Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for casp3a

Gene Name Gene ID Reads Annotation
casp3a ENSDARG00000017905, ENSDARG00000113754 2819 caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]










Genes with expression patterns similar to casp3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
2. casc4 ENSDARG00000074490 2019 2.558 - 0.800 - - 0.776 - 0.982 - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
3. dpp9 ENSDARG00000052606 2279 2.443 - 0.721 - - - 0.753 0.969 - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
4. zgc:77086 ENSDARG00000014015 4908 2.363 - 0.707 - - - 0.724 0.932 - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
5. pak2b ENSDARG00000018476 4331 2.347 - 0.820 - - 0.806 - - - 0.721 p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
6. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 2.327 - 0.796 - - 0.719 - - - 0.812 actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
7. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 2.304 - 0.726 - - 0.815 - - - 0.763 B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
8. eftud2 ENSDARG00000012261 3081 2.288 - 0.806 - - 0.731 - - - 0.751 elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
9. wdr33 ENSDARG00000018272 4076 2.264 - 0.781 - - - 0.710 - - 0.773 WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
10. h2afvb ENSDARG00000116491 35692 2.25 0.721 0.742 - - - - - 0.787 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
11. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 2.25 - 0.730 - - 0.779 0.741 - - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
12. EIF4G1 EIF4G1 19676 2.233 - - - - - 0.756 0.764 - 0.713
13. rtf1 ENSDARG00000008947 6596 2.198 - - - - 0.783 0.714 - - 0.701 RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
14. auh ENSDARG00000042975 1841 1.811 - 0.836 - - - - 0.975 - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
15. gnpat ENSDARG00000074401 479 1.782 0.798 - - - - - 0.984 - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
16. hs6st2 ENSDARG00000012025 1145 1.779 - 0.802 - - - - 0.977 - - heparan sulfate 6-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-14]
17. ino80c ENSDARG00000055719 1512 1.776 - - - - 0.792 - 0.984 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
18. hdgfrp2 7462 1.776 - 0.790 - - - - 0.986 - - hepatoma-derived growth factor-related protein 2, transcript variant X1
19. gnl3 ENSDARG00000006219 3854 1.759 - 0.771 - - - - 0.988 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
20. insm1b ENSDARG00000053301 2032 1.752 - - - - - - 0.961 - 0.791 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
21. cplx4b ENSDARG00000059486 3192 1.747 - 0.771 - - - - 0.976 - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
22. mbd3a ENSDARG00000061774 4047 1.738 - 0.765 - - - - 0.973 - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
23. gadd45gip1 ENSDARG00000039338 1878 1.737 - 0.754 - - - - 0.983 - - growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
24. kif11 ENSDARG00000010948 4973 1.736 - - - - - - 0.990 - 0.746 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
25. anxa4 ENSDARG00000036456 3332 1.736 - 0.814 - - - - 0.922 - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
26. ptp4a3 ENSDARG00000039997 1964 1.723 - 0.747 - - - - 0.976 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
27. xpo1b ENSDARG00000063229 2529 1.717 - - - - 0.735 - 0.982 - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
28. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 1.708 - 0.729 - - - - 0.979 - - integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
29. C2H6orf52 C2H6orf52 2847 1.704 - 0.719 - - - - 0.985 - -
30. stx4 ENSDARG00000052518 1848 1.699 - 0.714 - - - - 0.985 - - syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
31. ralbp1 ENSDARG00000078653 2440 1.696 - 0.710 - - - - 0.986 - - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
32. eif3s10 ENSDARG00000076815 10822 1.695 - - - - - - 0.973 - 0.722 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
33. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.695 - - - - - - 0.954 0.741 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
34. MAP4K4 ENSDARG00000098670 4665 1.693 - - - - - - 0.930 - 0.763 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
35. nrf1 ENSDARG00000000018 4683 1.69 - 0.710 - - - - 0.980 - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
36. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.689 - - - - - - 0.974 0.715 - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
37. rrp7a ENSDARG00000098934 1123 1.685 - 0.701 - - - - 0.984 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
38. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.683 - 0.769 - - - - 0.914 - -
39. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 1.678 - 0.700 - - - - 0.978 - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
40. lrba ENSDARG00000031108 2136 1.671 - - - - 0.700 - 0.971 - - LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
41. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.662 - 0.716 - - - - 0.946 - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
42. wu:fk48d07 wu:fk48d07 13245 1.658 - - - - - - 0.864 - 0.794
43. kpna3 ENSDARG00000052641 5347 1.645 - 0.767 - - - 0.878 - - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
44. puf60a ENSDARG00000032175 5618 1.639 - 0.775 - - - - - - 0.864 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
45. eif2s3 ENSDARG00000008292 17051 1.639 - 0.863 - - - - 0.776 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
46. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.638 - - - - - - 0.866 - 0.772 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
47. zgc:101846 15202 1.617 - - - - - - 0.848 - 0.769 zgc:101846
48. gstp1 ENSDARG00000104068 12698 1.614 - - - - 0.759 - 0.855 - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
49. nars ENSDARG00000061100 2948 1.607 - 0.849 - - - 0.758 - - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
50. marcksa ENSDARG00000004049 2518 1.596 - - - - - - - 0.796 0.800 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
51. mapk3 ENSDARG00000070573 6842 1.595 - 0.808 - - 0.787 - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
52. sh2b1 ENSDARG00000057679, ENSDARG00000113263 2194 1.591 - 0.807 - - - - - - 0.784 SH2B adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070209-188]
53. snrpd1 ENSDARG00000011648 8615 1.588 - - - - 0.756 - - 0.832 - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
54. wdr5 ENSDARG00000016903 4834 1.588 - - - - - - 0.813 - 0.775 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
55. si:ch211-197h24.6 ENSDARG00000091631 1933 1.578 - 0.822 - - - - - - 0.756 si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
56. ybx1 ENSDARG00000004757 916 1.574 - 0.767 - - - 0.807 - - - Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]
57. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.566 - - - - - - - 0.721 0.845 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
58. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.565 - - - - 0.754 - - 0.811 - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
59. smarca5 ENSDARG00000052348 15433 1.563 - 0.787 - - - - - - 0.776 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
60. hnrnpub ENSDARG00000004735 16496 1.562 - - - - 0.746 - - - 0.816 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
61. TAF15 ENSDARG00000070019 5102 1.562 - - - - - - - 0.733 0.829 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
62. smg5 ENSDARG00000041481 1286 1.559 - 0.784 - - 0.775 - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
63. arid2 ENSDARG00000007413 4413 1.552 - 0.792 - - 0.760 - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
64. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.55 - - - - - - - 0.762 0.788 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
65. amotl2a ENSDARG00000061923 4713 1.55 - 0.813 - - 0.737 - - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
66. CREBZF ENSDARG00000089787 4261 1.549 - 0.767 - - - - - - 0.782 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
67. Sep-06 Sep-06 5465 1.542 - 0.841 - - - - - - 0.701
68. usp42 ENSDARG00000077300 926 1.534 - 0.776 - - - 0.758 - - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
69. bud31 ENSDARG00000017084 3892 1.532 - - - - - - - 0.805 0.727 BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
70. parvaa ENSDARG00000043710 3495 1.531 - - - - 0.715 - 0.816 - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
71. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 1.525 - 0.783 - - 0.742 - - - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
72. CABZ01080568.2 CABZ01080568.2 2137 1.524 - - - - 0.812 - - - 0.712
73. zbtb18 ENSDARG00000028228 3653 1.523 - - - - - - - 0.719 0.804 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
74. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.522 - - - - - - 0.761 - 0.761 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
75. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.521 - - - - 0.779 - - - 0.742 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
76. celf3a ENSDARG00000034668 2432 1.521 - - - - 0.711 - - - 0.810 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
77. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.521 - 0.767 - - - - - - 0.754 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
78. ilf2 ENSDARG00000014591 14543 1.519 - - - - - - - 0.726 0.793 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
79. uqcrc2a ENSDARG00000014794 3949 1.518 - 0.778 - - - 0.740 - - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
80. pcdh19 ENSDARG00000034344 2378 1.517 - 0.735 - - - - - - 0.782 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
81. foxp4 ENSDARG00000076120 9458 1.517 - 0.769 - - - - 0.748 - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
82. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 1.516 0.757 0.759 - - - - - - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
83. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.513 - 0.776 - - - - - - 0.737 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
84. CABZ01087568.1 CABZ01087568.1 1487 1.51 - - - - 0.729 0.781 - - -
85. cpsf5 cpsf5 1841 1.509 - 0.766 - - 0.743 - - - -
86. camlg ENSDARG00000100409 2157 1.509 - 0.781 - - - - - - 0.728 calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
87. dbnla ENSDARG00000008170 2129 1.508 - - - - 0.708 - 0.800 - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
88. her9 ENSDARG00000056438, ENSDARG00000115775 3099 1.505 - 0.727 - - 0.778 - - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
89. pou3f2a ENSDARG00000070220 817 1.5 - - - - - - - 0.709 0.791 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
90. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.499 - 0.772 - - 0.727 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
91. rab30 ENSDARG00000037884 1077 1.497 - 0.717 - - - - - - 0.780 RAB30, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-250]
92. clvs2 ENSDARG00000053122 1390 1.497 - - - - - - - 0.742 0.755 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
93. eif4h ENSDARG00000042252 6742 1.494 - 0.705 - - - - - - 0.789 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
94. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 1.494 - 0.719 - - - - - 0.775 - PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
95. nelfb ENSDARG00000035505 1337 1.493 - 0.702 - - 0.791 - - - - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
96. znf346 ENSDARG00000060695 3942 1.493 0.702 - - - - - - - 0.791 zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
97. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.491 - - - - 0.780 - - - 0.711 immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
98. zswim5 ENSDARG00000055900 4243 1.489 - - - - 0.782 - - - 0.707 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
99. mcm5 ENSDARG00000019507 6407 1.489 - 0.744 - - - - - - 0.745 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
100. raver1 ENSDARG00000052617 1189 1.486 - 0.717 - - - - - - 0.769 ribonucleoprotein, PTB-binding 1 [Source:ZFIN;Acc:ZDB-GENE-050522-99]

There are 1519 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA