000 - - - - - - -
70. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - 1.000 - - - - - - -
71. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
72. NPAS3 ENSDARG00000109820 362 1 - 1.000 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
73. zgc:113691 ENSDARG00000038898 36 1 - 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
74. porcn ENSDARG00000052558, ENSDARG00000111556 110 1 - 1.000 - - - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
75. AL935186.3 ENSDARG00000109223 19 1 - 1.000 - - - - - - -
76. rereb ENSDARG00000075670 136 1 - 1.000 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
77. zgc:110434 21 1 - 1.000 - - - - - - - zgc:110434
78. abcc6a ENSDARG00000016750 10 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
79. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - 1.000 - - - - - - -
80. U6_20 U6_20 0 1 - 1.000 - - - - - - -
81. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
82. U6_32 U6_32 0 1 - 1.000 - - - - - - -
83. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
84. mybl1 ENSDARG00000030999 158 1 - 1.000 - - - - - - - v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
85. aspn ENSDARG00000002192 218 1 - 1.000 - - - - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
86. cant1b ENSDARG00000102977 1 1 - 1.000 - - - - - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
87. hcst ENSDARG00000092074 172 1 - 1.000 - - - - - - - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
88. ifit2 ifit2 11 1 - 1.000 - - - - - - -
89. ascc2 ENSDARG00000013058 228 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
90. si:dkey-285e18.6 ENSDARG00000098144 1 1 - 1.000 - - - - - - - si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
91. NTRK3 NTRK3 163 1 - 1.000 - - - - - - -
92. si:ch211-138k19.2 si:ch211-138k19.2 398 1 - 1.000 - - - - - - -
93. CU914780.1 ENSDARG00000114023 105 1 - 1.000 - - - - - - -
94. CR391967.1 CR391967.1 135 1 - 1.000 - - - - - - -
95. CMAS CMAS 10 1 - 1.000 - - - - - - -
96. cyp17a2 ENSDARG00000053966 1 1 - 1.000 - - - - - - - cytochrome P450, family 17, subfamily A, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-100822-1]
97. cyp46a4 cyp46a4 5 1 - 1.000 - - - - - - -
98. kif17 ENSDARG00000055238 12 1 - 1.000 - - - - - - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
99. SNORA14 SNORA14 10 1 - 1.000 - - - - - - -
100. INTU ENSDARG00000077639 158 1 - 1.000 - - - - - - - inturned planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-110914-91]

There are 555 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA