Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for casc4

Gene Name Gene ID Reads Annotation
casc4 ENSDARG00000074490 2019 cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]










Genes with expression patterns similar to casc4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. casc4 ENSDARG00000074490 2019 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
2. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 2.57 - 0.718 - - - - 0.917 0.935 - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
3. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 2.558 - 0.800 - - 0.776 - 0.982 - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
4. ptp4a3 ENSDARG00000039997 1964 2.518 - 0.705 - - 0.822 - 0.991 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
5. phax ENSDARG00000044298 2302 2.477 - 0.715 - - 0.774 - 0.988 - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
6. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 2.37 - 0.760 - - 0.748 - - 0.862 - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
7. pak2b ENSDARG00000018476 4331 2.369 - 0.736 - - 0.886 0.747 - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
8. pinx1 ENSDARG00000023532 4452 2.355 - 0.726 - - 0.722 - - 0.907 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
9. foxp4 ENSDARG00000076120 9458 2.212 - 0.701 - - - 0.766 0.745 - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
10. nlk1 ENSDARG00000006566 1123 1.876 - - - - - - 0.989 0.887 - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
11. C2H6orf52 C2H6orf52 2847 1.865 - - - - - - 0.994 0.871 -
12. b2ml ENSDARG00000015887 1060 1.854 - - - - - - 0.984 0.870 - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
13. arrb2b ENSDARG00000011545 3126 1.848 - - - - - - 0.953 0.895 - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
14. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.844 - - - - - - 0.938 0.906 - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
15. mgll ENSDARG00000036820 747 1.84 - - - - 0.875 - 0.965 - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
16. rbm4.2 ENSDARG00000055080 5241 1.829 - - - - - - 0.973 0.856 - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
17. lrba ENSDARG00000031108 2136 1.827 - - - - 0.864 - 0.963 - - LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
18. ino80c ENSDARG00000055719 1512 1.822 - - - - 0.833 - 0.989 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
19. hdgfrp2 7462 1.819 - 0.831 - - - - 0.988 - - hepatoma-derived growth factor-related protein 2, transcript variant X1
20. alpi.1 ENSDARG00000015273 1712 1.819 - - - - - - 0.971 - 0.848 alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
21. CDCA4 ENSDARG00000042319 7918 1.806 - - - - - - 0.978 0.828 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
22. gnl3 ENSDARG00000006219 3854 1.794 - 0.805 - - - - 0.989 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
23. hfe2 4113 1.793 - 0.802 - - - - 0.991 - - hemochromatosis type 2
24. setbp1 ENSDARG00000093799 4499 1.787 - - - - - - 0.979 0.808 - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
25. LPL_1 LPL_1 1150 1.786 - - - - 0.883 - - 0.903 -
26. dpp9 ENSDARG00000052606 2279 1.783 - 0.809 - - - - 0.974 - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
27. ralbp1 ENSDARG00000078653 2440 1.782 - - - - - - 0.988 0.794 - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
28. CORO1C CORO1C 5554 1.778 - 0.799 - - - - 0.979 - -
29. csnk1db ENSDARG00000006125 2581 1.773 - - - - 0.800 - 0.973 - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
30. USP15 958 1.766 - 0.777 - - - - 0.989 - - ubiquitin specific peptidase 15
31. GTSE1 ENSDARG00000013719 1115 1.762 - - - - 0.877 - - 0.885 - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
32. tbc1d5 ENSDARG00000036212 2580 1.757 - - - - 0.852 - 0.905 - - TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
33. get4 ENSDARG00000024398 1818 1.756 - - - - 0.883 - - 0.873 - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
34. xpo1b ENSDARG00000063229 2529 1.754 - - - - 0.770 - 0.984 - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
35. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.75 - - - - 0.885 - - 0.865 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
36. dock7 ENSDARG00000078675 1995 1.743 - - - - 0.828 - - 0.915 - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
37. cdk16_1 ENSDARG00000032072 2031 1.735 - - - - 0.879 - - 0.856 - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
38. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.734 - - - - 0.920 - - 0.814 - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
39. gipc1 ENSDARG00000104483 2913 1.73 - 0.849 - - - - - 0.881 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
40. APOD APOD 3404 1.727 - - - - - - 0.853 - 0.874
41. kmt2bb ENSDARG00000060697 5230 1.725 - 0.735 - - - - 0.990 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
42. cryba1b ENSDARG00000053875 3256 1.725 - - - - 0.736 - 0.989 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
43. auh ENSDARG00000042975 1841 1.723 - 0.741 - - - - 0.982 - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
44. zgc:65772 zgc:65772 2092 1.721 - - - - 0.790 - - 0.931 -
45. Sep-06 Sep-06 5465 1.72 - 0.796 - - - - - 0.924 -
46. fam3c ENSDARG00000056152 3833 1.717 - - - - 0.729 - 0.988 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
47. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.715 - 0.756 - - - - 0.959 - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
48. limch1b ENSDARG00000103774 1087 1.713 - 0.759 - - - - 0.954 - - LIM and calponin homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9210]
49. smyd1b ENSDARG00000091253 4964 1.711 - 0.784 - - - - 0.927 - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
50. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 1.705 - 0.761 - - - - - - 0.944 ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
51. rrp7a ENSDARG00000098934 1123 1.701 - 0.712 - - - - 0.989 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
52. atp6v1d ENSDARG00000011175 8331 1.698 - - - - - - 0.797 0.901 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
53. PRTG PRTG 4714 1.694 - - - - - 0.710 0.984 - -
54. dnaja1l dnaja1l 1536 1.694 - 0.729 - - - - - - 0.965
55. sppl3 ENSDARG00000025220 1892 1.689 - 0.702 - - - - 0.987 - - signal peptide peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-050913-71]
56. FP236812.4 FP236812.4 1244 1.688 - 0.812 - - 0.876 - - - -
57. si:ch211-278j3.3 ENSDARG00000020284 478 1.687 - - - 0.787 0.900 - - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
58. MAP4K4 ENSDARG00000098670 4665 1.686 - - - - - 0.746 0.940 - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
59. src ENSDARG00000008107 3643 1.686 - 0.700 - - - - 0.986 - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
60. pcyt1aa ENSDARG00000011233 1985 1.675 - 0.817 - - - - - 0.858 - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
61. stx11b.1 ENSDARG00000029290, ENSDARG00000109872 2113 1.674 - - - 0.701 - - 0.973 - - syntaxin 11b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1893]
62. ivns1abpb ENSDARG00000013946 1972 1.671 - - - - 0.812 - - 0.859 - influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]
63. myoz2b ENSDARG00000037266 2139 1.666 - 0.799 - - 0.867 - - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
64. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.666 - 0.774 - - - - - 0.892 - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
65. lpl ENSDARG00000087697 2578 1.665 - - - - 0.798 - - 0.867 - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
66. dbnla ENSDARG00000008170 2129 1.664 - - - - 0.852 - 0.812 - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
67. atf4b2 atf4b2 4734 1.656 - - - - 0.779 - - 0.877 -
68. hoxa10b ENSDARG00000031337 3992 1.653 - - - - - 0.711 0.942 - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
69. AIMP1 ENSDARG00000060036 4136 1.652 - 0.746 - - - - 0.906 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
70. mybbp1a ENSDARG00000078214 2458 1.652 - 0.761 - - 0.891 - - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
71. gstp1 ENSDARG00000104068 12698 1.649 - - - - 0.821 - 0.828 - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
72. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.648 - 0.762 - - - - 0.886 - -
73. si:dkey-183n20.2 si:dkey-183n20.2 210 1.64 - - - 0.739 0.901 - - - -
74. ache ENSDARG00000031796 1985 1.64 - 0.808 - - - - - 0.832 - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
75. fermt1 ENSDARG00000052652 2394 1.637 - - - 0.740 0.897 - - - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
76. rab43 ENSDARG00000059404 1118 1.637 - 0.700 - - - - - 0.937 - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
77. farsa ENSDARG00000098825 2813 1.635 - 0.775 - - - - - 0.860 - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
78. ppap2b ppap2b 2900 1.63 - 0.752 - - - - - - 0.878
79. smc4 ENSDARG00000038882 4373 1.63 - 0.736 - - - - - 0.894 - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
80. C2CD2 ENSDARG00000105000 2573 1.627 - - - - 0.835 - 0.792 - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
81. fat1 fat1 3934 1.619 - 0.852 - - - 0.767 - - -
82. wu:fb54a03 wu:fb54a03 1722 1.619 - - - 0.703 0.916 - - - -
83. ift46 ENSDARG00000011240 2499 1.618 - 0.707 - - - - - 0.911 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
84. nadl1.1 1200 1.614 - - - - - 0.704 - 0.910 - neural adhesion molecule L1.1, transcript variant X1
85. CCDC50 ENSDARG00000105136 1695 1.613 - 0.744 - - - - - 0.869 - coiled-coil domain containing 50 [Source:ZFIN;Acc:ZDB-GENE-150115-1]
86. AP3B2 1874 1.611 - - - - - 0.712 - 0.899 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
87. ndufb6 ENSDARG00000037259 6515 1.607 - 0.774 - - - - 0.833 - - NADH:ubiquinone oxidoreductase subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1781]
88. cyb5r3 ENSDARG00000005891 4440 1.606 - - - - 0.707 - 0.899 - - cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
89. camlg ENSDARG00000100409 2157 1.604 - 0.772 - - 0.832 - - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
90. PRRT2 ENSDARG00000103588 913 1.604 - - - - - 0.700 - 0.904 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
91. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.603 - 0.733 - - 0.870 - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
92. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.602 - 0.746 - - - - - 0.856 - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
93. ppm1g ENSDARG00000075559 6516 1.602 - 0.779 - - - - - 0.823 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
94. cpsf5 cpsf5 1841 1.601 - 0.716 - - 0.885 - - - -
95. ube2nb ENSDARG00000045877 4583 1.587 - 0.824 - - 0.763 - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
96. si:dkey-28b4.8 ENSDARG00000002840 1277 1.583 - - - - 0.861 0.722 - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
97. oxct1a ENSDARG00000013063 1517 1.58 - 0.732 - - 0.848 - - - - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
98. max ENSDARG00000024844 6035 1.573 - - - - 0.793 - - 0.780 - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
99. mrps14 ENSDARG00000068305 1648 1.57 - 0.726 - - 0.844 - - - - mitochondrial ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-060825-75]
100. yth2 yth2 3716 1.568 - 0.761 - - - - - 0.807 -

There are 1947 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA