Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for casp3b

Gene Name Gene ID Reads Annotation
casp3b ENSDARG00000055045 54 caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]










Genes with expression patterns similar to casp3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. casp3b ENSDARG00000055045 54 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
2. MAGI3 MAGI3 114 2.442 0.977 - - - - 0.751 - 0.714 -
3. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1.981 0.981 - - - 1.000 - - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
4. trim35-29 ENSDARG00000055730 24 1.974 - - - - - 0.974 1.000 - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
5. cacng6a ENSDARG00000036457 344 1.946 0.979 0.967 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
6. si:dkeyp-123a12.2 ENSDARG00000115029 78 1.94 0.987 0.953 - - - - - - - si:dkeyp-123a12.2 [Source:ZFIN;Acc:ZDB-GENE-041210-271]
7. si:ch211-281g2.4 si:ch211-281g2.4 121 1.929 0.976 - - - - 0.953 - - -
8. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 1.92 - 0.985 - - - 0.935 - - - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
9. XCR1 XCR1 9 1.919 - - 0.919 - - - 1.000 - -
10. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1.908 - - 0.908 - - - 1.000 - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
11. WIPF1 WIPF1 32 1.88 - - 0.880 - - - 1.000 - -
12. si:ch211-51h9.7 ENSDARG00000074720 227 1.817 0.912 0.905 - - - - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
13. AKNA ENSDARG00000087110 39 1.791 0.846 - - - - 0.945 - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
14. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 1.789 - 0.983 - - - 0.806 - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
15. ebf1b ENSDARG00000069196 64 1.763 - - - - - - 1.000 0.763 - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
16. six2a ENSDARG00000058004, ENSDARG00000115214 414 1.757 0.799 0.958 - - - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
17. plce1 ENSDARG00000087921 44 1.756 - 0.977 - - - - - - 0.779 phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
18. nudt5 ENSDARG00000078073 779 1.755 - 0.919 - - - 0.836 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
19. uevld ENSDARG00000009266, ENSDARG00000116754 377 1.751 0.769 0.982 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
20. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 1.746 - - - - - 0.974 - 0.772 - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
21. BX000999.4_1 BX000999.4_1 222 1.745 - 0.964 - - - - 0.781 - -
22. gpr112b gpr112b 28 1.744 - - 0.770 - - 0.974 - - -
23. tmem37 ENSDARG00000059305 19 1.739 - - - - 0.739 - 1.000 - - transmembrane protein 37 [Source:ZFIN;Acc:ZDB-GENE-040426-2208]
24. xpnpep2 ENSDARG00000026017 16 1.736 0.995 - - - - - 0.741 - - X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound [Source:ZFIN;Acc:ZDB-GENE-040426-1151]
25. plekhg6 ENSDARG00000086056 368 1.73 0.748 0.982 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
26. ftr14 ENSDARG00000053293 77 1.723 0.865 - - - - 0.858 - - - finTRIM family, member 14 [Source:ZFIN;Acc:ZDB-GENE-060512-201]
27. dlx2a ENSDARG00000079964 1253 1.717 - 0.822 - - - 0.895 - - - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
28. trabd ENSDARG00000010445 195 1.707 0.855 - - - - 0.852 - - - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
29. ror1 ENSDARG00000015176 378 1.698 0.811 - - - - 0.887 - - - receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
30. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 1.697 - 0.980 - - - 0.717 - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
31. IL17RA_1 IL17RA_1 39 1.693 - - 0.744 - - 0.949 - - -
32. GCNT4 GCNT4 66 1.689 0.815 - - - - 0.874 - - -
33. tsen54 ENSDARG00000036844 11 1.683 - - 0.929 - - - - - 0.754 TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
34. MAL_1 MAL_1 200 1.678 0.977 - - - - 0.701 - - -
35. acvrl1 ENSDARG00000018179 308 1.675 0.967 - - - - - - 0.708 - activin A receptor like type 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
36. stx5a ENSDARG00000025033, ENSDARG00000112598 380 1.67 0.751 0.919 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
37. ormdl3 ENSDARG00000025555, ENSDARG00000110450 70 1.659 0.897 - - - - - - 0.762 - ORMDL sphingolipid biosynthesis regulator 3 [Source:ZFIN;Acc:ZDB-GENE-041010-190]
38. FAM200A FAM200A 19 1.657 - - 0.876 - - - - 0.781 -
39. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.648 0.802 0.846 - - - - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
40. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 1.638 - 0.884 - - - 0.754 - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
41. PRSS16 ENSDARG00000076602 963 1.629 - 0.813 - - - 0.816 - - - serine protease 16 [Source:ZFIN;Acc:ZDB-GENE-070112-732]
42. fosb ENSDARG00000055751 170 1.624 0.731 0.893 - - - - - - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
43. PTGFRN_1 ENSDARG00000075505 1447 1.622 0.843 - - - - 0.779 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
44. sass6 ENSDARG00000058346 225 1.617 0.827 - - - - 0.790 - - - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
45. apool ENSDARG00000039374, ENSDARG00000111985 482 1.617 - 0.899 - - - 0.718 - - - apolipoprotein O-like [Source:ZFIN;Acc:ZDB-GENE-050327-76]
46. TBC1D24 ENSDARG00000069339 1300 1.609 0.879 - - - - 0.730 - - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
47. pkhd1l1 ENSDARG00000091116 23 1.605 - - - - 0.737 0.868 - - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
48. wdr37 ENSDARG00000074611 468 1.6 0.705 0.895 - - - - - - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
49. irs1 ENSDARG00000054087 1809 1.593 0.760 - - - - 0.833 - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
50. babam1 ENSDARG00000077526 776 1.592 0.780 0.812 - - - - - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
51. chordc1 chordc1 548 1.59 0.757 0.833 - - - - - - -
52. grhl3 ENSDARG00000078552 897 1.586 - 0.850 - - - 0.736 - - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
53. ttpa ENSDARG00000027584 640 1.575 - 0.841 - - - 0.734 - - - tocopherol (alpha) transfer protein [Source:ZFIN;Acc:ZDB-GENE-030131-4631]
54. mxra5a ENSDARG00000074815 628 1.565 0.850 - - - - 0.715 - - - matrix-remodelling associated 5a [Source:ZFIN;Acc:ZDB-GENE-090312-22]
55. pcgf6 ENSDARG00000069681 2382 1.548 - 0.787 - - - 0.761 - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
56. proc proc 1038 1.535 0.724 0.811 - - - - - - -
57. stx7l ENSDARG00000069208, ENSDARG00000112283 343 1.528 - - - - - 0.812 - 0.716 - syntaxin 7-like [Source:ZFIN;Acc:ZDB-GENE-041014-35]
58. zgc:101664 ENSDARG00000035700 530 1.511 - 0.791 - - - 0.720 - - - zgc:101664 [Source:ZFIN;Acc:ZDB-GENE-041010-187]
59. mid1 ENSDARG00000060482 154 1.511 - - - - - 0.736 - 0.775 - midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]
60. adamts22 adamts22 79 1.466 - - - - - 0.731 - 0.735 -
61. he1b 11900 1 - - - - - - 1.000 - - hatching enzyme 1b
62. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
63. C7H10orf112 C7H10orf112 15 1 - - - - 1.000 - - - -
64. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - 1.000 - - - - si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
65. akap1a ENSDARG00000089802 5 1 - - - - - - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
66. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -
67. MXRA5 MXRA5 58 1 - - - - - - 1.000 - -
68. BTBD17_1 BTBD17_1 42 1 - - - - - - 1.000 - -
69. si:ch211-250o15.5 si:ch211-250o15.5 1 1 - - - - - - 1.000 - -
70. Metazoa_SRP_11 Metazoa_SRP_11 3 1 - - - - 1.000 - - - -
71. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - - - - - - 1.000 - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
72. itga11b ENSDARG00000007950 17 1 - - - - 1.000 - - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
73. PLA2G10 PLA2G10 9 1 - - - - - - 1.000 - -
74. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - - - - 1.000 - - - -
75. SNORA62_2 SNORA62_2 4 1 - - - - 1.000 - - - -
76. ncs1b ENSDARG00000054186 252 1 - - - - - - 1.000 - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
77. zgc:194189 ENSDARG00000008010 26 1 - - - - - - 1.000 - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
78. CU681840.1 CU681840.1 3 1 - - - - - - 1.000 - -
79. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - 1.000 - - - -
80. mfsd10 ENSDARG00000086786 304 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
81. il17a/f3 ENSDARG00000041976 2 1 - - - - 1.000 - - - - interleukin 17a/f3 [Source:ZFIN;Acc:ZDB-GENE-041001-192]
82. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
83. BX248410.3 ENSDARG00000114678 5 1 - - - - 1.000 - - - -
84. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
85. KSR1 KSR1 8 1 - - - - - - 1.000 - -
86. atp8b5a ENSDARG00000062040 1 1 - - - - 1.000 - - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
87. NPC1L1 ENSDARG00000099558 0 1 - - - - - - 1.000 - - NPC1 like intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7898]
88. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - - 1.000 - -
89. zgc:172053 ENSDARG00000038321 9 1 - - - - 1.000 - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
90. FP103005.1 ENSDARG00000099852 4 1 - - - - 1.000 - - - -
91. zgc:173716 9 1 - - - - - - 1.000 - - zgc:173716
92. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 1 - - - - - - 1.000 - - moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
93. gramd4 gramd4 4 1 - - - - 1.000 - - - -
94. BX323819.1 BX323819.1 9 1 - - - - - - 1.000 - -
95. si:dkey-32e6.3 ENSDARG00000092934 133 1 - - - - - 1.000 - - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
96. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - 1.000 - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
97. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
98. ponzr6 ENSDARG00000036382 16 1 - - - - - - 1.000 - - plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
99. st3gal1l ENSDARG00000079310 10 1 - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
100. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - - - 1.000 - -

There are 1428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA